Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4484 Papaver somniferum HOM05D001982 ORTHO05D003938 1.5e-59 232.6 119 100.0
PSO170G1716 Papaver somniferum HOM05D001982 ORTHO05D003938 3.9e-39 164.9 137 70.1
PSO063G1706 Papaver somniferum HOM05D001982 ORTHO05D003938 4.2e-33 144.8 76 94.7
PSO782G3517 Papaver somniferum HOM05D001982 ORTHO05D003938 4.2e-33 144.8 76 94.7
Aqoxy3G04305 Aquilegia oxysepala HOM05D001982 ORTHO05D003938 9.6e-30 133.7 73 90.4
Duzib248G1602 Durio zibethinus HOM05D001982 ORTHO05D003938 1.3e-29 133.3 73 90.4
RcHm_v2.0_Chr7g0177081 Rosa chinensis HOM05D001982 ORTHO05D003938 1.3e-29 133.3 73 90.4
Migut.F00794 Erythranthe guttata HOM05D001982 ORTHO05D003938 2.1e-29 132.5 73 87.7
TAR629G0467 Trochodendron aralioides HOM05D001982 ORTHO05D003938 2.8e-29 132.1 73 89.0
TAR629G3388 Trochodendron aralioides HOM05D001982 ORTHO05D003938 2.8e-29 132.1 73 89.0
CANSAT64G2347 Cannabis sativa HOM05D001982 ORTHO05D003938 3.7e-29 131.7 73 89.0
DCAR_002589 Daucus carota HOM05D001982 ORTHO05D003938 3.7e-29 131.7 73 89.0
Duzib132G0765 Durio zibethinus HOM05D001982 ORTHO05D003938 3.7e-29 131.7 73 87.7
Migut.N00791 Erythranthe guttata HOM05D001982 ORTHO05D003938 3.7e-29 131.7 73 89.0
Gohir.A03G165300 Gossypium hirsutum HOM05D001982 ORTHO05D003938 3.7e-29 131.7 73 90.4
Gohir.D02G188500 Gossypium hirsutum HOM05D001982 ORTHO05D003938 3.7e-29 131.7 73 90.4
Gorai.005G211200 Gossypium raimondii HOM05D001982 ORTHO05D003938 3.7e-29 131.7 73 90.4
Lj3A848T56 Lonicera japonica HOM05D001982 ORTHO05D003938 3.7e-29 131.7 73 89.0
Nn1g09877 Nelumbo nucifera HOM05D001982 ORTHO05D003938 3.7e-29 131.7 73 89.0
TAR371G1187 Trochodendron aralioides HOM05D001982 ORTHO05D003938 3.7e-29 131.7 72 90.3
Lj2g0016431 Lotus japonicus HOM05D001982 ORTHO05D003938 4.8e-29 131.3 76 85.5
Potri.015G028200 Populus trichocarpa HOM05D001982 ORTHO05D003938 4.8e-29 131.3 72 88.9
Glyma.16G213200 Glycine max HOM05D001982 ORTHO05D003938 8.2e-29 130.6 74 85.1
Gohir.D13G060900 Gossypium hirsutum HOM05D001982 ORTHO05D003938 8.2e-29 130.6 73 89.0
Gorai.013G069200 Gossypium raimondii HOM05D001982 ORTHO05D003938 8.2e-29 130.6 73 89.0
Hma1.2p1_0989F.1_g244810 Hydrangea macrophylla HOM05D001982 ORTHO05D003938 8.2e-29 130.6 73 87.7
Lsat_1_v5_gn_3_36280 Lactuca sativa HOM05D001982 ORTHO05D003938 8.2e-29 130.6 107 63.6
Lalb_Chr22g0353971 Lupinus albus HOM05D001982 ORTHO05D003938 8.2e-29 130.6 74 85.1
Oeu011121.2 Olea europaea HOM05D001982 ORTHO05D003938 8.2e-29 130.6 73 87.7
