Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 1.5e-141 506.1 253 100.0
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 4.9e-140 501.1 253 98.8
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 1.2e-101 373.6 252 73.0
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 5.8e-101 371.3 254 73.6
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 5.8e-101 371.3 254 73.2
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 5.8e-101 371.3 252 73.0
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 1.3e-100 370.2 260 71.2
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 6.5e-100 367.9 254 72.0
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 1.1e-99 367.1 252 73.0
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 1.4e-99 366.7 253 73.1
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 4.2e-99 365.2 254 72.4
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 7.1e-99 364.4 254 73.2
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 1.6e-98 363.2 252 72.6
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 6.0e-98 361.3 252 71.4
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 7.9e-98 360.9 250 72.0
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 1.8e-97 359.8 256 70.7
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 2.3e-97 359.4 255 72.2
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 5.1e-97 358.2 253 70.8
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 6.7e-97 357.8 252 70.6
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 8.7e-97 357.5 256 69.9
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 8.7e-97 357.5 253 70.8
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 5.7e-96 354.8 252 69.8
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 7.4e-96 354.4 256 69.1
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 7.4e-96 354.4 252 69.8
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 9.7e-96 354.0 255 69.4
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 9.7e-96 354.0 253 70.0
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 1.6e-95 353.2 255 71.0
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 1.6e-95 353.2 252 70.6
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 2.1e-95 352.8 250 72.0
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 2.1e-95 352.8 252 69.4
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 2.8e-95 352.4 257 68.9
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 2.8e-95 352.4 252 69.4
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 2.8e-95 352.4 257 69.6
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 2.8e-95 352.4 257 69.6
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 2.8e-95 352.4 253 70.4
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 4.8e-95 351.7 255 69.8
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 1.1e-94 350.5 252 69.4
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 1.4e-94 350.1 259 70.7
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 1.4e-94 350.1 256 69.1
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 1.4e-94 350.1 252 69.4
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 1.8e-94 349.7 253 69.2
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 1.8e-94 349.7 253 68.0
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 2.4e-94 349.4 250 69.6
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 2.4e-94 349.4 250 69.6
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 2.4e-94 349.4 254 70.5
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 2.4e-94 349.4 256 69.5
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 3.1e-94 349.0 255 71.0
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 4.1e-94 348.6 233 73.8
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 9.0e-94 347.4 253 68.0
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 1.2e-93 347.1 260 68.1
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 1.2e-93 347.1 260 68.1
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 2.0e-93 346.3 257 68.5
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 2.0e-93 346.3 258 68.2
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 3.4e-93 345.5 253 67.2
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 3.4e-93 345.5 255 69.0
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 3.4e-93 345.5 254 68.1
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 5.9e-93 344.7 253 68.4
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 5.9e-93 344.7 254 69.3
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 7.6e-93 344.4 263 68.4
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 1.0e-92 344.0 252 69.8
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 3.8e-92 342.0 228 74.1
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 5.0e-92 341.7 251 67.3
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 5.0e-92 341.7 252 68.7
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 6.5e-92 341.3 258 67.4
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 1.1e-91 340.5 259 66.4
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 1.4e-91 340.1 255 66.3
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 1.9e-91 339.7 249 67.5
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 2.5e-91 339.3 257 68.5
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 2.5e-91 339.3 254 67.7
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 3.2e-91 339.0 249 67.5
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 3.2e-91 339.0 257 66.9
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 4.2e-91 338.6 253 69.2
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 4.2e-91 338.6 264 67.4
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 7.2e-91 337.8 252 69.0
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 9.3e-91 337.4 255 69.4
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 9.3e-91 337.4 254 67.3
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.2e-90 337.0 268 66.8
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 1.2e-90 337.0 254 67.3
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 1.6e-90 336.7 253 66.8
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 3.6e-90 335.5 259 65.6
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 1.3e-89 333.6 252 68.7
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 6.7e-89 331.3 249 65.9
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 1.5e-88 330.1 277 63.2
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 1.9e-88 329.7 270 64.4
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 3.3e-88 328.9 239 70.3
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 3.3e-88 328.9 255 67.5
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 5.7e-88 328.2 243 67.1
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 5.7e-88 328.2 223 72.2
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 9.7e-88 327.4 253 63.6
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 1.8e-86 323.2 302 58.3
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 4.1e-86 322.0 253 62.8
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 5.3e-86 321.6 237 68.8
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 6.9e-86 321.2 239 69.9
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 2.6e-85 319.3 253 61.7
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 2.5e-83 312.8 255 63.9
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 4.2e-83 312.0 254 61.8
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 8.8e-81 304.3 236 66.1
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 1.1e-80 303.9 254 61.4
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 2.8e-79 299.3 241 66.4
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 6.3e-79 298.1 252 60.3
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 1.8e-78 296.6 231 63.6
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 3.4e-77 292.4 199 74.9
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 1.2e-74 283.9 254 58.7
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 3.6e-74 282.3 200 69.5
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 2.6e-72 276.2 205 69.8
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 2.6e-72 276.2 205 67.3
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 3.1e-70 269.2 258 57.0
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 4.1e-70 268.9 166 77.7
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 3.2e-67 259.2 236 60.6
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 1.2e-64 250.8 242 54.1
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 1.4e-62 243.8 192 63.5
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 2.2e-60 236.5 220 60.9
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 8.5e-60 234.6 185 65.9
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 1.1e-59 234.2 175 69.7
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 3.2e-59 232.6 217 54.8
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 2.6e-56 223.0 251 50.2
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 3.5e-53 212.6 216 52.3
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 5.0e-52 208.8 260 48.8
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 6.5e-52 208.4 131 77.1
Lj2A1030T57 Lonicera japonica HOM05D005643 ORTHO05D006819 3.6e-50 202.6 115 80.0
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 5.9e-45 185.3 101 86.1
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 7.5e-40 168.3 258 39.1
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 1.2e-37 161.0 141 61.7
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 2.7e-37 159.8 141 61.0
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 4.6e-37 159.1 147 55.8
BraA02t05718Z Brassica rapa HOM05D005643 ORTHO05D006819 7.0e-30 135.2 68 89.7
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 2.6e-24 116.7 91 65.9
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 4.9e-23 112.5 117 54.7
Cpa.g.sc216.17 Carica papaya HOM05D005643 ORTHO05D006819 2.4e-22 110.2 57 84.2
SHI06095 Sapria himalayana HOM05D005643 ORTHO05D006819 2.8e-18 96.7 54 77.8
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 3.4e-16 89.7 75 57.3
ClCG02G021090 Citrullus lanatus HOM05D005643 ORTHO05D006819 5.8e-16 89.0 72 63.9
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 5.8e-16 89.0 71 62.0
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 2.2e-15 87.0 71 60.6
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 5.4e-14 82.4 70 54.3
SHI06094 Sapria himalayana HOM05D000105 ORTHO05D000023 3.3e-11 73.2 60 63.3
Rhsim13G0093600 Rhododendron simsii HOM05D000699 ORTHO05D000519 2.4e-09 67.0 41 75.6
PRCOL_00006457 Prasinoderma coloniale HOM05D005643 ORTHO05D006819 3.8e-07 59.7 103 39.8
TAR005G0002 Trochodendron aralioides HOM05D005643 ORTHO05D006819 4.9e-07 59.3 57 52.6


User provided reference genes

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