Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO447G0364 Papaver somniferum HOM05D000198 ORTHO05D005959 1.9e-80 302.4 145 100.0
PSO421G0556 Papaver somniferum HOM05D000198 ORTHO05D005959 6.2e-39 164.5 116 69.8
PSO104G0161 Papaver somniferum HOM05D000198 ORTHO05D005959 1.4e-38 163.3 116 69.0
Aqoxy7G01026 Aquilegia oxysepala HOM05D000198 ORTHO05D005959 9.0e-38 160.6 116 65.5
MSTRG.9524 Avicennia marina HOM05D000198 ORTHO05D005959 4.5e-37 158.3 116 63.8
Thhalv10011405m.g Eutrema salsugineum HOM05D000198 ORTHO05D005959 5.8e-37 157.9 116 63.8
Gohir.A06G144000 Gossypium hirsutum HOM05D000198 ORTHO05D005959 5.8e-37 157.9 119 61.3
TAR667G0005 Trochodendron aralioides HOM05D000198 ORTHO05D005959 7.6e-37 157.5 116 63.8
Nn8g38614 Nelumbo nucifera HOM05D000198 ORTHO05D005959 9.9e-37 157.1 116 64.7
AL1G62810 Arabidopsis lyrata HOM05D000198 ORTHO05D005959 1.3e-36 156.8 116 62.9
AT1G54100 Arabidopsis thaliana HOM05D000198 ORTHO05D005959 1.3e-36 156.8 116 62.9
CSS0046920 Camellia sinensis var. sinensis HOM05D000198 ORTHO05D005959 1.3e-36 156.8 116 62.9
Hund18683 Selenicereus undatus HOM05D000198 ORTHO05D005959 1.7e-36 156.4 116 62.9
BcaB04g17029 Brassica carinata HOM05D000198 ORTHO05D005959 2.2e-36 156.0 116 62.9
A08p01230 Brassica napus HOM05D000198 ORTHO05D005959 2.2e-36 156.0 116 62.9
C03p91970 Brassica napus HOM05D000198 ORTHO05D005959 2.2e-36 156.0 116 62.9
BolC3t21517H Brassica oleracea HOM05D000198 ORTHO05D005959 2.2e-36 156.0 116 62.9
BraA08t32174Z Brassica rapa HOM05D000198 ORTHO05D005959 2.2e-36 156.0 116 62.9
CAN.G862.50 Capsicum annuum HOM05D000198 ORTHO05D005959 2.2e-36 156.0 116 62.9
TAR626G0433 Trochodendron aralioides HOM05D000198 ORTHO05D005959 2.2e-36 156.0 116 62.9
MD02G1094300 Malus domestica HOM05D000198 ORTHO05D005959 2.9e-36 155.6 116 61.2
Actinidia24721 Actinidia chinensis HOM05D000198 ORTHO05D005959 3.8e-36 155.2 116 63.8
Carub.0001s4334 Capsella rubella HOM05D000198 ORTHO05D005959 3.8e-36 155.2 116 62.9
arahy.Tifrunner.gnm1.ann1.159H25 Arachis hypogaea HOM05D000198 ORTHO05D005959 4.9e-36 154.8 116 62.1
arahy.Tifrunner.gnm1.ann1.XD58IC Arachis hypogaea HOM05D000198 ORTHO05D005959 4.9e-36 154.8 116 62.1
Prupe.7G196700 Prunus persica HOM05D000198 ORTHO05D005959 4.9e-36 154.8 116 61.2
Rhsim12G0210700 Rhododendron simsii HOM05D000198 ORTHO05D005959 4.9e-36 154.8 116 62.1
Rhsim12G0211100 Rhododendron simsii HOM05D000198 ORTHO05D005959 4.9e-36 154.8 116 62.1
THA.LOC104815620 Tarenaya hassleriana HOM05D000198 ORTHO05D005959 4.9e-36 154.8 116 62.1
PGR119G2520 Punica granatum HOM05D000198 ORTHO05D005959 6.4e-36 154.5 116 61.2
Sp1g40550 Schrenkiella parvula HOM05D000198 ORTHO05D005959 6.4e-36 154.5 116 62.1
BcaC01g01433 Brassica carinata HOM05D000198 ORTHO05D005959 8.4e-36 154.1 116 62.1
Eucgr.F04402 Eucalyptus grandis HOM05D000198 ORTHO05D005959 8.4e-36 154.1 116 62.9