Oeu059725.1 Olea europaea HOM05D001982 ORTHO05D003938 8.2e-29 130.6 74 86.5
SGA_v2.0_scaffold2G01008 Striga asiatica HOM05D001982 ORTHO05D003938 8.2e-29 130.6 73 87.7
unitig_747.g21790 Utricularia gibba HOM05D001982 ORTHO05D003938 8.2e-29 130.6 73 86.3
Cfa017838 Carpinus fangiana HOM05D001982 ORTHO05D003938 1.1e-28 130.2 73 86.3
ClCG01G014830 Citrullus lanatus HOM05D001982 ORTHO05D003938 1.1e-28 130.2 73 87.7
Ciclev10020931m.g Citrus clementina HOM05D001982 ORTHO05D003938 1.1e-28 130.2 72 88.9
COL.COLO4_33052 Corchorus olitorius HOM05D001982 ORTHO05D003938 1.1e-28 130.2 73 87.7
MELO3C002167.2 Cucumis melo HOM05D001982 ORTHO05D003938 1.1e-28 130.2 73 87.7
CsaV3_1G007500 Cucumis sativus L. HOM05D001982 ORTHO05D003938 1.1e-28 130.2 73 87.7
MBI03_g13817_MAGBIO Magnolia biondii HOM05D001982 ORTHO05D003938 1.1e-28 130.2 73 86.3
MD06G1239800 Malus domestica HOM05D001982 ORTHO05D003938 1.1e-28 130.2 73 86.3
arahy.Tifrunner.gnm1.ann1.X8LG8D Arachis hypogaea HOM05D001982 ORTHO05D003938 1.4e-28 129.8 74 85.1
arahy.Tifrunner.gnm1.ann1.XQH9IF Arachis hypogaea HOM05D001982 ORTHO05D003938 1.4e-28 129.8 74 85.1
arahy.Tifrunner.gnm1.ann1.YRK7KB Arachis hypogaea HOM05D001982 ORTHO05D003938 1.4e-28 129.8 74 85.1
Ciclev10032075m.g Citrus clementina HOM05D001982 ORTHO05D003938 1.4e-28 129.8 74 87.8
DCAR_023463 Daucus carota HOM05D001982 ORTHO05D003938 1.4e-28 129.8 73 86.3
FvH4_5g18391 Fragaria vesca HOM05D001982 ORTHO05D003938 1.4e-28 129.8 73 87.7
FAN04G2680 Fragaria x ananassa HOM05D001982 ORTHO05D008035 1.4e-28 129.8 73 87.7
FAN13G2347 Fragaria x ananassa HOM05D001982 ORTHO05D003938 1.4e-28 129.8 73 87.7
Hund24379 Selenicereus undatus HOM05D001982 ORTHO05D003938 1.4e-28 129.8 73 86.3
CiPaw.16G072900 Carya illinoinensis HOM05D001982 ORTHO05D003938 1.8e-28 129.4 73 86.3
Dinv17623 Davidia involucrata HOM05D001982 ORTHO05D003938 1.8e-28 129.4 73 86.3
FAN08G1981 Fragaria x ananassa HOM05D001982 ORTHO05D008035 1.8e-28 129.4 72 88.9
Lalb_Chr14g0370241 Lupinus albus HOM05D001982 ORTHO05D003938 1.8e-28 129.4 74 83.8
Oeu030729.1 Olea europaea HOM05D001982 ORTHO05D003938 1.8e-28 129.4 73 87.7
VMungo0464G0532 Vigna mungo HOM05D001982 ORTHO05D003938 1.8e-28 129.4 74 83.8
Gohir.A13G060800 Gossypium hirsutum HOM05D001982 ORTHO05D003938 2.4e-28 129.0 73 87.7
Potri.012G036200 Populus trichocarpa HOM05D001982 ORTHO05D003938 2.4e-28 129.0 72 87.5
MSTRG.298 Avicennia marina HOM05D001982 ORTHO05D003938 3.1e-28 128.6 73 84.9
