Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO407G0231 Papaver somniferum HOM05D002471 ORTHO05D003712 4.0e-134 481.5 252 100.0
PSO541G5863 Papaver somniferum HOM05D002471 ORTHO05D003712 4.2e-59 232.3 247 57.5
PSO675G4888 Papaver somniferum HOM05D002471 ORTHO05D003712 4.2e-59 232.3 247 57.5
Dinv15736 Davidia involucrata HOM05D002471 ORTHO05D003712 2.7e-45 186.4 229 47.6
GSVIVG01031710001 Vitis vinifera HOM05D002471 ORTHO05D003712 1.7e-44 183.7 264 44.7
Nn1g04785 Nelumbo nucifera HOM05D002471 ORTHO05D003712 5.0e-44 182.2 266 43.2
Aqoxy6G01258 Aquilegia oxysepala HOM05D002471 ORTHO05D003712 4.2e-43 179.1 264 43.6
Nn5g30358 Nelumbo nucifera HOM05D002471 ORTHO05D003712 4.2e-43 179.1 267 42.3
Aqoxy5G01185 Aquilegia oxysepala HOM05D002471 ORTHO05D003712 7.2e-43 178.3 256 43.4
Gohir.D02G208600 Gossypium hirsutum HOM05D002471 ORTHO05D003712 7.2e-43 178.3 263 42.6
vmacro02027 Vaccinium macrocarpon HOM05D002471 ORTHO05D003712 1.2e-42 177.6 259 42.9
Atru.chr5.2641 Acer truncatum HOM05D002471 ORTHO05D003712 1.6e-42 177.2 264 42.0
Atru.chr5.2647 Acer truncatum HOM05D002471 ORTHO05D003712 1.6e-42 177.2 264 42.0
Gorai.005G236600 Gossypium raimondii HOM05D002471 ORTHO05D003712 1.6e-42 177.2 263 42.2
Nitab4.5_0002740g0030 Nicotiana tabacum HOM05D002471 ORTHO05D003712 2.1e-42 176.8 264 42.8
Sopen01g050050 Solanum pennellii HOM05D002471 ORTHO05D003712 2.1e-42 176.8 265 43.0
TAR628G0580 Trochodendron aralioides HOM05D002471 ORTHO05D003712 2.1e-42 176.8 265 40.8
Dinv42173 Davidia involucrata HOM05D002471 ORTHO05D003712 2.7e-42 176.4 263 44.1
Manes.07G072800 Manihot esculenta HOM05D002471 ORTHO05D003712 3.6e-42 176.0 259 43.6
Solyc01g107880.3 Solanum lycopersicum HOM05D002471 ORTHO05D003712 3.6e-42 176.0 265 43.0
CANSAT25G1275 Cannabis sativa HOM05D002471 ORTHO05D003712 4.7e-42 175.6 264 41.3
Ciclev10027715m.g Citrus clementina HOM05D002471 ORTHO05D003712 4.7e-42 175.6 263 44.1
Cc02_g19010 Coffea canephora HOM05D002471 ORTHO05D003712 4.7e-42 175.6 263 41.1
FAN27G3397 Fragaria x ananassa HOM05D002471 ORTHO05D003712 4.7e-42 175.6 264 42.4
Rhsim11G0163900 Rhododendron simsii HOM05D002471 ORTHO05D003712 6.1e-42 175.3 263 44.1
Duzib132G0131 Durio zibethinus HOM05D002471 ORTHO05D003712 8.0e-42 174.9 264 42.0
FAN15G2265 Fragaria x ananassa HOM05D002471 ORTHO05D003712 8.0e-42 174.9 263 43.7
Manes.10G078500 Manihot esculenta HOM05D002471 ORTHO05D003712 8.0e-42 174.9 263 41.8
Nitab4.5_0001220g0010 Nicotiana tabacum HOM05D002471 ORTHO05D003712 8.0e-42 174.9 264 42.4
