Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3605 Papaver somniferum HOM05D000002 ORTHO05D009184 8.3e-140 500.4 252 100.0
QL02p054488 Quercus lobata HOM05D000002 ORTHO05D000001 1.8e-62 243.4 249 51.8
CSS0015301 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-59 233.8 250 53.2
CSS0022698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-59 233.8 250 53.2
CSS0018707 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-58 229.6 250 52.4
TAR654G0001 Trochodendron aralioides HOM05D000002 ORTHO05D009184 8.0e-58 228.0 223 51.6
QL10p046058 Quercus lobata HOM05D000002 ORTHO05D000001 2.0e-53 213.4 226 50.4
Thhalv10023107m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 3.5e-53 212.6 225 50.2
QL05p080279 Quercus lobata HOM05D000002 ORTHO05D009184 3.8e-52 209.1 256 46.1
PSO541G2535 Papaver somniferum HOM05D000002 ORTHO05D009184 1.0e-49 201.1 209 49.3
HanXRQChr16g0510691 Helianthus annuus HOM05D000002 ORTHO05D009184 3.0e-49 199.5 224 48.2
PSO832G0651 Papaver somniferum HOM05D000002 ORTHO05D009184 1.5e-48 197.2 223 46.2
TWI79G1259 Tripterygium wilfordii HOM05D000002 ORTHO05D009184 2.2e-47 193.4 200 52.5
COL.COLO4_26578 Corchorus olitorius HOM05D000002 ORTHO05D009184 3.7e-47 192.6 251 43.0
Thhalv10003344m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 1.4e-46 190.7 239 46.0
COL.COLO4_27409 Corchorus olitorius HOM05D000002 ORTHO05D009184 5.2e-41 172.2 202 43.6
CSS0029189 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-40 170.2 189 52.9
Thhalv10001136m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 1.7e-39 167.2 173 49.7
Thhalv10029402m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 2.4e-38 163.3 173 48.0
Hund23381 Selenicereus undatus HOM05D000002 ORTHO05D009184 1.1e-35 154.5 244 37.7
Thhalv10002214m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 5.5e-35 152.1 183 48.6
Nitab4.5_0007418g0040 Nicotiana tabacum HOM05D000002 ORTHO05D009184 4.0e-33 146.0 169 48.5
COL.COLO4_22322 Corchorus olitorius HOM05D000002 ORTHO05D009184 5.2e-33 145.6 207 40.6
COL.COLO4_34309 Corchorus olitorius HOM05D000002 ORTHO05D009184 2.6e-32 143.3 251 37.5
Thhalv10003350m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 5.4e-30 135.6 155 44.5
PGSC0003DMG400045785 Solanum tuberosum HOM05D000002 ORTHO05D009184 7.0e-30 135.2 150 50.0
Nitab4.5_0010916g0030 Nicotiana tabacum HOM05D000002 ORTHO05D009184 7.8e-29 131.7 125 54.4
Hund00625 Selenicereus undatus HOM05D000002 ORTHO05D009184 1.0e-28 131.3 214 36.9
Hund15821 Selenicereus undatus HOM05D000002 ORTHO05D009184 1.0e-25 121.3 232 32.8
Nitab4.5_0002476g0030 Nicotiana tabacum HOM05D000002 ORTHO05D009184 2.9e-23 113.2 121 52.1
COL.COLO4_05739 Corchorus olitorius HOM05D000002 ORTHO05D009184 1.4e-22 110.9 149 42.3
COL.COLO4_15229 Corchorus olitorius HOM05D000002 ORTHO05D009184 5.4e-22 109.0 226 31.9
Oeu035362.1 Olea europaea HOM05D000002 ORTHO05D009184 7.0e-22 108.6 135 44.4
Rhsim10G0063800 Rhododendron simsii HOM05D000345 ORTHO05D009184 1.2e-21 107.8 147 40.1
PSO675G0504 Papaver somniferum HOM05D000002 ORTHO05D000001 1.6e-21 107.5 153 41.8
Rhsim09G0157400 Rhododendron simsii HOM05D000002 ORTHO05D009184 7.8e-21 105.1 106 52.8