CSS0026731 Camellia sinensis var. sinensis HOM05D001982 ORTHO05D003938 3.1e-28 128.6 73 86.3
Haze_18370 Corylus avellana HOM05D001982 ORTHO05D003938 3.1e-28 128.6 73 86.3
Sed0019851 Sechium edule HOM05D001982 ORTHO05D003938 3.1e-28 128.6 73 86.3
Thecc.02G158000 Theobroma cacao HOM05D001982 ORTHO05D003938 3.1e-28 128.6 73 86.3
GSVIVG01029337001 Vitis vinifera HOM05D001982 ORTHO05D003938 3.1e-28 128.6 73 86.3
DCAR_026892 Daucus carota HOM05D001982 ORTHO05D003938 4.1e-28 128.3 73 86.3
Phvul.004G139300 Phaseolus vulgaris HOM05D001982 ORTHO05D003938 4.1e-28 128.3 74 83.8
SalBow6G6657 Salvia bowleyana HOM05D001982 ORTHO05D003938 4.1e-28 128.3 73 86.3
GSVIVG01026227001 Vitis vinifera HOM05D001982 ORTHO05D003938 4.1e-28 128.3 73 84.9
MSTRG.8248 Avicennia marina HOM05D001982 ORTHO05D003938 5.3e-28 127.9 73 83.6
Duzib052G0243 Durio zibethinus HOM05D001982 ORTHO05D003938 5.3e-28 127.9 71 88.7
ECA246G4989 Erigeron canadensis HOM05D001982 ORTHO05D007237 5.3e-28 127.9 73 86.3
FAN18G1706 Fragaria x ananassa HOM05D001982 ORTHO05D008035 5.3e-28 127.9 73 86.3
MD14G1245700 Malus domestica HOM05D001982 ORTHO05D003938 5.3e-28 127.9 73 84.9
Rhsim09G0070800 Rhododendron simsii HOM05D001982 ORTHO05D003938 5.3e-28 127.9 72 86.1
Cpa.g.sc0.121 Carica papaya HOM05D001982 ORTHO05D003938 6.9e-28 127.5 73 84.9
Eucgr.J00864 Eucalyptus grandis HOM05D001982 ORTHO05D003938 6.9e-28 127.5 73 86.3
HanXRQChr17g0540971 Helianthus annuus HOM05D001982 ORTHO05D003938 6.9e-28 127.5 73 86.3
Ca_11833_v3 Cicer arietinum L. HOM05D001982 ORTHO05D003938 9.0e-28 127.1 74 82.4
Glyma.09G164900 Glycine max HOM05D001982 ORTHO05D003938 9.0e-28 127.1 74 82.4
Manes.11G102600 Manihot esculenta HOM05D001982 ORTHO05D003938 9.0e-28 127.1 73 83.6
Medtr6g077820 Medicago truncatula HOM05D001982 ORTHO05D003938 9.0e-28 127.1 74 82.4
Psat1g121920 Pisum sativum HOM05D001982 ORTHO05D003938 9.0e-28 127.1 74 83.8
SGA_v2.0_scaffold221G42671 Striga asiatica HOM05D001982 ORTHO05D003938 9.0e-28 127.1 73 86.3
Actinidia38418 Actinidia chinensis HOM05D001982 ORTHO05D003938 1.2e-27 126.7 73 84.9
QL10p034220 Quercus lobata HOM05D001982 ORTHO05D003938 1.2e-27 126.7 73 84.9
Sed0001556 Sechium edule HOM05D001982 ORTHO05D003938 1.2e-27 126.7 73 84.9
TWI81G0371 Tripterygium wilfordii HOM05D001982 ORTHO05D003938 1.2e-27 126.7 72 86.1
Atru.chr9.96 Acer truncatum HOM05D001982 ORTHO05D003938 1.5e-27 126.3 72 86.1
CARHR190290 Cardamine hirsuta HOM05D001982 ORTHO05D003938 2.0e-27 125.9 74 82.4