FAN20G0068 Fragaria x ananassa HOM05D002471 ORTHO05D003712 1.0e-41 174.5 263 43.3
Gohir.A03G187800 Gossypium hirsutum HOM05D002471 ORTHO05D003712 1.0e-41 174.5 263 41.8
MD05G1085000 Malus domestica HOM05D002471 ORTHO05D003712 1.0e-41 174.5 263 44.5
Thecc.02G103800 Theobroma cacao HOM05D002471 ORTHO05D003712 1.0e-41 174.5 263 43.0
CAN.G1231.31 Capsicum annuum HOM05D002471 ORTHO05D003712 1.4e-41 174.1 265 43.0
Sabra09G0075700 Salix brachista HOM05D002471 ORTHO05D003712 1.4e-41 174.1 274 40.5
PGSC0003DMG400025880 Solanum tuberosum HOM05D002471 ORTHO05D003712 1.4e-41 174.1 265 42.6
FvH4_2g05730 Fragaria vesca HOM05D002471 ORTHO05D003712 1.8e-41 173.7 263 43.3
FAN24G2894 Fragaria x ananassa HOM05D002471 ORTHO05D003712 1.8e-41 173.7 263 43.3
CiPaw.06G171300 Carya illinoinensis HOM05D002471 ORTHO05D003712 2.3e-41 173.3 263 42.2
Migut.B00367 Erythranthe guttata HOM05D002471 ORTHO05D003712 3.0e-41 172.9 263 41.4
Lj9C356G4 Lonicera japonica HOM05D002471 ORTHO05D003712 3.0e-41 172.9 264 42.0
Lsat_1_v5_gn_0_4161 Lactuca sativa HOM05D002471 ORTHO05D003712 4.0e-41 172.6 254 40.2
Peaxi162Scf00016g00211 Petunia axillaris HOM05D002471 ORTHO05D003712 4.0e-41 172.6 263 42.6
Aa31LG2G16510 Aethionema arabicum HOM05D002471 ORTHO05D003712 5.2e-41 172.2 261 41.4
Ca_18711_v3 Cicer arietinum L. HOM05D002471 ORTHO05D003712 5.2e-41 172.2 263 41.4
ClCG02G006070 Citrullus lanatus HOM05D002471 ORTHO05D003712 5.2e-41 172.2 275 39.6
Potri.001G304100 Populus trichocarpa HOM05D002471 ORTHO05D003712 5.2e-41 172.2 275 39.3
Sed0014443 Sechium edule HOM05D002471 ORTHO05D003712 5.2e-41 172.2 274 40.9
CsaV3_7G008470 Cucumis sativus L. HOM05D002471 ORTHO05D003712 6.8e-41 171.8 263 41.1
Duzib052G0365 Durio zibethinus HOM05D002471 ORTHO05D003712 6.8e-41 171.8 263 42.2
Psat7g126400 Pisum sativum HOM05D002471 ORTHO05D003712 6.8e-41 171.8 277 40.1
TPR.G12707 Trifolium pratense HOM05D002471 ORTHO05D003712 6.8e-41 171.8 262 40.8
QL11p034831 Quercus lobata HOM05D002471 ORTHO05D003712 1.2e-40 171.0 275 40.7
Sed0022765 Sechium edule HOM05D002471 ORTHO05D003712 1.2e-40 171.0 263 41.8
MSTRG.16728 Avicennia marina HOM05D002471 ORTHO05D003712 1.5e-40 170.6 262 41.2
Glyma.02G103800 Glycine max HOM05D002471 ORTHO05D003712 1.5e-40 170.6 261 40.6
Prupe.8G129300 Prunus persica HOM05D002471 ORTHO05D003712 1.5e-40 170.6 263 41.4
BcaNung03791 Brassica carinata HOM05D002471 ORTHO05D003712 2.0e-40 170.2 259 40.9
C01p04750 Brassica napus HOM05D002471 ORTHO05D003712 2.0e-40 170.2 259 40.9
