Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 1.1e-256 889.4 450 100.0
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 2.4e-251 871.7 450 98.0
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 3.5e-205 718.4 461 77.9
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 1.3e-204 716.5 461 77.7
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 1.1e-203 713.4 461 79.6
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 3.2e-203 711.8 459 78.6
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 4.2e-203 711.4 462 79.2
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 2.7e-202 708.8 461 77.2
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 5.7e-200 701.0 459 76.5
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 9.8e-200 700.3 461 75.9
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 4.1e-198 694.9 455 78.2
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 1.2e-197 693.3 456 76.1
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 5.9e-197 691.0 461 75.5
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 7.7e-197 690.6 461 75.9
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 1.0e-196 690.3 459 76.5
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 1.7e-196 689.5 482 74.5
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.7e-196 689.5 461 76.8
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 2.3e-196 689.1 461 76.4
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 2.3e-196 689.1 455 76.0
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 5.0e-196 688.0 460 76.1
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 8.6e-196 687.2 460 76.3
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 8.6e-196 687.2 461 75.3
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 1.5e-195 686.4 468 75.4
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 1.9e-195 686.0 462 75.3
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 7.2e-195 684.1 467 76.2
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 1.2e-194 683.3 461 75.3
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 2.1e-194 682.6 458 76.2
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 2.1e-194 682.6 462 75.5
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 3.6e-194 681.8 462 75.3
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 4.7e-194 681.4 451 76.7
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 1.0e-193 680.2 460 75.4
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 1.8e-193 679.5 479 73.3
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.8e-193 679.5 453 75.9
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 3.0e-193 678.7 449 76.8
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 8.9e-193 677.2 461 74.4
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 2.0e-192 676.0 469 75.5
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 2.6e-192 675.6 461 74.0
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 2.6e-192 675.6 461 74.6
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 3.4e-192 675.2 461 75.7
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 3.4e-192 675.2 461 75.9
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 3.4e-192 675.2 461 74.6
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 5.7e-192 674.5 461 74.4
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 2.2e-191 672.5 461 73.8
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 3.7e-191 671.8 460 74.1
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 8.3e-191 670.6 462 73.2
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.1e-190 670.2 460 73.9
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 1.8e-190 669.5 461 73.5
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 2.4e-190 669.1 462 73.6
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 4.1e-190 668.3 461 73.8
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 2.0e-189 666.0 462 73.6
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 3.5e-189 665.2 459 74.5
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 3.5e-189 665.2 468 71.8
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 1.0e-188 663.7 465 73.3
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 1.0e-188 663.7 464 73.9
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 3.8e-188 661.8 468 73.7
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 3.8e-188 661.8 464 72.4
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 6.6e-188 661.0 460 74.3
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 1.1e-187 660.2 462 71.9
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 1.5e-187 659.8 465 72.9
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 2.5e-187 659.1 425 78.4
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 2.5e-187 659.1 455 73.8
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 3.3e-187 658.7 468 70.5
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 4.3e-187 658.3 461 72.2
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 7.3e-187 657.5 425 78.1
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 2.8e-186 655.6 455 73.8
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 4.7e-186 654.8 461 71.6
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 4.7e-186 654.8 459 73.9
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 6.1e-186 654.4 459 74.7
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 1.8e-185 652.9 509 67.4
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 1.5e-184 649.8 435 76.1
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 2.6e-184 649.0 461 70.7
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 2.6e-184 649.0 440 74.3
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 3.4e-184 648.7 459 72.8
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 3.4e-184 648.7 469 70.4
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 7.5e-184 647.5 493 69.2
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 1.3e-183 646.7 461 71.8
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 1.7e-183 646.4 459 70.8
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 1.7e-183 646.4 459 70.8
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 1.7e-183 646.4 459 70.8
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 2.9e-183 645.6 461 70.3
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 1.9e-182 642.9 461 70.1
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 2.4e-182 642.5 460 70.7
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 2.4e-182 642.5 468 71.8
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 3.2e-182 642.1 458 71.4
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 1.6e-181 639.8 468 71.6
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 3.5e-181 638.6 460 70.0
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 3.5e-181 638.6 460 70.2
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 6.0e-181 637.9 461 70.5
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 7.8e-181 637.5 468 71.2
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 6.6e-180 634.4 467 70.9
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 8.6e-180 634.0 467 69.8
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.5e-179 632.5 465 71.2
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 3.3e-179 632.1 416 74.5
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 2.8e-178 629.0 464 69.6
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 8.0e-178 627.5 454 71.4
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 8.0e-178 627.5 464 71.3
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 4.0e-177 625.2 465 68.6
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 1.2e-176 623.6 456 69.5
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 2.0e-176 622.9 415 74.2
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 2.0e-176 622.9 405 74.3
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 3.4e-176 622.1 463 68.5
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 7.8e-173 610.9 487 65.3
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 1.1e-169 600.5 448 67.0
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 5.2e-169 598.2 455 64.8
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 4.9e-167 591.7 398 72.9
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 1.4e-166 590.1 456 66.9
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 5.1e-164 581.6 461 65.7
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 1.9e-163 579.7 388 74.0
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 1.1e-161 573.9 415 72.5
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 8.9e-161 570.9 415 68.0
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 3.0e-140 502.7 414 60.9
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 1.9e-139 500.0 316 80.1
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 3.1e-137 492.7 380 67.6
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 1.2e-136 490.7 416 58.9
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 1.1e-129 467.6 402 57.5
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.0e-119 434.5 456 53.3
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.1e-105 387.9 410 53.4
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 3.6e-101 372.9 274 67.9
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 3.9e-100 369.4 258 73.6
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 7.7e-96 355.1 535 37.9
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 4.4e-75 286.2 187 77.0
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 1.2e-72 278.1 264 55.7
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 2.4e-65 253.8 244 56.6
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 3.2e-65 253.4 244 56.6
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 9.5e-54 215.3 206 60.7
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 6.2e-45 186.0 145 67.6
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 1.1e-44 185.3 167 60.5
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 6.8e-44 182.6 119 79.8
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 6.4e-42 176.0 146 64.4
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 4.4e-35 153.3 123 65.9
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 3.2e-33 147.1 371 30.2
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 2.8e-21 107.5 60 83.3
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 1.1e-17 95.5 57 84.2
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 1.0e-15 89.0 59 72.9
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 1.3e-15 88.6 70 70.0
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 1.4e-09 68.6 65 56.9


User provided reference genes

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