AUR62017711 Chenopodium quinoa HOM05D001982 ORTHO05D003938 2.0e-27 125.9 73 83.6
AUR62032970 Chenopodium quinoa HOM05D001982 ORTHO05D003938 2.0e-27 125.9 73 83.6
Mapoly0111s0054 Marchantia polymorpha HOM05D001982 ORTHO05D003938 2.0e-27 125.9 72 83.3
ATR0618G140 Amborella trichopoda HOM05D001982 ORTHO05D003938 2.6e-27 125.6 73 83.6
CAN.G282.53 Capsicum annuum HOM05D001982 ORTHO05D003938 2.6e-27 125.6 73 82.2
PGR083G2378 Punica granatum HOM05D001982 ORTHO05D003938 2.6e-27 125.6 73 83.6
Solyc01g007910.3 Solanum lycopersicum HOM05D001982 ORTHO05D003938 2.6e-27 125.6 73 82.2
Sopen01g003450 Solanum pennellii HOM05D001982 ORTHO05D003938 2.6e-27 125.6 73 82.2
PGSC0003DMG400016412 Solanum tuberosum HOM05D001982 ORTHO05D003938 2.6e-27 125.6 73 82.2
THA.LOC104818374 Tarenaya hassleriana HOM05D001982 ORTHO05D003938 2.6e-27 125.6 74 82.4
HanXRQChr06g0170891 Helianthus annuus HOM05D001982 ORTHO05D003938 3.4e-27 125.2 73 84.9
MBI06_g20297_MAGBIO Magnolia biondii HOM05D001982 ORTHO05D003938 3.4e-27 125.2 72 83.3
Potri.005G091400 Populus trichocarpa HOM05D001982 ORTHO05D003938 3.4e-27 125.2 73 82.2
TWI15G0763 Tripterygium wilfordii HOM05D001982 ORTHO05D003938 3.4e-27 125.2 72 84.7
Actinidia13716 Actinidia chinensis HOM05D001982 ORTHO05D003938 4.5e-27 124.8 74 81.1
Aa31LG11G2700 Aethionema arabicum HOM05D001982 ORTHO05D003938 4.5e-27 124.8 74 81.1
AL6G34470 Arabidopsis lyrata HOM05D001982 ORTHO05D003938 4.5e-27 124.8 74 81.1
A03p46310 Brassica napus HOM05D001982 ORTHO05D003938 4.5e-27 124.8 74 81.1
C07p44330 Brassica napus HOM05D001982 ORTHO05D003938 4.5e-27 124.8 74 81.1
BolC7t44954H Brassica oleracea HOM05D001982 ORTHO05D003938 4.5e-27 124.8 74 81.1
BraA03t13755Z Brassica rapa HOM05D001982 ORTHO05D003938 4.5e-27 124.8 74 81.1
Carub.0006s2102 Capsella rubella HOM05D001982 ORTHO05D003938 4.5e-27 124.8 74 81.1
BcaC03g13215 Brassica carinata HOM05D001982 ORTHO05D003938 5.8e-27 124.4 76 80.3
EL10Ac9g22963 Beta vulgaris HOM05D001982 ORTHO05D003938 7.6e-27 124.0 73 82.2
A10p28380 Brassica napus HOM05D001982 ORTHO05D003938 7.6e-27 124.0 76 80.3
Manes.04G053480 Manihot esculenta HOM05D001982 ORTHO05D003938 7.6e-27 124.0 73 82.2
Sabra05G0075300 Salix brachista HOM05D001982 ORTHO05D003938 1.0e-26 123.6 73 82.2
Sp2g23900 Schrenkiella parvula HOM05D001982 ORTHO05D003938 1.0e-26 123.6 74 79.7
Sc06g0006770 Simmondsia chinensis HOM05D001982 ORTHO05D003938 1.0e-26 123.6 73 80.8