BolC1t00459H Brassica oleracea HOM05D002471 ORTHO05D003712 2.0e-40 170.2 259 40.9
BraA01t00424Z Brassica rapa HOM05D002471 ORTHO05D003712 2.0e-40 170.2 259 40.9
CSS0003761 Camellia sinensis var. sinensis HOM05D002471 ORTHO05D003712 2.0e-40 170.2 263 43.3
Thhalv10024280m.g Eutrema salsugineum HOM05D002471 ORTHO05D003712 2.0e-40 170.2 261 41.8
SalBow6G6213 Salvia bowleyana HOM05D002471 ORTHO05D003712 2.0e-40 170.2 269 41.3
SGA_v2.0_scaffold90G27611 Striga asiatica HOM05D002471 ORTHO05D003712 2.0e-40 170.2 264 41.7
A01p04350 Brassica napus HOM05D002471 ORTHO05D003712 2.6e-40 169.9 259 40.9
CARHR242210 Cardamine hirsuta HOM05D002471 ORTHO05D003712 2.6e-40 169.9 259 41.3
Gorai.013G045900 Gossypium raimondii HOM05D002471 ORTHO05D003712 2.6e-40 169.9 263 42.6
Lj4g0010035 Lotus japonicus HOM05D002471 ORTHO05D003712 2.6e-40 169.9 263 41.4
Oeu048698.2 Olea europaea HOM05D002471 ORTHO05D003712 2.6e-40 169.9 264 42.8
arahy.Tifrunner.gnm1.ann1.92SQ9J Arachis hypogaea HOM05D002471 ORTHO05D003712 3.4e-40 169.5 263 41.1
arahy.Tifrunner.gnm1.ann1.IV52NX Arachis hypogaea HOM05D002471 ORTHO05D003712 3.4e-40 169.5 270 40.0
Carub.0007s0632 Capsella rubella HOM05D002471 ORTHO05D003712 3.4e-40 169.5 261 41.8
Duzib248G1549 Durio zibethinus HOM05D002471 ORTHO05D003712 3.4e-40 169.5 263 41.1
Gohir.D13G040900 Gossypium hirsutum HOM05D002471 ORTHO05D003712 3.4e-40 169.5 263 42.6
PSO170G0111 Papaver somniferum HOM05D002471 ORTHO05D003712 3.4e-40 169.5 264 39.0
TWI79G1465 Tripterygium wilfordii HOM05D002471 ORTHO05D003712 3.4e-40 169.5 264 40.5
AL7G17300 Arabidopsis lyrata HOM05D002471 ORTHO05D003712 4.4e-40 169.1 261 41.4
Cfa004547 Carpinus fangiana HOM05D002471 ORTHO05D003712 4.4e-40 169.1 263 42.2
Gohir.A13G042500 Gossypium hirsutum HOM05D002471 ORTHO05D003712 4.4e-40 169.1 263 42.2
Medtr4g085550 Medicago truncatula HOM05D002471 ORTHO05D003712 4.4e-40 169.1 263 41.4
PSO210G1934 Papaver somniferum HOM05D002471 ORTHO05D003712 4.4e-40 169.1 264 39.0
Phvul.003G047600 Phaseolus vulgaris HOM05D002471 ORTHO05D003712 4.4e-40 169.1 262 40.5
RcHm_v2.0_Chr6g0256621 Rosa chinensis HOM05D002471 ORTHO05D003712 5.7e-40 168.7 264 40.9
VMungo0251G3159 Vigna mungo HOM05D002471 ORTHO05D003712 5.7e-40 168.7 262 40.1
THA.LOC104807837 Tarenaya hassleriana HOM05D002471 ORTHO05D003712 7.5e-40 168.3 260 41.2
CSS0003725 Camellia sinensis var. sinensis HOM05D002471 ORTHO05D003712 9.8e-40 167.9 265 42.3
ECA236G4146 Erigeron canadensis HOM05D002471 ORTHO05D003712 9.8e-40 167.9 258 41.5
