Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0472 Papaver somniferum HOM05D006539 ORTHO05D008694 4.6e-192 674.5 358 100.0
TAR371G0397 Trochodendron aralioides HOM05D006539 ORTHO05D008694 6.9e-124 448.0 388 63.1
TAR371G0750 Trochodendron aralioides HOM05D006539 ORTHO05D008694 9.1e-124 447.6 388 63.1
Nn4g23332 Nelumbo nucifera HOM05D006539 ORTHO05D008694 1.8e-119 433.3 374 63.4
GSVIVG01011483001 Vitis vinifera HOM05D006539 ORTHO05D008694 5.9e-115 418.3 373 61.4
FAN05G4473 Fragaria x ananassa HOM05D006539 ORTHO05D008694 1.5e-113 413.7 360 60.6
Prupe.3G259900 Prunus persica HOM05D006539 ORTHO05D008694 1.6e-112 410.2 374 60.4
Aqoxy3G00450 Aquilegia oxysepala HOM05D006539 ORTHO05D008694 6.1e-112 408.3 394 57.4
RcHm_v2.0_Chr2g0166661 Rosa chinensis HOM05D006539 ORTHO05D008694 1.2e-110 404.1 372 59.7
MD17G1055800 Malus domestica HOM05D006539 ORTHO05D008694 2.0e-110 403.3 371 59.3
Rhsim10G0046900 Rhododendron simsii HOM05D006539 ORTHO05D008694 9.7e-110 401.0 386 57.3
Solyc02g088540.3 Solanum lycopersicum HOM05D006539 ORTHO05D008694 1.3e-109 400.6 375 58.7
Eucgr.I01991 Eucalyptus grandis HOM05D006539 ORTHO05D008694 1.7e-109 400.2 369 61.5
Sopen02g033260 Solanum pennellii HOM05D006539 ORTHO05D008694 6.3e-109 398.3 375 58.4
vmacro05668 Vaccinium macrocarpon HOM05D006539 ORTHO05D008694 8.2e-109 397.9 388 57.0
PGR004G2004 Punica granatum HOM05D006539 ORTHO05D008694 1.4e-108 397.1 373 60.6
Manes.02G050600 Manihot esculenta HOM05D006539 ORTHO05D008694 2.4e-108 396.4 377 59.7
CAN.G206.194 Capsicum annuum HOM05D006539 ORTHO05D008694 7.0e-108 394.8 369 58.5
TWI32G0765 Tripterygium wilfordii HOM05D006539 ORTHO05D008694 7.0e-108 394.8 371 58.2
CiPaw.03G091900 Carya illinoinensis HOM05D006539 ORTHO05D008694 9.1e-108 394.4 382 60.5
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 1.2e-107 394.0 373 58.7
Peaxi162Scf00166g00943 Petunia axillaris HOM05D006539 ORTHO05D008694 2.0e-107 393.3 366 58.2
Lju41A8T108 Lonicera japonica HOM05D006539 ORTHO05D008694 3.5e-107 392.5 352 61.4
CANSAT64G0188 Cannabis sativa HOM05D006539 ORTHO05D008694 1.7e-106 390.2 374 57.8
Sabra04G0067100 Salix brachista HOM05D006539 ORTHO05D008694 8.5e-106 387.9 282 68.8
Thecc.04G090200 Theobroma cacao HOM05D006539 ORTHO05D008694 8.5e-106 387.9 358 58.4
FvH4_6g47560 Fragaria vesca HOM05D006539 ORTHO05D008694 2.5e-105 386.3 259 73.0
Potri.004G122300 Populus trichocarpa HOM05D006539 ORTHO05D008694 2.5e-105 386.3 365 58.1
Atru.chr8.368 Acer truncatum HOM05D006539 ORTHO05D008694 4.2e-105 385.6 376 56.1
Gohir.A11G071300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 7.2e-105 384.8 306 65.4
DCAR_011065 Daucus carota HOM05D006539 ORTHO05D008694 1.2e-104 384.0 362 56.6
CsaV3_3G041040 Cucumis sativus L. HOM05D006539 ORTHO05D008694 1.6e-104 383.6 367 57.8
Gorai.007G080900 Gossypium raimondii HOM05D006539 ORTHO05D008694 1.6e-104 383.6 306 65.4
EL10Ac2g03043 Beta vulgaris HOM05D006539 ORTHO05D008694 1.0e-103 380.9 319 62.1
CDE06G2615 Ceratophyllum demersum HOM05D006539 ORTHO05D008694 1.0e-103 380.9 281 66.9
ClCG10G015450 Citrullus lanatus HOM05D003516 ORTHO05D004068 1.8e-103 380.2 277 69.0
QL02p039353 Quercus lobata HOM05D006539 ORTHO05D008694 2.3e-103 379.8 278 70.1
QL02p039600 Quercus lobata HOM05D006539 ORTHO05D008694 4.0e-103 379.0 278 70.1
Oeu000853.1 Olea europaea HOM05D006539 ORTHO05D008694 8.8e-103 377.9 379 55.9
PGSC0003DMG400001350 Solanum tuberosum HOM05D006539 ORTHO05D008694 1.2e-102 377.5 278 67.6
Sc11g0004810 Simmondsia chinensis HOM05D006539 ORTHO05D008694 2.0e-102 376.7 370 58.4
