Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 2.3e-114 415.6 215 100.0
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 2.3e-114 415.6 215 100.0
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 5.1e-114 414.5 215 99.5
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 5.1e-114 414.5 215 99.5
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 6.9e-111 404.1 215 96.3
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 1.7e-109 399.4 215 95.3
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 5.3e-87 324.7 196 82.7
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 7.0e-87 324.3 215 75.8
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.7e-85 319.7 215 77.2
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.7e-85 319.7 215 77.2
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 3.8e-85 318.5 215 76.3
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 8.5e-85 317.4 215 76.3
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 1.5e-84 316.6 199 78.9
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 5.5e-84 314.7 215 74.0
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.6e-83 313.2 215 74.4
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 2.1e-83 312.8 203 77.3
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 2.1e-83 312.8 215 74.4
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.7e-83 312.4 215 74.4
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 3.6e-83 312.0 190 81.1
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 3.6e-83 312.0 192 78.1
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 3.6e-83 312.0 215 74.0
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 8.0e-83 310.8 215 74.4
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 1.0e-82 310.5 215 75.3
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 3.0e-82 308.9 216 71.8
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 3.0e-82 308.9 198 77.3
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 4.0e-82 308.5 215 73.5
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 5.2e-82 308.1 215 73.5
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 5.2e-82 308.1 215 74.0
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 8.8e-82 307.4 215 74.4
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.5e-81 306.6 215 74.4
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 2.0e-81 306.2 197 77.7
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 2.0e-81 306.2 181 83.4
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 2.0e-81 306.2 215 73.5
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 2.0e-81 306.2 215 74.0
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 2.6e-81 305.8 205 76.6
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.6e-81 305.8 215 72.6
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 3.3e-81 305.4 215 72.1
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 5.7e-81 304.7 215 73.0
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 9.7e-81 303.9 215 71.2
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 3.7e-80 302.0 215 72.6
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 3.7e-80 302.0 220 70.5
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 8.2e-80 300.8 215 70.2
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 1.1e-79 300.4 193 76.7
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 1.1e-79 300.4 220 70.0
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 1.4e-79 300.1 215 72.1
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 1.8e-79 299.7 193 77.7
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 3.1e-79 298.9 215 71.2
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 3.1e-79 298.9 190 77.4
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 3.1e-79 298.9 220 70.9
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 5.3e-79 298.1 223 69.1
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 7.0e-79 297.7 204 74.0
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 7.0e-79 297.7 204 74.0
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 9.1e-79 297.4 205 74.1
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 1.2e-78 297.0 215 70.2
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 2.0e-78 296.2 218 69.3
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 2.0e-78 296.2 215 70.7
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 2.0e-78 296.2 186 78.5
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 2.0e-78 296.2 214 72.9
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 2.7e-78 295.8 215 70.2
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 3.5e-78 295.4 205 74.1
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 3.5e-78 295.4 215 70.7
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 3.5e-78 295.4 215 70.7
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 3.5e-78 295.4 215 71.2
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 3.5e-78 295.4 215 71.2
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 4.5e-78 295.0 215 70.7
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 7.7e-78 294.3 215 70.7
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 1.3e-77 293.5 215 69.3
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 1.3e-77 293.5 219 70.8
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 1.3e-77 293.5 215 70.2
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 2.9e-77 292.4 194 73.7
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 6.5e-77 291.2 190 73.7
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 6.5e-77 291.2 181 78.5
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 1.9e-76 289.7 181 78.5
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 2.5e-76 289.3 215 67.4
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 4.2e-76 288.5 215 68.8
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 5.5e-76 288.1 214 70.6
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 5.5e-76 288.1 220 68.2
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 9.4e-76 287.3 215 68.4
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.6e-75 286.6 181 77.3
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 2.7e-75 285.8 216 68.1