Nitab4.5_0000292g0080 Nicotiana tabacum HOM05D002471 ORTHO05D003712 9.8e-40 167.9 263 40.3
DCAR_029075 Daucus carota HOM05D002471 ORTHO05D003712 1.3e-39 167.5 262 42.0
Glyma.07G215200 Glycine max HOM05D002471 ORTHO05D003712 1.3e-39 167.5 259 41.3
Lalb_Chr16g0384861 Lupinus albus HOM05D002471 ORTHO05D003712 1.3e-39 167.5 263 41.4
Potri.009G099400 Populus trichocarpa HOM05D002471 ORTHO05D003712 1.3e-39 167.5 264 42.0
AT4G34100 Arabidopsis thaliana HOM05D002471 ORTHO05D003712 1.7e-39 167.2 261 40.2
CiPaw.05G008400 Carya illinoinensis HOM05D002471 ORTHO05D003712 1.7e-39 167.2 263 40.3
DCAR_022010 Daucus carota HOM05D002471 ORTHO05D003712 2.2e-39 166.8 264 39.4
Hund00120 Selenicereus undatus HOM05D002471 ORTHO05D003712 2.2e-39 166.8 275 38.9
TWI31G1427 Tripterygium wilfordii HOM05D002471 ORTHO05D003712 2.2e-39 166.8 264 40.9
HanXRQChr09g0250641 Helianthus annuus HOM05D002471 ORTHO05D003712 8.3e-39 164.9 260 41.2
MSTRG.20171 Avicennia marina HOM05D002471 ORTHO05D003712 1.1e-38 164.5 261 38.7
HanXRQChr16g0509961 Helianthus annuus HOM05D002471 ORTHO05D003712 1.1e-38 164.5 239 40.2
MD00G1138200 Malus domestica HOM05D002471 ORTHO05D003712 1.1e-38 164.5 267 40.8
Sabra16G0190800 Salix brachista HOM05D002471 ORTHO05D003712 1.1e-38 164.5 263 40.7
Lalb_Chr05g0219311 Lupinus albus HOM05D002471 ORTHO05D003712 1.4e-38 164.1 275 41.1
vmacro19516 Vaccinium macrocarpon HOM05D002471 ORTHO05D003712 2.4e-38 163.3 215 43.7
Nitab4.5_0001230g0030 Nicotiana tabacum HOM05D002471 ORTHO05D003712 3.1e-38 162.9 263 39.9
TWI75G1110 Tripterygium wilfordii HOM05D002471 ORTHO05D003712 4.1e-38 162.5 263 38.4
Ah.01g010650 Amaranthus hybridus HOM05D002471 ORTHO05D003712 5.4e-38 162.2 261 41.0
Hund06339 Selenicereus undatus HOM05D002471 ORTHO05D003712 5.4e-38 162.2 273 37.4
HanXRQChr03g0070141 Helianthus annuus HOM05D002471 ORTHO05D003712 7.0e-38 161.8 264 40.9
AUR62013236 Chenopodium quinoa HOM05D002471 ORTHO05D003712 1.6e-37 160.6 262 38.9
Actinidia17877 Actinidia chinensis HOM05D002471 ORTHO05D003712 3.5e-37 159.5 265 40.8
AUR62010254 Chenopodium quinoa HOM05D002471 ORTHO05D003712 3.5e-37 159.5 262 40.8
HPP92_000199 Vanilla planifolia HOM05D002471 ORTHO05D003712 3.5e-37 159.5 265 39.6
Sc14g0001810 Simmondsia chinensis HOM05D002471 ORTHO05D003712 5.9e-37 158.7 254 40.2
Eucgr.I01130 Eucalyptus grandis HOM05D002471 ORTHO05D003712 1.0e-36 157.9 261 38.3
EL10Ac9g22322 Beta vulgaris HOM05D002471 ORTHO05D003712 1.7e-36 157.1 262 38.2
Ah.01g017910 Amaranthus hybridus HOM05D002471 ORTHO05D003712 2.3e-36 156.8 261 38.3
