Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 1.6e-168 596.3 372 100.0
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 4.5e-142 508.4 375 89.1
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 2.2e-120 436.4 298 89.3
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 1.1e-82 311.2 376 52.9
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 1.2e-78 297.7 336 62.2
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 1.6e-75 287.3 376 49.7
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 5.2e-74 282.3 342 57.3
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 7.8e-70 268.5 294 59.9
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 3.9e-69 266.2 340 58.8
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 3.9e-69 266.2 340 58.8
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 2.8e-67 260.0 380 57.1
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 8.1e-67 258.5 347 53.3
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 4.0e-66 256.1 376 51.9
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 9.0e-66 255.0 375 53.6
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 9.0e-66 255.0 281 55.5
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 9.0e-66 255.0 325 51.7
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 2.0e-65 253.8 276 63.0
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 3.4e-65 253.1 297 57.6
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 4.5e-65 252.7 285 60.7
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 9.9e-65 251.5 299 53.8
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 1.3e-64 251.1 285 62.1
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.9e-64 250.0 377 50.1
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 3.8e-64 249.6 278 57.2
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 4.9e-64 249.2 296 55.7
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 1.1e-63 248.1 323 48.6
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 4.2e-63 246.1 294 59.2
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 5.4e-63 245.7 347 50.1
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 2.1e-62 243.8 336 45.2
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 2.1e-62 243.8 346 45.4
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 2.1e-62 243.8 286 58.0
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 3.5e-62 243.0 279 55.6
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 3.5e-62 243.0 293 58.4
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 3.5e-62 243.0 284 53.9
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 6.0e-62 242.3 283 64.0
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 1.0e-61 241.5 286 53.5
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 2.3e-61 240.4 376 52.1
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 2.3e-61 240.4 336 47.0
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 2.3e-61 240.4 280 55.7
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 3.0e-61 240.0 299 49.2
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 5.1e-61 239.2 340 46.2
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 8.7e-61 238.4 340 52.4
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 8.7e-61 238.4 285 53.7
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 8.7e-61 238.4 319 55.5
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 1.1e-60 238.0 329 52.9
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 1.1e-60 238.0 279 51.6
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.5e-60 237.7 376 47.9
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 1.5e-60 237.7 346 52.6
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 3.3e-60 236.5 339 50.4
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 3.3e-60 236.5 283 53.4
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 1.3e-59 234.6 293 57.7
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.3e-59 234.6 372 49.2
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 2.1e-59 233.8 284 49.6
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 2.8e-59 233.4 368 49.5
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 3.7e-59 233.0 369 49.1
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 1.4e-58 231.1 279 56.3
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 5.3e-58 229.2 311 54.7
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 1.5e-57 227.6 282 56.0
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 2.0e-57 227.3 370 49.7
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 2.0e-57 227.3 269 62.8
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 4.5e-57 226.1 283 49.5
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 5.8e-57 225.7 311 52.1
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 7.6e-57 225.3 278 57.2
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 9.9e-57 224.9 363 49.0
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 1.7e-56 224.2 301 54.8
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 1.7e-56 224.2 333 45.3
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 2.2e-56 223.8 371 49.6
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 4.9e-56 222.6 267 58.8
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 1.1e-55 221.5 270 57.8
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 1.4e-55 221.1 285 51.6
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 1.4e-55 221.1 322 46.3
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 1.4e-55 221.1 297 51.5
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 7.1e-55 218.8 276 59.1
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 7.1e-55 218.8 297 47.5
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 9.3e-55 218.4 269 60.6
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 1.2e-54 218.0 287 56.4
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 2.1e-54 217.2 269 57.2
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 2.7e-54 216.9 280 47.5
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 3.5e-54 216.5 381 46.7
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 4.6e-54 216.1 276 55.8
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 7.9e-54 215.3 374 51.6
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 1.3e-53 214.5 268 59.7
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 2.3e-53 213.8 297 47.1
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 3.9e-53 213.0 282 47.9
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 5.1e-53 212.6 272 59.6
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 6.7e-53 212.2 297 46.8
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 1.9e-52 210.7 270 55.2
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.6e-51 207.6 261 59.0
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 6.2e-51 205.7 246 53.7
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 8.2e-51 205.3 308 44.2
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 1.2e-49 201.4 251 47.8
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 1.5e-49 201.1 183 60.1
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 7.6e-49 198.7 281 45.6
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 1.0e-48 198.4 432 39.4
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 8.4e-48 195.3 299 43.5
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 2.5e-44 183.7 172 60.5
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 4.3e-44 183.0 265 54.3
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 2.8e-43 180.3 280 51.1
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 8.2e-43 178.7 164 62.2
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 2.6e-41 173.7 371 38.3
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 3.4e-41 173.3 246 54.9
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 6.5e-40 169.1 163 60.1
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 4.5e-33 146.4 135 60.0
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 1.0e-29 135.2 284 42.6
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 8.2e-27 125.6 299 34.8
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 2.6e-25 120.6 268 37.3
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 2.4e-18 97.4 123 48.0
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 5.2e-13 79.7 46 78.3
SEGI_32810 Sequoiadendron giganteum HOM05D006924 ORTHO05D008218 6.7e-13 79.3 257 31.5
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 8.8e-13 79.0 339 28.0
Hma1.2p1_0000F.1_g000370 Hydrangea macrophylla HOM05D006924 ORTHO05D008218 2.0e-12 77.8 139 49.6
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 2.2e-11 74.3 45 71.1
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 1.4e-10 71.6 202 33.7
AagrBONN_evm.TU.Sc2ySwM_368.1808 Anthoceros agrestis HOM05D006924 ORTHO05D008218 2.7e-09 67.4 136 36.0
Atru.chr1.1063 Acer truncatum HOM05D006924 ORTHO05D008218 7.7e-09 65.9 94 48.9
SMO367G1066 Selaginella moellendorffii HOM05D024584 ORTHO05D008218 1.0e-08 65.5 54 50.0
C09p65600 Brassica napus HOM05D000552 ORTHO05D003270 4.2e-07 60.1 119 58.8


User provided reference genes

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