SalBow6G2826 Salvia bowleyana HOM05D000198 ORTHO05D005959 8.4e-36 154.1 116 62.9
VMungo1309G2902 Vigna mungo HOM05D000198 ORTHO05D005959 8.4e-36 154.1 116 61.2
Gohir.D06G149800 Gossypium hirsutum HOM05D000198 ORTHO05D005959 1.1e-35 153.7 116 62.1
Gorai.010G174800 Gossypium raimondii HOM05D000198 ORTHO05D005959 1.1e-35 153.7 116 62.1
Oeu057874.2 Olea europaea HOM05D000198 ORTHO05D005959 1.1e-35 153.7 116 62.1
Sed0020538 Sechium edule HOM05D000198 ORTHO05D005959 1.1e-35 153.7 116 62.1
PGSC0003DMG400022885 Solanum tuberosum HOM05D000198 ORTHO05D005959 1.1e-35 153.7 116 61.2
COL.COLO4_30736 Corchorus olitorius HOM05D000198 ORTHO05D005959 1.4e-35 153.3 116 62.1
Duzib235G0296 Durio zibethinus HOM05D000198 ORTHO05D005959 1.4e-35 153.3 116 59.5
TWI14G1137 Tripterygium wilfordii HOM05D000198 ORTHO05D005959 1.4e-35 153.3 116 62.1
MELO3C024345.2 Cucumis melo HOM05D000198 ORTHO05D005959 1.9e-35 152.9 116 61.2
Dinv20419 Davidia involucrata HOM05D000198 ORTHO05D005959 1.9e-35 152.9 116 60.3
MBI13_g35420_MAGBIO Magnolia biondii HOM05D000198 ORTHO05D005959 1.9e-35 152.9 116 62.1
MD15G1219200 Malus domestica HOM05D000198 ORTHO05D005959 1.9e-35 152.9 116 60.3
RcHm_v2.0_Chr2g0095351 Rosa chinensis HOM05D000198 ORTHO05D005959 1.9e-35 152.9 116 58.6
CANSAT56G2536 Cannabis sativa HOM05D000198 ORTHO05D005959 2.4e-35 152.5 116 59.5
COL.COLO4_18083 Corchorus olitorius HOM05D000198 ORTHO05D005959 2.4e-35 152.5 116 60.3
Duzib192G0568 Durio zibethinus HOM05D000198 ORTHO05D005959 2.4e-35 152.5 116 61.2
FvH4_1g08890 Fragaria vesca HOM05D000198 ORTHO05D005959 2.4e-35 152.5 116 58.6
HanXRQChr10g0312481 Helianthus annuus HOM05D000198 ORTHO05D005959 2.4e-35 152.5 116 61.2
Mapoly0118s0026 Marchantia polymorpha HOM05D000198 ORTHO05D005959 2.4e-35 152.5 116 60.3
Atru.chr1.4039 Acer truncatum HOM05D000198 ORTHO05D005959 3.2e-35 152.1 116 61.2
CsaV3_7G034360 Cucumis sativus L. HOM05D000198 ORTHO05D005959 3.2e-35 152.1 116 61.2
DCAR_022687 Daucus carota HOM05D000198 ORTHO05D005959 3.2e-35 152.1 116 59.5
Phvul.009G226700 Phaseolus vulgaris HOM05D000198 ORTHO05D005959 3.2e-35 152.1 116 60.3
FAN03G0818 Fragaria x ananassa HOM05D000198 ORTHO05D005959 4.2e-35 151.8 116 57.8
FAN28G1454 Fragaria x ananassa HOM05D000198 ORTHO05D005959 4.2e-35 151.8 116 57.8
Aa31LG8G1290 Aethionema arabicum HOM05D000198 ORTHO05D005959 5.4e-35 151.4 116 61.2
Lj6g0012993 Lotus japonicus HOM05D000198 ORTHO05D005959 5.4e-35 151.4 116 59.5
CDE05G2779 Ceratophyllum demersum HOM05D000198 ORTHO05D005959 7.1e-35 151.0 116 60.3
Dinv37857 Davidia involucrata HOM05D000198 ORTHO05D005959 7.1e-35 151.0 116 60.3
HanXRQChr12g0360421 Helianthus annuus HOM05D000198 ORTHO05D005959 7.1e-35 151.0 116 60.3
Os09g0440300 Oryza sativa ssp. japonica HOM05D000198 ORTHO05D005959 9.3e-35 150.6 116 59.5