MELO3C018461.2 Cucumis melo HOM05D002471 ORTHO05D003712 2.3e-36 156.8 263 39.2
Lsat_1_v5_gn_5_115740 Lactuca sativa HOM05D002471 ORTHO05D003712 5.0e-36 155.6 249 42.6
Rhsim05G0086900 Rhododendron simsii HOM05D002471 ORTHO05D003712 5.0e-36 155.6 263 40.7
Haze_10112 Corylus avellana HOM05D002471 ORTHO05D003712 6.6e-36 155.2 262 40.8
Haze_10115 Corylus avellana HOM05D002471 ORTHO05D003712 6.6e-36 155.2 262 40.8
PGR142G0507 Punica granatum HOM05D002471 ORTHO05D003712 8.6e-36 154.8 265 37.7
HanXRQChr16g0515001 Helianthus annuus HOM05D002471 ORTHO05D003712 1.1e-35 154.5 260 38.8
SHI05318 Sapria himalayana HOM05D002471 ORTHO05D003712 1.9e-35 153.7 259 36.7
Cpa.g.sc200.25 Carica papaya HOM05D002471 ORTHO05D003712 2.5e-35 153.3 245 40.8
Zm00001eb275450 Zea mays HOM05D002471 ORTHO05D003712 2.5e-35 153.3 263 40.3
ATR0762G060 Amborella trichopoda HOM05D002471 ORTHO05D003712 3.3e-35 152.9 263 38.0
CDE04G3492 Ceratophyllum demersum HOM05D002471 ORTHO05D003712 3.3e-35 152.9 262 41.6
Oeu010384.1 Olea europaea HOM05D002471 ORTHO05D003712 4.2e-35 152.5 246 40.7
SEGI_06740 Sequoiadendron giganteum HOM05D002471 ORTHO05D003712 4.2e-35 152.5 259 37.5
Zm00001eb387290 Zea mays HOM05D002471 ORTHO05D003712 5.5e-35 152.1 263 39.9
SEGI_08024 Sequoiadendron giganteum HOM05D002471 ORTHO05D003712 2.1e-34 150.2 267 38.2
Os06g0639100 Oryza sativa ssp. japonica HOM05D002471 ORTHO05D003712 4.7e-34 149.1 263 39.5
Actinidia00425 Actinidia chinensis HOM05D002471 ORTHO05D003712 1.0e-33 147.9 138 55.8
ECA234G3000 Erigeron canadensis HOM05D002471 ORTHO05D003712 5.2e-33 145.6 267 39.3
SpUn0912_0010 Schrenkiella parvula HOM05D002471 ORTHO05D003712 6.8e-33 145.2 141 51.8
Sc14g0001830 Simmondsia chinensis HOM05D002471 ORTHO05D003712 1.7e-31 140.6 136 52.2
Mapoly0082s0015 Marchantia polymorpha HOM05D002471 ORTHO05D003712 3.7e-31 139.4 261 36.4
Oeu028240.1 Olea europaea HOM05D002471 ORTHO05D003712 4.9e-31 139.0 250 38.0
Thhalv10022448m.g Eutrema salsugineum HOM05D002471 ORTHO05D003712 2.7e-29 133.3 256 36.3
Pp3c9_10370 Physcomitrium patens HOM05D002471 ORTHO05D003712 7.8e-29 131.7 263 35.4
Pp3c9_10380 Physcomitrium patens HOM05D002471 ORTHO05D003712 7.8e-29 131.7 263 35.4
AagrBONN_evm.TU.Sc2ySwM_228.2821 Anthoceros agrestis HOM05D002471 ORTHO05D003712 8.6e-28 128.3 263 36.1
Pp3c15_7960 Physcomitrium patens HOM05D002471 ORTHO05D003712 1.1e-27 127.9 263 33.5
Pp3c15_8020 Physcomitrium patens HOM05D002471 ORTHO05D003712 1.1e-27 127.9 263 33.5
A03p62600 Brassica napus HOM05D002471 ORTHO05D003712 2.8e-26 123.2 229 35.4