Solyc02g005350.3 Solanum lycopersicum HOM05D001982 ORTHO05D003938 1.0e-26 123.6 72 81.9
Sopen02g001820 Solanum pennellii HOM05D001982 ORTHO05D003938 1.0e-26 123.6 72 81.9
C02p03480 Brassica napus HOM05D001982 ORTHO05D003938 1.3e-26 123.2 76 78.9
BolC2t06309H Brassica oleracea HOM05D001982 ORTHO05D003938 1.3e-26 123.2 76 78.9
BraA02t04948Z Brassica rapa HOM05D001982 ORTHO05D003938 1.3e-26 123.2 76 78.9
CAN.G39.9 Capsicum annuum HOM05D001982 ORTHO05D003938 1.3e-26 123.2 72 80.6
TPR.G19874 Trifolium pratense HOM05D001982 ORTHO05D003938 1.3e-26 123.2 74 79.7
BcaB01g05616 Brassica carinata HOM05D001982 ORTHO05D003938 1.7e-26 122.9 76 78.9
BraA10t44885Z Brassica rapa HOM05D001982 ORTHO05D003938 1.7e-26 122.9 76 78.9
Thhalv10013993m.g Eutrema salsugineum HOM05D001982 ORTHO05D003938 1.7e-26 122.9 76 78.9
Nitab4.5_0000069g0360 Nicotiana tabacum HOM05D001982 ORTHO05D003938 1.7e-26 122.9 73 79.5
Nitab4.5_0004301g0040 Nicotiana tabacum HOM05D001982 ORTHO05D003938 1.7e-26 122.9 73 79.5
Peaxi162Scf00021g01916 Petunia axillaris HOM05D001982 ORTHO05D003938 1.7e-26 122.9 73 79.5
Sp6g34660 Schrenkiella parvula HOM05D001982 ORTHO05D003938 1.7e-26 122.9 76 78.9
Cc11_g03450 Coffea canephora HOM05D001982 ORTHO05D003938 2.2e-26 122.5 73 79.5
Peaxi162Scf00334g00321 Petunia axillaris HOM05D001982 ORTHO05D003938 2.2e-26 122.5 73 79.5
THA.LOC104819374 Tarenaya hassleriana HOM05D001982 ORTHO05D003938 2.2e-26 122.5 74 79.7
BcaB08g37266 Brassica carinata HOM05D001982 ORTHO05D003938 2.9e-26 122.1 76 78.9
C03p04220 Brassica napus HOM05D001982 ORTHO05D003938 2.9e-26 122.1 76 78.9
BolC3t12954H Brassica oleracea HOM05D001982 ORTHO05D003938 2.9e-26 122.1 76 78.9
HPP92_020368 Vanilla planifolia HOM05D001982 ORTHO05D003938 2.9e-26 122.1 73 80.8
AL6G18700 Arabidopsis lyrata HOM05D001982 ORTHO05D003938 3.8e-26 121.7 76 78.9
Carub.0006s0718 Capsella rubella HOM05D001982 ORTHO05D003938 3.8e-26 121.7 76 78.9
Thhalv10004347m.g Eutrema salsugineum HOM05D001982 ORTHO05D003938 3.8e-26 121.7 74 79.7
Os07g0577700 Oryza sativa ssp. japonica HOM05D001982 ORTHO05D003938 3.8e-26 121.7 74 79.7
AT5G08300 Arabidopsis thaliana HOM05D001982 ORTHO05D003938 6.5e-26 120.9 76 78.9
C09p68640 Brassica napus HOM05D001982 ORTHO05D003938 6.5e-26 120.9 76 77.6
BolC9t59610H Brassica oleracea HOM05D001982 ORTHO05D003938 6.5e-26 120.9 76 77.6
Sabra12G0024700 Salix brachista HOM05D001982 ORTHO05D003938 6.5e-26 120.9 84 75.0
A03p03740 Brassica napus HOM05D001982 ORTHO05D003938 8.4e-26 120.6 76 77.6