Sed0012723 Sechium edule HOM05D003516 ORTHO05D004068 2.6e-102 376.3 290 65.2
AUR62018139 Chenopodium quinoa HOM05D006539 ORTHO05D008694 3.4e-102 375.9 263 70.7
Haze_14476 Corylus avellana HOM05D003516 ORTHO05D004068 3.4e-102 375.9 312 64.4
MSTRG.23905 Avicennia marina HOM05D006539 ORTHO05D008694 9.8e-102 374.4 378 56.6
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 2.8e-101 372.9 294 64.3
Lsat_1_v5_gn_4_170180 Lactuca sativa HOM05D006539 ORTHO05D008694 2.8e-101 372.9 322 59.9
Duzib264G0172 Durio zibethinus HOM05D006539 ORTHO05D008694 3.7e-101 372.5 365 57.3
CARHR197920 Cardamine hirsuta HOM05D006539 ORTHO05D008694 1.4e-100 370.5 360 56.9
THA.LOC104822345 Tarenaya hassleriana HOM05D006539 ORTHO05D008694 1.4e-100 370.5 369 54.7
HanXRQChr09g0264131 Helianthus annuus HOM05D006539 ORTHO05D008694 1.2e-99 367.5 362 58.3
Lalb_Chr10g0093241 Lupinus albus HOM05D006539 ORTHO05D008694 1.2e-99 367.5 366 56.8
arahy.Tifrunner.gnm1.ann1.YFBV2Q Arachis hypogaea HOM05D006539 ORTHO05D008694 7.7e-99 364.8 318 61.6
Cc07_g03820 Coffea canephora HOM05D006539 ORTHO05D008694 3.8e-98 362.5 281 65.8
Carub.0006s1356 Capsella rubella HOM05D006539 ORTHO05D008694 8.6e-98 361.3 367 55.0
AT5G15390 Arabidopsis thaliana HOM05D006539 ORTHO05D008694 1.1e-97 360.9 356 56.5
Migut.H00658 Erythranthe guttata HOM05D006539 ORTHO05D008694 1.5e-97 360.5 373 53.4
SalBow1G8487 Salvia bowleyana HOM05D006539 ORTHO05D008694 1.5e-97 360.5 376 54.0
Medtr7g012240 Medicago truncatula HOM05D006539 ORTHO05D008694 1.9e-97 360.1 306 61.8
Aa31LG11G14170 Aethionema arabicum HOM05D006539 ORTHO05D008694 3.3e-97 359.4 358 55.0
Gohir.D11G075300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 3.3e-97 359.4 260 70.0
Hund15564 Selenicereus undatus HOM05D006539 ORTHO05D008694 4.2e-97 359.0 245 71.4
TPR.G33480 Trifolium pratense HOM05D006539 ORTHO05D008694 1.6e-96 357.1 272 67.3
SGA_v2.0_scaffold4G02416 Striga asiatica HOM05D006539 ORTHO05D008694 2.1e-96 356.7 362 54.1
Ca_06802_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 8.0e-96 354.8 266 67.7
AL6G26250 Arabidopsis lyrata HOM05D006539 ORTHO05D008694 1.8e-95 353.6 356 54.2
Os07g0598100 Oryza sativa ssp. japonica HOM05D006539 ORTHO05D008694 5.2e-95 352.1 311 59.2
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 1.2e-94 350.9 353 54.4
FAN14G0848 Fragaria x ananassa HOM05D006539 ORTHO05D008694 4.4e-94 349.0 363 55.1
Glyma.08G241400 Glycine max HOM05D006539 ORTHO05D008694 4.4e-94 349.0 272 64.3
Phvul.008G040300 Phaseolus vulgaris HOM05D006539 ORTHO05D008694 1.8e-92 343.6 322 58.1
Zm00001eb326670 Zea mays HOM05D006539 ORTHO05D008694 2.4e-92 343.2 314 56.7
Psat3g198480 Pisum sativum HOM05D006539 ORTHO05D008694 4.1e-92 342.4 330 57.6
ATR0111G028 Amborella trichopoda HOM05D006539 ORTHO05D008694 5.4e-92 342.0 297 58.2
arahy.Tifrunner.gnm1.ann1.54MYG6 Arachis hypogaea HOM05D006539 ORTHO05D008694 5.4e-92 342.0 351 56.1
Thhalv10013964m.g Eutrema salsugineum HOM05D006539 ORTHO05D008694 9.2e-92 341.3 356 54.2
Nitab4.5_0008573g0030 Nicotiana tabacum HOM05D006539 ORTHO05D008694 1.2e-91 340.9 375 52.3
VMungo1383G3577 Vigna mungo HOM05D006539 ORTHO05D008694 1.2e-91 340.9 319 58.0
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 1.6e-91 340.5 365 54.0
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 1.6e-91 340.5 370 53.2
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 2.0e-91 340.1 364 53.6
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 7.8e-91 338.2 365 53.4
BraA10t44417Z Brassica rapa HOM05D006539 ORTHO05D008694 3.3e-89 332.8 379 52.0