Potri.001G167100 Populus trichocarpa HOM05D000198 ORTHO05D005959 9.3e-35 150.6 116 61.2
Thecc.06G122600 Theobroma cacao HOM05D000198 ORTHO05D005959 9.3e-35 150.6 115 60.9
ATR0598G121 Amborella trichopoda HOM05D000198 ORTHO05D005959 1.2e-34 150.2 116 61.2
AUR62009904 Chenopodium quinoa HOM05D000198 ORTHO05D005959 1.2e-34 150.2 116 60.3
Ciclev10025411m.g Citrus clementina HOM05D000198 ORTHO05D005959 1.2e-34 150.2 116 60.3
Sabra01G0126300 Salix brachista HOM05D000198 ORTHO05D005959 1.2e-34 150.2 116 60.3
Manes.04G146300 Manihot esculenta HOM05D000198 ORTHO05D005959 1.6e-34 149.8 116 60.3
GSVIVG01015062001 Vitis vinifera HOM05D000198 ORTHO05D005959 1.6e-34 149.8 116 56.9
EL10Ac7g16425 Beta vulgaris HOM05D000198 ORTHO05D005959 2.1e-34 149.4 116 60.3
CiPaw.03G204900 Carya illinoinensis HOM05D000198 ORTHO05D005959 2.1e-34 149.4 116 59.5
ECA234G3205 Erigeron canadensis HOM05D000198 ORTHO05D005959 2.1e-34 149.4 116 59.5
FAN26G1556 Fragaria x ananassa HOM05D000198 ORTHO05D005959 2.1e-34 149.4 116 57.8
FAN26G2953 Fragaria x ananassa HOM05D000198 ORTHO05D005959 2.1e-34 149.4 116 57.8
Hma1.2p1_0291F.1_g114920 Hydrangea macrophylla HOM05D000198 ORTHO05D005959 2.1e-34 149.4 116 58.6
Potri.003G067700 Populus trichocarpa HOM05D000198 ORTHO05D005959 2.1e-34 149.4 116 60.3
Sabra03G0039600 Salix brachista HOM05D000198 ORTHO05D005959 2.1e-34 149.4 116 59.5
Solyc03g122310.4 Solanum lycopersicum HOM05D000198 ORTHO05D005959 2.1e-34 149.4 116 59.5
Sopen03g041040 Solanum pennellii HOM05D000198 ORTHO05D005959 2.1e-34 149.4 116 59.5
Zm00001eb100180 Zea mays HOM05D000198 ORTHO05D005959 2.1e-34 149.4 116 59.5
Glyma.15G178400 Glycine max HOM05D000198 ORTHO05D005959 2.7e-34 149.1 116 58.6
Ca_02187_v3 Cicer arietinum L. HOM05D000198 ORTHO05D005959 3.5e-34 148.7 116 58.6
Lj5C35T2 Lonicera japonica HOM05D000198 ORTHO05D005959 3.5e-34 148.7 116 60.3
Cc00_g19070 Coffea canephora HOM05D000198 ORTHO05D005959 4.6e-34 148.3 116 59.5
Pp3c2_8090 Physcomitrium patens HOM05D000198 ORTHO05D005959 4.6e-34 148.3 116 57.8
Pp3c2_8099 Physcomitrium patens HOM05D000198 ORTHO05D005959 4.6e-34 148.3 116 57.8
SMO367G0849 Selaginella moellendorffii HOM05D000198 ORTHO05D005959 4.6e-34 148.3 116 58.6
Manes.11G018400 Manihot esculenta HOM05D000198 ORTHO05D005959 6.0e-34 147.9 116 59.5
QL11p001049 Quercus lobata HOM05D000198 ORTHO05D005959 6.0e-34 147.9 116 58.6
AUR62001464 Chenopodium quinoa HOM05D000198 ORTHO05D005959 7.9e-34 147.5 116 58.6
Glyma.09G070300 Glycine max HOM05D000198 ORTHO05D005959 7.9e-34 147.5 116 57.8
Medtr2g042330 Medicago truncatula HOM05D000198 ORTHO05D005959 7.9e-34 147.5 116 58.6
unitig_748.g7471 Utricularia gibba HOM05D000198 ORTHO05D005959 1.0e-33 147.1 122 59.0
AagrBONN_evm.TU.Sc2ySwM_344.2316 Anthoceros agrestis HOM05D000198 ORTHO05D005959 1.3e-33 146.7 116 57.8