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 3.6e-75 285.4 195 73.8
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 3.6e-75 285.4 215 67.9
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 1.0e-74 283.9 215 68.4
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 1.4e-74 283.5 215 68.4
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 1.8e-74 283.1 215 66.0
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 1.8e-74 283.1 216 67.6
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 2.3e-74 282.7 218 71.1
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 4.0e-74 282.0 215 65.6
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 5.2e-74 281.6 215 64.7
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 5.2e-74 281.6 215 67.9
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 1.2e-73 280.4 215 65.6
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 2.0e-73 279.6 218 65.1
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 2.0e-73 279.6 215 64.2
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 2.0e-73 279.6 215 64.2
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 2.0e-73 279.6 215 64.7
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 3.4e-73 278.9 218 65.1
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 3.4e-73 278.9 194 69.6
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 4.4e-73 278.5 218 67.9
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 5.7e-73 278.1 215 66.5
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 5.7e-73 278.1 215 66.5
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 5.7e-73 278.1 215 66.5
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 7.5e-73 277.7 207 67.6
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 9.8e-73 277.3 215 66.0
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 9.8e-73 277.3 216 65.7
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 2.2e-72 276.2 195 68.7
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 2.2e-72 276.2 195 68.7
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 2.8e-72 275.8 215 66.5
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 3.7e-72 275.4 215 64.7
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 3.7e-72 275.4 215 64.7
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 3.7e-72 275.4 215 64.7
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 3.7e-72 275.4 212 67.9
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 4.8e-72 275.0 215 66.5
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 1.1e-71 273.9 222 63.5
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 1.1e-71 273.9 221 64.7
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 1.1e-71 273.9 220 65.0
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 1.1e-71 273.9 221 64.3
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 3.1e-71 272.3 215 67.0
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 7.0e-71 271.2 215 64.2
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 7.0e-71 271.2 218 64.2
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 2.0e-70 269.6 204 68.1
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 2.2e-69 266.2 187 69.0
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 8.5e-69 264.2 185 67.0
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 8.5e-69 264.2 185 67.0
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 3.2e-68 262.3 187 69.0
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.6e-67 260.0 207 63.8
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 1.0e-66 257.3 185 67.6
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 2.3e-66 256.1 195 65.1
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 5.2e-66 255.0 216 61.6
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 8.8e-66 254.2 191 65.4
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 2.0e-65 253.1 185 64.9
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 4.4e-65 251.9 216 65.3
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.4e-63 246.9 209 59.8
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 6.6e-61 238.0 194 63.9
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 6.6e-61 238.0 195 64.6
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 1.1e-60 237.3 215 60.0
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 1.6e-59 233.4 196 59.7
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 3.6e-59 232.3 192 64.1
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 3.0e-58 229.2 219 55.7
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 3.0e-58 229.2 219 54.8
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 4.9e-56 221.9 215 60.9
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 5.9e-54 214.9 202 58.9
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 3.2e-47 192.6 157 61.1
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 1.4e-39 167.2 98 79.6
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 7.1e-39 164.9 96 79.2
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 9.2e-39 164.5 129 62.8
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 2.3e-29 133.3 179 45.3
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 9.9e-25 117.9 66 80.3
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 1.3e-24 117.5 92 67.4
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 8.4e-24 114.8 70 75.7
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 2.8e-19 99.8 71 67.6
Pp3c2_23370 Physcomitrium patens HOM05D004257 ORTHO05D005202 9.0e-18 94.7 118 45.8
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 4.6e-14 82.4 145 41.4
RhsimUnG0176200 Rhododendron simsii HOM05D000026 ORTHO05D000127 3.8e-08 62.8 51 60.8
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 3.2e-07 59.7 32 78.1
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 3.2e-07 59.7 32 78.1
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 3.2e-07 59.7 32 78.1
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 3.2e-07 59.7 32 87.5
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 2.1e-06 57.0 48 56.2
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 7.9e-06 55.1 32 78.1


User provided reference genes

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