HPP92_013411 Vanilla planifolia HOM05D006539 ORTHO05D008694 3.3e-89 332.8 291 59.1
Lj1g0006679 Lotus japonicus HOM05D006539 ORTHO05D008694 9.5e-89 331.3 269 63.9
unitig_899.g15160 Utricularia gibba HOM05D006539 ORTHO05D008694 9.5e-89 331.3 303 56.4
AUR62034477 Chenopodium quinoa HOM05D006539 ORTHO05D008694 1.2e-88 330.9 443 45.8
SEGI_40704 Sequoiadendron giganteum HOM05D006539 ORTHO05D008694 9.8e-78 294.7 276 53.3
MELO3C009837.2 Cucumis melo HOM05D006539 ORTHO05D008694 3.2e-76 289.7 367 49.6
FAN09G1445 Fragaria x ananassa HOM05D006539 ORTHO05D008694 7.0e-76 288.5 364 46.7
HPP92_006554 Vanilla planifolia HOM05D006539 ORTHO05D008694 1.2e-75 287.7 259 57.1
Ciclev10013894m.g Citrus clementina HOM05D006539 ORTHO05D008694 1.8e-71 273.9 279 54.5
Dinv33805 Davidia involucrata HOM05D006539 ORTHO05D008694 7.1e-68 261.9 278 55.8
Nitab4.5_0003216g0020 Nicotiana tabacum HOM05D006539 ORTHO05D008694 1.6e-67 260.8 377 44.3
AagrBONN_evm.TU.Sc2ySwM_117.170 Anthoceros agrestis HOM05D006539 ORTHO05D008694 2.1e-67 260.4 236 55.1
Pp3c12_19160 Physcomitrium patens HOM05D006539 ORTHO05D008694 2.7e-67 260.0 246 52.4
CSS0042966 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 1.2e-64 251.1 275 52.7
CSS0047989 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 1.6e-64 250.8 275 52.7
Mapoly0088s0068 Marchantia polymorpha HOM05D006539 ORTHO05D008694 2.8e-64 250.0 267 47.9
SMO228G0204 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 3.8e-61 239.6 245 48.2
SMO116G0014 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 1.1e-57 228.0 238 47.5
CBR_g38172 Chara braunii HOM05D006539 ORTHO05D008694 1.5e-57 227.6 242 48.3
arahy.Tifrunner.gnm1.ann1.B86ER2 Arachis hypogaea HOM05D006539 ORTHO05D009236 6.2e-56 222.2 202 56.9
Pp3c3_25470 Physcomitrium patens HOM05D006539 ORTHO05D008694 2.6e-46 190.3 226 43.4
HPP92_013415 Vanilla planifolia HOM05D006539 ORTHO05D008694 5.8e-46 189.1 183 55.7
Ca_06844_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 9.9e-46 188.3 155 63.2
AUR62044515 Chenopodium quinoa HOM05D006539 ORTHO05D008694 2.3e-42 177.2 114 72.8
Cre03.g169700 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D008694 5.1e-42 176.0 233 36.9
PRCOL_00002708 Prasinoderma coloniale HOM05D006539 ORTHO05D008694 1.7e-37 161.0 218 38.5
MCO16G092 Micromonas commoda HOM05D006539 ORTHO05D008694 4.6e-35 152.9 219 38.4
MD11G1144500 Malus domestica HOM05D006539 ORTHO05D008694 3.9e-34 149.8 231 43.7
MD07G1179900 Malus domestica HOM05D006539 ORTHO05D008694 1.5e-33 147.9 207 46.4
FAN02G0136 Fragaria x ananassa HOM05D006539 ORTHO05D008694 1.4e-31 141.4 120 60.8
HPP92_013416 Vanilla planifolia HOM05D006539 ORTHO05D008694 1.3e-26 124.8 99 63.6
QL02p073354 Quercus lobata HOM05D006539 ORTHO05D008694 6.3e-24 115.9 125 58.4
Ciclev10013255m.g Citrus clementina HOM05D006539 ORTHO05D008694 2.4e-23 114.0 73 75.3
CSS0026858 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D043354 2.3e-18 97.4 117 50.4
CSS0050509 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D043354 3.3e-17 93.6 127 46.5
QL02p073352 Quercus lobata HOM05D006539 ORTHO05D008694 5.9e-14 82.8 67 62.7
Cre09.g392950 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D044332 2.2e-13 80.9 217 28.6
MD07G1180000 Malus domestica HOM05D006539 ORTHO05D248072 7.2e-12 75.9 104 41.3
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 5.3e-07 59.7 142 31.0
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 2.0e-06 57.8 205 25.4


User provided reference genes

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