Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3820 Papaver somniferum HOM05D006439 ORTHO05D008152 0.0e+00 1835.5 947 100.0
Nn2g14057 Nelumbo nucifera HOM05D006439 ORTHO05D008152 8.7e-275 950.7 968 55.6
QL07p039851 Quercus lobata HOM05D006439 ORTHO05D008152 8.8e-259 897.5 947 51.6
GSVIVG01033817001 Vitis vinifera HOM05D006439 ORTHO05D008152 9.4e-253 877.5 1010 48.2
Hma1.2p1_0232F.1_g097640 Hydrangea macrophylla HOM05D006439 ORTHO05D008152 1.2e-252 877.1 967 48.9
Cfa016567 Carpinus fangiana HOM05D006439 ORTHO05D008152 2.7e-252 875.9 968 50.1
CiPaw.09G010200 Carya illinoinensis HOM05D006439 ORTHO05D008152 4.5e-247 858.6 974 49.4
Prupe.7G115000 Prunus persica HOM05D006439 ORTHO05D008152 5.5e-237 825.1 942 48.3
TWI74G0883 Tripterygium wilfordii HOM05D006439 ORTHO05D008152 1.2e-236 823.9 966 46.6
MD12G1021400 Malus domestica HOM05D006439 ORTHO05D008152 3.6e-236 822.4 972 46.0
Manes.08G022900 Manihot esculenta HOM05D006439 ORTHO05D008152 1.8e-235 820.1 956 47.5
Lalb_Chr01g0018261 Lupinus albus HOM05D006439 ORTHO05D008152 2.7e-231 806.2 979 45.6
Gorai.007G371000 Gossypium raimondii HOM05D006439 ORTHO05D008152 1.7e-230 803.5 979 45.8
FAN02G3052 Fragaria x ananassa HOM05D006439 ORTHO05D008152 8.6e-230 801.2 1016 44.4
Lj1g0012097 Lotus japonicus HOM05D006439 ORTHO05D008152 8.6e-230 801.2 954 45.8
Glyma.03G192900 Glycine max HOM05D006439 ORTHO05D008152 1.1e-229 800.8 979 44.3
Phvul.001G188000 Phaseolus vulgaris HOM05D006439 ORTHO05D008152 1.8e-224 783.5 956 45.4
Psat3g034720 Pisum sativum HOM05D006439 ORTHO05D008152 9.2e-224 781.2 982 44.9
arahy.Tifrunner.gnm1.ann1.YQ8CLY Arachis hypogaea HOM05D006439 ORTHO05D008152 2.3e-222 776.5 1002 44.2
THA.LOC104823488 Tarenaya hassleriana HOM05D006439 ORTHO05D008152 4.3e-221 772.3 969 43.3
TPR.G19544 Trifolium pratense HOM05D006439 ORTHO05D008152 7.3e-221 771.5 980 45.2
arahy.Tifrunner.gnm1.ann1.JQB9X3 Arachis hypogaea HOM05D006439 ORTHO05D008152 6.1e-220 768.5 1008 43.6
Sopen10g035010 Solanum pennellii HOM05D006439 ORTHO05D008152 6.1e-220 768.5 966 45.2
Medtr7g104170 Medicago truncatula HOM05D006439 ORTHO05D008152 3.4e-218 762.7 983 44.3
Gohir.A11G321900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 2.9e-217 759.6 922 46.1
Solyc10g085600.2 Solanum lycopersicum HOM05D006439 ORTHO05D008152 3.7e-217 759.2 966 44.9
HanXRQChr09g0247281 Helianthus annuus HOM05D006439 ORTHO05D008152 7.0e-216 755.0 935 44.8
Migut.L01768 Erythranthe guttata HOM05D006439 ORTHO05D008152 9.2e-216 754.6 940 45.3
Cc06_g05440 Coffea canephora HOM05D006439 ORTHO05D008152 4.7e-212 742.3 914 44.1
FAN14G3294 Fragaria x ananassa HOM05D006439 ORTHO05D008152 1.9e-208 730.3 967 43.6
AT2G36370 Arabidopsis thaliana HOM05D006439 ORTHO05D008152 5.4e-208 728.8 967 42.8
AL4G32530 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 1.2e-207 727.6 966 42.5
ECA233G3232 Erigeron canadensis HOM05D006439 ORTHO05D008152 1.2e-207 727.6 942 43.1
Haze_19565 Corylus avellana HOM05D006439 ORTHO05D008152 4.6e-207 725.7 1009 44.5
BolC4t28018H Brassica oleracea HOM05D006439 ORTHO05D008152 1.0e-206 724.5 964 43.0
BcaC02g07604 Brassica carinata HOM05D006439 ORTHO05D008152 6.6e-206 721.8 962 42.6
CARHR130670 Cardamine hirsuta HOM05D006439 ORTHO05D008152 6.6e-206 721.8 941 43.6
Lsat_1_v5_gn_6_69500 Lactuca sativa HOM05D006439 ORTHO05D008152 1.4e-203 714.1 871 44.5
BcaB06g28933 Brassica carinata HOM05D006439 ORTHO05D008152 6.8e-203 711.8 974 41.7