COL.COLO4_32152 Corchorus olitorius HOM05D000002 ORTHO05D009184 1.3e-20 104.4 137 45.3
Rhsim02G0158100 Rhododendron simsii HOM05D000002 ORTHO05D009184 1.5e-19 100.9 109 47.7
CSS0011631 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-19 100.5 191 29.8
Oeu057114.1 Olea europaea HOM05D000002 ORTHO05D009184 7.3e-19 98.6 115 50.4
Oeu040982.1 Olea europaea HOM05D000002 ORTHO05D009184 1.2e-18 97.8 88 55.7
QL05p052824 Quercus lobata HOM05D000002 ORTHO05D000001 1.2e-18 97.8 159 40.3
CSS0018210 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-18 97.1 191 28.8
Nitab4.5_0000352g0030 Nicotiana tabacum HOM05D000002 ORTHO05D009184 3.6e-18 96.3 109 47.7
Cpa.g.sc57.43 Carica papaya HOM05D000002 ORTHO05D009184 6.2e-18 95.5 140 36.4
MBI18_g39488_MAGBIO Magnolia biondii HOM05D011675 ORTHO05D014657 2.3e-17 93.6 223 28.7
Rhsim01G0134100 Rhododendron simsii HOM05D002709 ORTHO05D000001 3.1e-17 93.2 205 27.8
Nitab4.5_0002656g0070 Nicotiana tabacum HOM05D000002 ORTHO05D009184 4.0e-17 92.8 106 46.2
Hund31208 Selenicereus undatus HOM05D000002 ORTHO05D009184 5.2e-17 92.4 203 32.5
CSS0033242 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.8e-17 92.0 191 27.7
RhsimUnG0229800 Rhododendron simsii HOM05D000002 ORTHO05D009184 1.5e-16 90.9 100 53.0
Sopen09g018840 Solanum pennellii HOM05D001078 ORTHO05D000034 2.6e-16 90.1 84 57.1
CSS0024584 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-16 89.7 182 29.1
Rhsim08G0142800 Rhododendron simsii HOM05D000002 ORTHO05D009184 5.8e-16 89.0 103 50.5
TAR623G0124 Trochodendron aralioides HOM05D000002 ORTHO05D009184 5.8e-16 89.0 235 26.8
Hund16236 Selenicereus undatus HOM05D003328 ORTHO05D003722 7.5e-16 88.6 262 29.4
TAR174G0002 Trochodendron aralioides HOM05D000002 ORTHO05D009184 1.3e-15 87.8 171 29.8
CSS0038381 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D009184 1.7e-15 87.4 90 47.8
Nitab4.5_0005334g0020 Nicotiana tabacum HOM05D000002 ORTHO05D009184 1.7e-15 87.4 75 54.7
Hund24896 Selenicereus undatus HOM05D000002 ORTHO05D009184 1.7e-15 87.4 171 33.9
COL.COLO4_12798 Corchorus olitorius HOM05D000002 ORTHO05D009184 2.2e-15 87.0 251 27.5
Hund21145 Selenicereus undatus HOM05D000002 ORTHO05D009184 4.9e-15 85.9 236 28.8
COL.COLO4_04258 Corchorus olitorius HOM05D000002 ORTHO05D009184 6.4e-15 85.5 71 56.3
TWI56G0460 Tripterygium wilfordii HOM05D008880 ORTHO05D001544 6.4e-15 85.5 232 27.2
COL.COLO4_28640 Corchorus olitorius HOM05D000002 ORTHO05D009184 8.3e-15 85.1 153 37.9
Rhsim01G0147900 Rhododendron simsii HOM05D000002 ORTHO05D009184 8.3e-15 85.1 99 50.5
Rhsim07G0144200 Rhododendron simsii HOM05D000111 ORTHO05D000134 8.3e-15 85.1 82 53.7
COL.COLO4_37841 Corchorus olitorius HOM05D000002 ORTHO05D009184 1.1e-14 84.7 120 42.5
RhsimUnG0242900 Rhododendron simsii HOM05D005456 ORTHO05D006805 1.4e-14 84.3 78 55.1
TWI34G1618 Tripterygium wilfordii HOM05D008880 ORTHO05D001544 1.9e-14 84.0 192 30.7
Rhsim02G0155100 Rhododendron simsii HOM05D000002 ORTHO05D009184 3.2e-14 83.2 91 51.6
Rhsim10G0112700 Rhododendron simsii HOM05D000002 ORTHO05D009184 3.2e-14 83.2 78 53.8
Hund15077 Selenicereus undatus HOM05D000002 ORTHO05D009184 3.2e-14 83.2 195 28.7
Oeu008281.1 Olea europaea HOM05D000002 ORTHO05D009184 1.6e-13 80.9 105 46.7
