Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 3.5e-271 937.9 568 100.0
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 1.5e-237 826.2 573 90.4
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 2.2e-103 380.6 286 65.4
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.8e-102 377.5 281 64.8
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 4.5e-101 372.9 284 64.4
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 8.5e-100 368.6 268 64.9
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 9.4e-99 365.2 273 64.5
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 1.6e-98 364.4 299 58.5
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 2.7e-98 363.6 271 63.1
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 3.6e-98 363.2 271 63.1
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.8e-97 360.9 283 60.4
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 3.0e-97 360.1 294 58.8
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 3.9e-97 359.8 298 59.1
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 3.9e-97 359.8 298 59.1
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 6.7e-97 359.0 281 60.5
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 6.7e-97 359.0 281 60.5
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 1.5e-96 357.8 290 60.0
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.5e-96 357.8 283 59.7
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 2.6e-96 357.1 293 61.8
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 2.2e-95 354.0 283 61.5
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 2.4e-94 350.5 284 59.5
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 2.0e-93 347.4 295 58.6
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 3.5e-93 346.7 298 56.0
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 5.9e-93 345.9 271 60.5
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 1.3e-92 344.7 282 59.2
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 1.3e-92 344.7 282 60.3
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 6.5e-92 342.4 298 55.0
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 3.2e-91 340.1 295 56.3
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 4.2e-91 339.7 297 58.6
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 5.5e-91 339.3 289 56.7
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 5.5e-91 339.3 271 59.4
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.6e-90 337.8 283 58.7
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 1.6e-90 337.8 271 60.5
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 2.7e-90 337.0 290 56.9
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 2.7e-90 337.0 305 52.5
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 2.7e-90 337.0 287 59.6
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 3.6e-90 336.7 272 59.9
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 8.0e-90 335.5 291 56.7
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 2.3e-89 334.0 295 55.9
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 2.3e-89 334.0 291 56.7
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 4.0e-89 333.2 290 58.3
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 4.0e-89 333.2 291 57.0
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 6.8e-89 332.4 298 56.7
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 8.8e-89 332.0 239 64.0
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 2.0e-88 330.9 297 54.2
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 2.6e-88 330.5 280 53.9
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 3.4e-88 330.1 280 53.9
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 3.4e-88 330.1 294 53.4
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 5.7e-88 329.3 241 63.5
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 9.7e-88 328.6 270 58.1
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 2.2e-87 327.4 274 55.8
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 1.8e-86 324.3 271 55.4
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 4.1e-86 323.2 298 56.0
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 4.1e-86 323.2 271 55.7
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 5.3e-86 322.8 543 39.6
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 7.0e-86 322.4 282 55.7
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 9.1e-86 322.0 271 54.2
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 2.0e-85 320.9 284 57.0
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 2.7e-85 320.5 272 59.2
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 2.7e-85 320.5 281 53.7
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 3.5e-85 320.1 281 54.1
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 7.7e-85 318.9 281 53.7
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 7.7e-85 318.9 291 52.9
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 1.0e-84 318.5 281 53.7
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 1.3e-84 318.2 270 55.9
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 1.3e-84 318.2 287 55.4
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 1.7e-84 317.8 306 52.3
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 5.0e-84 316.2 284 56.3
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 5.0e-84 316.2 281 56.2
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 1.1e-83 315.1 281 55.2
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 1.1e-83 315.1 312 52.2
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 1.9e-83 314.3 271 53.5
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 1.9e-83 314.3 271 56.8
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 2.5e-83 313.9 240 60.4
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 3.2e-83 313.5 305 50.5
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 1.2e-82 311.6 281 55.5
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 1.6e-82 311.2 281 54.8
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 2.7e-82 310.5 294 52.0
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 3.6e-82 310.1 281 55.5
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 1.0e-81 308.5 301 52.8
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 2.3e-81 307.4 271 53.1
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 5.2e-81 306.2 301 52.5
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 6.8e-81 305.8 280 55.7
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 2.0e-80 304.3 282 51.1
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 5.7e-80 302.8 272 51.8
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 7.5e-80 302.4 242 59.1
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 1.7e-79 301.2 533 41.7