Psat1g134760 Pisum sativum HOM05D000198 ORTHO05D005959 1.8e-33 146.4 116 57.8
Lalb_Chr11g0074241 Lupinus albus HOM05D000198 ORTHO05D005959 1.1e-32 143.7 116 57.8
Lalb_Chr11g0074221 Lupinus albus HOM05D000198 ORTHO05D005959 1.5e-32 143.3 116 57.8
Sc12g0010670 Simmondsia chinensis HOM05D000198 ORTHO05D005959 1.9e-32 142.9 116 57.8
FAN23G1242 Fragaria x ananassa HOM05D000198 ORTHO05D005959 3.3e-32 142.1 118 55.9
SEGI_07673 Sequoiadendron giganteum HOM05D000198 ORTHO05D005959 3.3e-32 142.1 116 55.2
Migut.D00933 Erythranthe guttata HOM05D000198 ORTHO05D005959 1.6e-31 139.8 116 58.6
Ah.08g216940 Amaranthus hybridus HOM05D000198 ORTHO05D005959 3.1e-30 135.6 139 49.6
Thecc.09G075200 Theobroma cacao HOM05D000198 ORTHO05D005959 3.4e-29 132.1 97 63.9
Cfa002976 Carpinus fangiana HOM05D000198 ORTHO05D005959 5.5e-27 124.8 87 62.1
HPP92_011367 Vanilla planifolia HOM05D000198 ORTHO05D005959 9.3e-27 124.0 91 59.3
Migut.I01090 Erythranthe guttata HOM05D000198 ORTHO05D005959 8.7e-25 117.5 116 53.4
GSVIVG01016734001 Vitis vinifera HOM05D000198 ORTHO05D005959 5.6e-24 114.8 106 52.8
Cpa.g.sc25.134 Carica papaya HOM05D000198 ORTHO05D005959 7.4e-24 114.4 122 50.0
Haze_26480 Corylus avellana HOM05D000198 ORTHO05D005959 1.1e-22 110.5 115 44.3
Lsat_1_v5_gn_5_136600 Lactuca sativa HOM05D000198 ORTHO05D005959 1.8e-22 109.8 116 50.0
Nitab4.5_0002898g0050 Nicotiana tabacum HOM05D000198 ORTHO05D005959 6.9e-22 107.8 79 57.0
Nitab4.5_0005225g0020 Nicotiana tabacum HOM05D000198 ORTHO05D005959 6.9e-22 107.8 79 57.0
CARHR044450 Cardamine hirsuta HOM05D000198 ORTHO05D005959 1.1e-14 84.0 56 60.7
FAN19G1784 Fragaria x ananassa HOM05D000198 ORTHO05D005959 1.4e-14 83.6 116 44.0
SGA_v2.0_scaffold71G23880 Striga asiatica HOM05D000198 ORTHO05D005959 5.3e-14 81.6 56 58.9
ClCG09G001060 Citrullus lanatus HOM05D000198 ORTHO05D005959 1.5e-13 80.1 55 58.2
Haze_26026 Corylus avellana HOM05D000198 ORTHO05D005959 1.1e-11 73.9 54 55.6
DCAR_007094 Daucus carota HOM05D000198 ORTHO05D000763 5.7e-08 61.6 118 30.5
PSO832G4038 Papaver somniferum HOM05D000198 ORTHO05D000763 5.7e-08 61.6 117 30.8
PSO063G2090 Papaver somniferum HOM05D000198 ORTHO05D000763 7.4e-08 61.2 117 30.8
Psat3g139560 Pisum sativum HOM05D006720 ORTHO05D008333 1.3e-07 60.5 47 59.6
Psat0s2110g0080 Pisum sativum HOM05D000168 ORTHO05D016635 1.7e-07 60.1 47 59.6
vmacro22030 Vaccinium macrocarpon HOM05D000198 ORTHO05D005959 2.8e-07 59.3 49 49.0
CARHR044440 Cardamine hirsuta HOM05D000198 ORTHO05D005959 2.4e-06 56.2 48 58.3
Cpa.g.c44971 Carica papaya HOM05D000198 ORTHO05D005959 4.1e-06 55.5 36 63.9
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 5.3e-06 55.1 113 29.2
SalBow6G5793 Salvia bowleyana HOM05D000198 ORTHO05D005959 6.9e-06 54.7 48 58.3
Gohir.A01G100200 Gossypium hirsutum HOM05D000198 ORTHO05D005702 9.1e-06 54.3 115 27.0


User provided reference genes

Program Settings