Rhsim09G0070700 Rhododendron simsii HOM05D000002 ORTHO05D009184 2.1e-13 80.5 96 49.0
Rhsim11G0013900 Rhododendron simsii HOM05D000002 ORTHO05D009184 2.1e-13 80.5 74 55.4
Nn2g13203 Nelumbo nucifera HOM05D001889 ORTHO05D000001 3.5e-13 79.7 160 27.5
Nitab4.5_0009106g0030 Nicotiana tabacum HOM05D000002 ORTHO05D009184 3.5e-13 79.7 69 58.0
PGSC0003DMG400004248 Solanum tuberosum HOM05D000002 ORTHO05D009184 3.5e-13 79.7 67 58.2
TWI53G0611 Tripterygium wilfordii HOM05D000002 ORTHO05D001544 4.6e-13 79.3 173 27.7
COL.COLO4_28342 Corchorus olitorius HOM05D000002 ORTHO05D009184 7.8e-13 78.6 95 49.5
RhsimUnG0017000 Rhododendron simsii HOM05D000002 ORTHO05D009184 7.8e-13 78.6 79 51.9
Dinv09648 Davidia involucrata HOM05D000002 ORTHO05D009184 1.3e-12 77.8 197 25.4
Sopen03g010200 Solanum pennellii HOM05D000002 ORTHO05D009184 1.3e-12 77.8 85 51.8
RhsimUnG0133800 Rhododendron simsii HOM05D000002 ORTHO05D009184 2.3e-12 77.0 79 50.6
QL05p045937 Quercus lobata HOM05D000002 ORTHO05D009184 3.0e-12 76.6 197 23.4
Hund24530 Selenicereus undatus HOM05D000002 ORTHO05D009184 3.0e-12 76.6 213 30.5
Hund26216 Selenicereus undatus HOM05D000002 ORTHO05D009184 3.9e-12 76.3 111 39.6
Hund05632 Selenicereus undatus HOM05D000002 ORTHO05D009184 5.1e-12 75.9 102 40.2
Hund30999 Selenicereus undatus HOM05D016537 ORTHO05D009184 5.1e-12 75.9 174 32.8
Hund23444 Selenicereus undatus HOM05D000002 ORTHO05D009184 1.1e-11 74.7 107 41.1
Hund31012 Selenicereus undatus HOM05D000002 ORTHO05D009184 1.9e-11 73.9 174 32.2
Rhsim02G0157300 Rhododendron simsii HOM05D000002 ORTHO05D009184 2.5e-11 73.6 91 47.3
Hund22099 Selenicereus undatus HOM05D026553 ORTHO05D009184 4.3e-11 72.8 99 41.4
COL.COLO4_11084 Corchorus olitorius HOM05D035273 ORTHO05D000001 5.6e-11 72.4 176 27.3
Sopen10g012010 Solanum pennellii HOM05D000002 ORTHO05D009184 5.6e-11 72.4 94 42.6
Sopen10g016600 Solanum pennellii HOM05D000002 ORTHO05D001544 5.6e-11 72.4 242 27.3
Sopen07g019940 Solanum pennellii HOM05D008880 ORTHO05D001544 9.5e-11 71.6 242 27.3
RcHm_v2.0_Chr5g0070531 Rosa chinensis HOM05D000279 ORTHO05D000957 1.2e-10 71.2 170 25.9
Sopen01g006740 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-10 71.2 242 27.3
Sopen01g021410 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-10 71.2 242 27.3
Sopen02g017450 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-10 71.2 242 27.3
Sopen04g011600 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-10 71.2 242 27.3
Sopen04g018310 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-10 71.2 242 27.3
Sopen04g023650 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-10 71.2 242 27.3
Sopen04g026340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-10 71.2 242 27.3
Sopen05g021830 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-10 71.2 242 27.3
Sopen09g020870 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-10 71.2 242 27.3
Sopen11g015120 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-10 71.2 242 27.3
Sopen11g015130 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-10 71.2 242 27.3
Sopen12g003850 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-10 71.2 242 27.3
Sopen12g003860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-10 71.2 242 27.3