BraA03t15330Z Brassica rapa HOM05D002471 ORTHO05D003712 3.1e-25 119.8 230 35.7
GSVIVG01022083001 Vitis vinifera HOM05D002471 ORTHO05D003712 1.1e-22 111.3 257 33.9
BcaC01g00935 Brassica carinata HOM05D002471 ORTHO05D003712 1.9e-22 110.5 222 36.5
C03p86130 Brassica napus HOM05D002471 ORTHO05D003712 1.9e-22 110.5 222 36.5
BolC3t20901H Brassica oleracea HOM05D002471 ORTHO05D003712 1.9e-22 110.5 222 36.5
SMO347G0169 Selaginella moellendorffii HOM05D002471 ORTHO05D003712 5.4e-22 109.0 230 33.9
BraA08t33676Z Brassica rapa HOM05D002471 ORTHO05D003712 4.6e-21 105.9 227 36.1
ECA236G4164 Erigeron canadensis HOM05D002471 ORTHO05D003712 1.0e-20 104.8 257 32.3
Dinv30011 Davidia involucrata HOM05D002471 ORTHO05D003712 9.5e-19 98.2 257 31.9
CDE02G3215 Ceratophyllum demersum HOM05D002471 ORTHO05D003712 2.3e-17 93.6 69 65.2
BcaC01g00933 Brassica carinata HOM05D002471 ORTHO05D003712 6.8e-17 92.0 226 31.9
C03p86110 Brassica napus HOM05D002471 ORTHO05D003712 6.8e-17 92.0 226 31.9
BolC3t20899H Brassica oleracea HOM05D002471 ORTHO05D003712 6.8e-17 92.0 226 31.9
Pp3c1_24550 Physcomitrium patens HOM05D002471 ORTHO05D003712 1.3e-15 87.8 230 26.1
CANSAT01G1155 Cannabis sativa HOM05D002471 ORTHO05D003712 6.4e-15 85.5 267 29.2
Lj9A355T76 Lonicera japonica HOM05D002471 ORTHO05D003712 1.9e-14 84.0 134 39.6
PSO675G7634 Papaver somniferum HOM05D002471 ORTHO05D003712 5.4e-14 82.4 254 31.9
COL.COLO4_32627 Corchorus olitorius HOM05D002471 ORTHO05D003712 4.6e-13 79.3 197 34.0
PSO675G8350 Papaver somniferum HOM05D002471 ORTHO05D003712 4.6e-13 79.3 239 30.5
PSO407G0215 Papaver somniferum HOM05D002471 ORTHO05D003712 1.3e-12 77.8 237 32.1
PSO541G4500 Papaver somniferum HOM05D002471 ORTHO05D003712 1.3e-12 77.8 236 31.8
PSO541G2248 Papaver somniferum HOM05D002471 ORTHO05D003712 1.6e-10 70.9 160 36.2
PSO541G3046 Papaver somniferum HOM05D002471 ORTHO05D003712 2.8e-10 70.1 231 31.6
A08p17150 Brassica napus HOM05D002471 ORTHO05D003712 8.1e-10 68.6 188 30.3
PRCOL_00003587 Prasinoderma coloniale HOM05D002471 ORTHO05D003712 8.1e-10 68.6 78 42.3
CDE02G1550 Ceratophyllum demersum HOM05D002471 ORTHO05D003712 2.3e-09 67.0 180 33.3
AL7G17290 Arabidopsis lyrata HOM05D002471 ORTHO05D003712 4.0e-09 66.2 80 45.0
CBR_g17730 Chara braunii HOM05D002471 ORTHO05D003712 4.0e-09 66.2 142 35.2
C07p60160 Brassica napus HOM05D002471 ORTHO05D003712 2.6e-08 63.5 83 41.0
PSO675G5225 Papaver somniferum HOM05D002471 ORTHO05D003712 3.2e-06 56.6 89 37.1


User provided reference genes

Program Settings