A04p27880 Brassica napus HOM05D006439 ORTHO05D008152 8.9e-203 711.4 905 43.4
Duzib093G0471 Durio zibethinus HOM05D006439 ORTHO05D008152 2.0e-202 710.3 987 42.4
BraA04t18280Z Brassica rapa HOM05D006439 ORTHO05D008152 7.5e-202 708.4 906 43.4
Gohir.D11G340900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 7.8e-199 698.4 853 45.5
Thhalv10017885m.g Eutrema salsugineum HOM05D006439 ORTHO05D008152 9.5e-197 691.4 914 42.3
SGA_v2.0_scaffold184G39949 Striga asiatica HOM05D006439 ORTHO05D008152 6.8e-195 685.3 1029 39.7
Sc07g0005420 Simmondsia chinensis HOM05D006439 ORTHO05D008152 7.1e-192 675.2 854 45.0
PSO801G0048 Papaver somniferum HOM05D006439 ORTHO05D008152 9.2e-192 674.9 767 50.1
Peaxi162Scf00146g00718 Petunia axillaris HOM05D006439 ORTHO05D008152 5.6e-189 665.6 922 42.1
Actinidia31281 Actinidia chinensis HOM05D006439 ORTHO05D008152 3.4e-186 656.4 842 45.1
RcHm_v2.0_Chr3g0472491 Rosa chinensis HOM05D006439 ORTHO05D008152 3.0e-182 643.3 761 47.8
Aqoxy2G01352 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 2.1e-180 637.1 654 53.1
Oeu034357.1 Olea europaea HOM05D006439 ORTHO05D008152 4.8e-180 636.0 1015 39.4
Os01g0968600 Oryza sativa ssp. japonica HOM05D006439 ORTHO05D008152 7.6e-178 628.6 971 40.0
Cpa.g.sc5.59 Carica papaya HOM05D006439 ORTHO05D008152 3.5e-175 619.8 955 40.6
Aa31LG5G21550 Aethionema arabicum HOM05D006439 ORTHO05D008152 2.1e-172 610.5 965 39.6
EL10Ac7g16960 Beta vulgaris HOM05D006439 ORTHO05D008152 7.6e-170 602.1 893 40.5
Sp4g18660 Schrenkiella parvula HOM05D006439 ORTHO05D008152 2.1e-167 594.0 796 42.5
FvH4_6g18170 Fragaria vesca HOM05D006439 ORTHO05D008152 7.9e-167 592.0 931 38.1
Ca_08981_v3 Cicer arietinum L. HOM05D006439 ORTHO05D008152 3.9e-166 589.7 786 43.9
Ciclev10011131m.g Citrus clementina HOM05D006439 ORTHO05D008152 6.2e-164 582.4 754 45.4
AUR62028585 Chenopodium quinoa HOM05D006439 ORTHO05D008152 1.6e-159 567.8 897 38.6
PGR142G3529 Punica granatum HOM05D006439 ORTHO05D008152 1.6e-159 567.8 830 41.2
SalBow5G0766 Salvia bowleyana HOM05D006439 ORTHO05D008152 1.8e-158 564.3 802 40.1
HPP92_005462 Vanilla planifolia HOM05D006439 ORTHO05D008152 9.7e-157 558.5 984 37.1
CAN.G1099.9 Capsicum annuum HOM05D006439 ORTHO05D008152 6.9e-155 552.4 767 43.8
Thecc.05G084500 Theobroma cacao HOM05D006439 ORTHO05D008152 3.6e-151 540.0 653 46.6
VMungo1383G0775 Vigna mungo HOM05D006439 ORTHO05D008152 3.6e-151 540.0 673 46.2
Ah.15g091040 Amaranthus hybridus HOM05D006439 ORTHO05D008152 6.9e-147 525.8 826 40.2
TAR623G1631 Trochodendron aralioides HOM05D006439 ORTHO05D008152 6.7e-142 509.2 534 53.4
vmacro08831 Vaccinium macrocarpon HOM05D006439 ORTHO05D008152 1.0e-137 495.4 656 43.9
Nitab4.5_0000381g0240 Nicotiana tabacum HOM05D006439 ORTHO05D008152 4.4e-133 479.9 807 37.3
DCAR_009146 Daucus carota HOM05D006439 ORTHO05D008152 6.5e-129 466.1 863 35.8
Atru.chr8.1601 Acer truncatum HOM05D006439 ORTHO05D008152 4.1e-123 446.8 482 50.2
Atru.chr8.1600 Acer truncatum HOM05D006439 ORTHO05D008152 2.3e-118 431.0 493 47.9
Dinv21235 Davidia involucrata HOM05D000103 ORTHO05D008152 6.3e-108 396.4 395 53.7
Dinv21234 Davidia involucrata HOM05D006439 ORTHO05D008152 8.6e-105 386.0 411 49.1
MBI17_g23163_MAGBIO Magnolia biondii HOM05D006439 ORTHO05D008152 6.1e-103 379.8 843 33.5
Carub.0004s1817 Capsella rubella HOM05D006439 ORTHO05D008152 1.4e-102 378.6 480 45.2
Rhsim04G0133900 Rhododendron simsii HOM05D006439 ORTHO05D008152 4.4e-101 373.6 356 53.9