Sopen12g023960 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-10 71.2 242 27.3
Sopen12g023970 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-10 71.2 242 27.3
Sopen05g009710 Solanum pennellii HOM05D000002 ORTHO05D000001 4.7e-10 69.3 242 26.9
Sopen05g028350 Solanum pennellii HOM05D000002 ORTHO05D000001 4.7e-10 69.3 249 25.3
Sopen07g002700 Solanum pennellii HOM05D000002 ORTHO05D000001 4.7e-10 69.3 242 26.9
AagrBONN_evm.TU.Sc2ySwM_228.3848 Anthoceros agrestis HOM05D000002 ORTHO05D000001 8.1e-10 68.6 206 21.4
Hund24805 Selenicereus undatus HOM05D000002 ORTHO05D009184 8.1e-10 68.6 153 30.7
Sopen11g023840 Solanum pennellii HOM05D000002 ORTHO05D000001 8.1e-10 68.6 241 26.1
Sopen10g013010 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-09 68.2 242 27.3
AagrBONN_evm.TU.Sc2ySwM_369.364 Anthoceros agrestis HOM05D000002 ORTHO05D000001 1.4e-09 67.8 223 21.1
FvH4_3g39132 Fragaria vesca HOM05D000002 ORTHO05D000001 1.8e-09 67.4 151 24.5
CSS0000004 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-09 66.6 78 51.3
CSS0048183 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.8e-09 65.5 78 50.0
SGA_v2.0_scaffold43G16507 Striga asiatica HOM05D000002 ORTHO05D000001 6.8e-09 65.5 221 29.9
Sopen01g022730 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-08 64.7 197 24.4
Hund00834 Selenicereus undatus HOM05D003918 ORTHO05D004494 2.6e-08 63.5 108 37.0
Nitab4.5_0003778g0040 Nicotiana tabacum HOM05D000002 ORTHO05D009184 4.4e-08 62.8 143 32.2
Rhsim09G0205400 Rhododendron simsii HOM05D010628 ORTHO05D010877 5.8e-08 62.4 143 33.6
Atru.chr1.2215 Acer truncatum HOM05D000002 ORTHO05D000001 7.6e-08 62.0 188 22.9
RcHm_v2.0_Chr1g0375621 Rosa chinensis HOM05D000002 ORTHO05D001134 7.6e-08 62.0 224 22.3
Hund31103 Selenicereus undatus HOM05D000002 ORTHO05D009184 1.3e-07 61.2 157 30.6
Sopen01g028020 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-07 61.2 83 48.2
CAN.G1121.10 Capsicum annuum HOM05D000002 ORTHO05D000001 4.9e-07 59.3 184 24.5
MBI03_g38315_MAGBIO Magnolia biondii HOM05D007189 ORTHO05D014657 8.3e-07 58.5 187 24.1
CSS0024595 Camellia sinensis var. sinensis HOM05D001889 ORTHO05D001853 1.4e-06 57.8 230 23.0
Sopen11g011490 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-06 57.4 238 21.0
Hund17923 Selenicereus undatus HOM05D000002 ORTHO05D009184 3.2e-06 56.6 111 32.4
RcHm_v2.0_Chr3g0453771 Rosa chinensis HOM05D000002 ORTHO05D001134 4.1e-06 56.2 168 23.2
RcHm_v2.0_Chr1g0365511 Rosa chinensis HOM05D000002 ORTHO05D001134 5.4e-06 55.8 168 23.2
AagrBONN_evm.TU.Sc2ySwM_117.1229 Anthoceros agrestis HOM05D000002 ORTHO05D000001 7.1e-06 55.5 220 21.8
CSS0043320 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.1e-06 55.5 36 75.0
MD03G1006900 Malus domestica HOM05D000002 ORTHO05D000001 7.1e-06 55.5 163 28.2
Prupe.2G191300 Prunus persica HOM05D001889 ORTHO05D000001 7.1e-06 55.5 191 26.7
Hund31096 Selenicereus undatus HOM05D000002 ORTHO05D009184 7.1e-06 55.5 103 33.0
Lj2g0022154 Lotus japonicus HOM05D000002 ORTHO05D000001 9.2e-06 55.1 149 22.8
Prupe.2G191700 Prunus persica HOM05D001889 ORTHO05D001853 9.2e-06 55.1 191 24.1


User provided reference genes

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