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.7e-79 301.2 274 55.8
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 1.7e-79 301.2 236 61.0
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 3.7e-79 300.1 281 54.1
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 4.8e-79 299.7 284 54.6
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 1.8e-78 297.7 297 48.1
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 9.1e-78 295.4 287 52.3
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 7.7e-77 292.4 492 38.8
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 2.3e-76 290.8 492 38.6
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 3.8e-76 290.0 298 49.7
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 5.0e-76 289.7 271 53.5
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 1.9e-75 287.7 271 53.5
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 9.5e-75 285.4 267 51.3
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 9.5e-75 285.4 278 50.0
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 1.2e-74 285.0 243 52.7
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 2.1e-74 284.3 255 53.3
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.0e-73 282.0 282 52.5
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 3.4e-72 276.9 284 47.5
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 7.5e-72 275.8 352 42.3
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 6.3e-71 272.7 271 52.8
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 1.8e-70 271.2 242 53.3
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 2.4e-70 270.8 274 50.4
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 5.4e-70 269.6 201 61.7
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 9.2e-70 268.9 180 68.9
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 1.6e-69 268.1 298 48.7
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 2.0e-69 267.7 271 50.9
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 4.5e-69 266.5 305 48.2
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 7.8e-69 265.8 270 53.0
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 2.9e-68 263.8 290 48.6
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 8.6e-68 262.3 295 47.5
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 1.9e-67 261.2 284 49.6
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 5.6e-67 259.6 304 47.0
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 5.6e-67 259.6 281 49.8
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 2.8e-66 257.3 305 47.2
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 3.6e-66 256.9 304 46.7
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 6.1e-66 256.1 304 46.7
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 1.0e-65 255.4 236 51.7
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 3.1e-65 253.8 281 47.7
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 2.0e-64 251.1 283 45.9
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 2.0e-64 251.1 319 45.5
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.3e-63 248.4 272 48.9
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 3.7e-63 246.9 268 49.6
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 5.4e-62 243.0 271 46.5
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 7.0e-62 242.7 487 35.3
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 2.7e-61 240.7 299 43.5
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 2.7e-61 240.7 487 34.5
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 6.0e-61 239.6 277 43.3
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 3.0e-60 237.3 271 45.8
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 3.0e-60 237.3 271 45.8
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 6.6e-60 236.1 277 40.4
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 1.5e-59 235.0 545 32.7
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 1.4e-57 228.4 519 33.5
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 5.2e-57 226.5 272 46.7
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 7.5e-56 222.6 212 51.9
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 7.5e-56 222.6 519 32.9
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 9.8e-56 222.2 267 41.6
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 5.4e-54 216.5 173 59.0
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.3e-51 206.8 271 41.7
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 9.5e-51 205.7 271 41.3
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 9.5e-51 205.7 272 40.8
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 6.8e-49 199.5 191 49.2
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.5e-48 198.4 271 40.6
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 3.4e-48 197.2 281 36.3
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 6.4e-47 193.0 272 39.0
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 1.3e-44 185.3 272 33.8
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 5.1e-44 183.3 296 34.8
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 1.4e-41 175.3 264 35.6
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 4.0e-41 173.7 243 36.2
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 1.5e-40 171.8 241 37.3
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 2.6e-40 171.0 134 57.5
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.4e-38 165.2 286 32.2
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 2.4e-38 164.5 286 32.2
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 1.0e-36 159.1 272 35.7
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 3.6e-34 150.6 165 43.0
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 5.4e-30 136.7 128 53.1
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.6e-26 125.2 82 70.7
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.6e-26 125.2 82 70.7
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 2.1e-26 124.8 258 28.7
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 3.6e-26 124.0 106 56.6
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 9.9e-24 115.9 162 39.5
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 6.4e-23 113.2 79 62.0
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 4.2e-22 110.5 89 56.2
MCO14G045 Micromonas commoda HOM05D000861 ORTHO05D004749 4.0e-17 94.0 202 27.7
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 2.6e-16 91.3 92 48.9
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 7.1e-14 83.2 60 58.3
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.2e-13 82.4 99 47.5
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 2.1e-13 81.6 56 66.1


User provided reference genes

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