Zm00001eb139990 Zea mays HOM05D006439 ORTHO05D008152 1.9e-96 358.2 622 38.9
CSS0038647 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 2.9e-92 344.4 283 60.8
QL11p044009 Quercus lobata HOM05D006439 ORTHO05D009270 9.2e-91 339.3 522 40.2
Carub.0004s1816 Capsella rubella HOM05D006439 ORTHO05D008152 6.4e-84 316.6 409 42.5
Pp3c16_1040 Physcomitrium patens HOM05D006439 ORTHO05D008152 1.2e-79 302.4 925 28.9
Mapoly0116s0006 Marchantia polymorpha HOM05D006439 ORTHO05D008152 6.6e-73 280.0 940 26.1
Nitab4.5_0005447g0020 Nicotiana tabacum HOM05D006439 ORTHO05D008152 3.8e-68 264.2 498 34.7
Lj3A1001T30 Lonicera japonica HOM05D006439 ORTHO05D008152 9.0e-62 243.0 251 53.0
SMO238G0046 Selaginella moellendorffii HOM05D006439 ORTHO05D008152 9.9e-61 239.6 863 24.7
AagrBONN_evm.TU.Sc2ySwM_117.1948 Anthoceros agrestis HOM05D006439 ORTHO05D008152 8.4e-60 236.5 873 26.5
VMungo1383G1144 Vigna mungo HOM05D006439 ORTHO05D008152 3.4e-53 214.5 221 46.6
RcHm_v2.0_Chr3g0472501 Rosa chinensis HOM05D006439 ORTHO05D008152 2.5e-51 208.4 182 51.6
QL07p039868 Quercus lobata HOM05D006439 ORTHO05D008152 3.3e-48 198.0 197 54.8
PGSC0003DMG402008399 Solanum tuberosum HOM05D006439 ORTHO05D008152 2.1e-47 195.3 171 52.6
Ciclev10013912m.g Citrus clementina HOM05D006439 ORTHO05D008152 4.8e-47 194.1 174 58.0
SEGI_26522 Sequoiadendron giganteum HOM05D006439 ORTHO05D000001 3.1e-46 191.4 209 48.8
Lj3A1001G26 Lonicera japonica HOM05D006439 ORTHO05D008152 2.5e-43 181.8 206 45.6
Aqoxy2G01351 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 3.0e-41 174.9 182 50.5
Lj3A1001T29 Lonicera japonica HOM05D006439 ORTHO05D008152 3.6e-34 151.4 324 33.0
TAR623G0848 Trochodendron aralioides HOM05D006439 ORTHO05D008152 6.7e-33 147.1 108 61.1
Nitab4.5_0000381g0270 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.6e-29 135.2 123 49.6
CAN.G1099.8 Capsicum annuum HOM05D006439 ORTHO05D008152 1.7e-28 132.5 128 47.7
SEGI_37059 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.2e-26 126.3 141 44.7
VMungo1127G2301 Vigna mungo HOM05D006439 ORTHO05D008152 2.0e-24 119.0 208 37.5
AL4G34520 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 5.7e-24 117.5 180 37.8
FAN09G3024 Fragaria x ananassa HOM05D006439 ORTHO05D008152 1.4e-22 112.8 158 39.2
SEGI_31112 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.2e-21 109.8 273 30.8
CSS0030357 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 2.6e-21 108.6 170 40.6
Lj3A1001T31 Lonicera japonica HOM05D006439 ORTHO05D008152 1.5e-19 102.8 97 51.5
AUR62028586 Chenopodium quinoa HOM05D006439 ORTHO05D008152 7.2e-19 100.5 95 44.2
Thecc.10G111400 Theobroma cacao HOM05D006439 ORTHO05D008152 4.0e-17 94.7 76 60.5
SEGI_02684 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.8e-14 85.9 102 41.2
SEGI_31670 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.2e-10 73.2 116 36.2
AUR62033535 Chenopodium quinoa HOM05D006439 ORTHO05D008152 4.7e-10 71.2 75 44.0
AL4G34560 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 2.3e-09 68.9 158 28.5
SEGI_01774 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 5.2e-09 67.8 82 40.2
ECA232G2349 Erigeron canadensis HOM05D006439 ORTHO05D008321 1.7e-07 62.8 66 45.5
Psat6g076200 Pisum sativum HOM05D006439 ORTHO05D008152 1.7e-07 62.8 47 55.3
CSS0035414 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 2.2e-07 62.4 84 39.3


User provided reference genes

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