BraA03t09721Z Brassica rapa HOM05D001982 ORTHO05D003938 8.4e-26 120.6 76 77.6
CBR_g3058 Chara braunii HOM05D001982 ORTHO05D003938 1.1e-25 120.2 73 75.3
CARHR204830 Cardamine hirsuta HOM05D001982 ORTHO05D003938 1.4e-25 119.8 76 77.6
Hund08610 Selenicereus undatus HOM05D001982 ORTHO05D003938 1.9e-25 119.4 73 76.7
Zm00001eb107590 Zea mays HOM05D001982 ORTHO05D003938 1.9e-25 119.4 74 77.0
Eucgr.H00643 Eucalyptus grandis HOM05D001982 ORTHO05D003938 5.5e-25 117.9 76 76.3
Pp3c14_8260 Physcomitrium patens HOM05D001982 ORTHO05D003938 2.1e-24 115.9 73 74.0
Pp3c10_7710 Physcomitrium patens HOM05D001982 ORTHO05D003938 1.0e-23 113.6 73 72.6
SEGI_03896 Sequoiadendron giganteum HOM05D001982 ORTHO05D003938 3.0e-23 112.1 94 63.8
Ah.01g001460 Amaranthus hybridus HOM05D003155 ORTHO05D003938 6.7e-23 110.9 65 83.1
Cre03.g193850 Chlamydomonas reinhardtii HOM05D001982 ORTHO05D003938 8.7e-23 110.5 72 70.8
Nitab4.5_0000661g0020 Nicotiana tabacum HOM05D001982 ORTHO05D003938 5.7e-22 107.8 72 75.0
Pp3c6_7570 Physcomitrium patens HOM05D001982 ORTHO05D003938 1.6e-21 106.3 71 69.0
MCO01G301 Micromonas commoda HOM05D001982 ORTHO05D003938 4.8e-21 104.8 73 65.8
CDE04G3537 Ceratophyllum demersum HOM05D001982 ORTHO05D003938 6.3e-21 104.4 60 86.7
CDE02G0698 Ceratophyllum demersum HOM05D001982 ORTHO05D003938 1.4e-20 103.2 72 76.4
Aa31LG3G18270 Aethionema arabicum HOM05D001982 ORTHO05D003938 5.3e-20 101.3 118 50.0
PRCOL_00000620 Prasinoderma coloniale HOM05D001982 ORTHO05D003938 2.6e-19 99.0 73 63.0
Haze_27086 Corylus avellana HOM05D001982 ORTHO05D003938 2.1e-16 89.4 74 56.8
Cfa024566 Carpinus fangiana HOM05D001982 ORTHO05D003938 6.7e-15 84.3 68 60.3
vmacro16028 Vaccinium macrocarpon HOM05D001982 ORTHO05D003938 2.2e-13 79.3 44 90.9
Lsat_1_v5_gn_6_100460 Lactuca sativa HOM05D001982 ORTHO05D003938 2.8e-13 79.0 54 74.1
Haze_27382 Corylus avellana HOM05D001982 ORTHO05D003938 4.1e-12 75.1 79 46.8
Ca_28958_v3 Cicer arietinum L. HOM05D001982 ORTHO05D003938 5.9e-11 71.2 56 60.7
Cfa021785 Carpinus fangiana HOM05D001982 ORTHO05D003938 1.0e-07 60.5 78 38.5
Dinv11727 Davidia involucrata HOM05D001982 ORTHO05D003938 6.7e-07 57.8 30 86.7
Lj1g0018388 Lotus japonicus HOM05D001982 ORTHO05D003938 1.1e-06 57.0 28 89.3
vmacro16027 Vaccinium macrocarpon HOM05D001982 ORTHO05D003938 2.0e-06 56.2 30 80.0
AT5G23250 Arabidopsis thaliana HOM05D001982 ORTHO05D003938 7.4e-06 54.3 28 78.6


User provided reference genes

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