Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 3.2e-259 897.9 452 100.0
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 6.3e-247 857.1 452 93.8
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 4.9e-143 511.9 453 59.8
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 1.0e-132 477.6 426 58.0
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 1.9e-131 473.4 438 54.1
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 3.3e-131 472.6 422 55.9
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 4.3e-131 472.2 438 55.9
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 1.3e-130 470.7 437 55.4
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 1.3e-130 470.7 424 55.9
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 1.7e-130 470.3 444 55.0
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 3.7e-130 469.2 445 55.3
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.8e-129 466.8 438 53.0
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 1.8e-129 466.8 423 55.1
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.3e-129 465.3 438 53.0
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 9.1e-129 464.5 424 56.4
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 1.2e-128 464.2 427 54.8
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 1.2e-128 464.2 417 55.6
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 4.5e-128 462.2 433 55.4
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 4.2e-126 455.7 418 54.5
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 2.7e-125 453.0 437 53.3
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 3.6e-125 452.6 420 56.2
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 1.4e-124 450.7 432 53.7
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 2.0e-123 446.8 417 53.2
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 7.4e-123 444.9 389 58.4
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 2.6e-120 436.4 450 52.2
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 2.9e-119 433.0 419 53.0
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 1.9e-118 430.3 419 52.5
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 4.2e-118 429.1 421 53.2
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 4.2e-118 429.1 419 52.5
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 4.7e-117 425.6 436 51.4
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 1.8e-116 423.7 496 48.2
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 2.3e-116 423.3 454 50.0
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 1.1e-115 421.0 419 52.0
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 3.3e-115 419.5 422 50.7
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 3.3e-115 419.5 417 50.8
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 4.4e-115 419.1 423 51.3
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 2.2e-114 416.8 419 51.1
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 2.8e-114 416.4 417 50.8
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 3.1e-113 412.9 417 50.6
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 3.1e-113 412.9 418 50.2
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 2.0e-112 410.2 418 50.2
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 2.6e-112 409.8 437 51.3
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 3.5e-112 409.5 416 49.8
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 1.3e-111 407.5 419 50.1
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 1.7e-111 407.1 452 47.1
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 1.7e-111 407.1 420 52.4
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 2.9e-111 406.4 450 47.1
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 3.8e-111 406.0 419 50.6
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 1.5e-110 404.1 442 47.3
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 1.9e-110 403.7 446 47.5
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 2.5e-110 403.3 423 49.2
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 2.5e-110 403.3 419 50.8
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 3.2e-110 402.9 460 47.4
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 5.5e-110 402.1 443 49.7
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 7.2e-110 401.7 419 50.1
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 1.2e-109 401.0 436 50.0
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 1.6e-109 400.6 419 50.1
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 6.1e-109 398.7 436 48.4
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 8.0e-109 398.3 464 45.9
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 2.3e-108 396.7 420 49.8
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 3.0e-108 396.4 338 57.4
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 6.7e-108 395.2 419 48.0
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 2.0e-107 393.7 441 47.6
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 4.4e-107 392.5 487 45.2
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 7.5e-107 391.7 531 41.4
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 7.5e-107 391.7 400 50.8
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 2.2e-106 390.2 436 48.4
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 6.3e-106 388.7 422 49.1
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 1.4e-105 387.5 323 58.2
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 5.3e-105 385.6 460 45.9
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 5.3e-105 385.6 317 57.7
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 1.2e-104 384.4 428 49.3
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 1.1e-102 377.9 418 47.8
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 2.1e-101 373.6 418 47.4
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 4.0e-100 369.4 415 47.5
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 8.8e-100 368.2 387 49.4
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 1.3e-98 364.4 424 44.6
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 2.8e-98 363.2 426 46.2
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 3.7e-98 362.8 422 46.7
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 4.5e-96 355.9 424 41.7
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 8.0e-93 345.1 457 44.9
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 2.0e-91 340.5 365 50.7
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 9.8e-91 338.2 324 55.2
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 4.5e-88 329.3 418 44.7
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 3.3e-86 323.2 418 45.0
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 2.5e-78 297.0 304 49.7
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.0e-75 287.3 439 41.5
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 3.4e-75 286.6 439 41.5
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.1e-73 279.6 453 40.4
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 2.5e-70 270.4 252 55.6
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 4.7e-69 266.2 419 40.3
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.1e-68 265.0 437 39.6
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 5.2e-68 262.7 416 37.7
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 3.4e-67 260.0 280 49.3
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 7.8e-64 248.8 437 37.8
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 1.3e-63 248.1 394 39.6
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 6.6e-63 245.7 394 39.3
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.7e-61 239.6 230 52.2
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 8.1e-61 238.8 304 43.8
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.9e-58 230.3 428 38.1
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 2.3e-55 220.7 208 53.8
QL04p010120 Quercus lobata HOM05D002214 ORTHO05D007367 7.6e-51 205.7 208 54.8
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 9.3e-49 198.7 201 50.7
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 4.6e-48 196.4 458 31.0
RcHm_v2.0_Chr6g0283161 Rosa chinensis HOM05D002214 ORTHO05D007367 1.9e-46 191.0 324 42.6
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 3.6e-45 186.8 221 45.2
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 2.6e-43 180.6 235 45.1
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 9.9e-43 178.7 242 40.9
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 9.9e-43 178.7 242 40.9
Hma1.2p1_0685F.1_g203270 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 1.7e-42 177.9 161 53.4
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 9.3e-41 172.2 426 25.6
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 2.7e-40 170.6 292 34.9
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 7.9e-40 169.1 227 44.1
Hund16633 Selenicereus undatus HOM05D002214 ORTHO05D007367 1.1e-38 165.2 161 49.7
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 2.5e-38 164.1 140 54.3
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.5e-35 153.3 141 52.5
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 6.4e-34 149.4 352 31.8
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 2.3e-31 141.0 352 30.4
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 1.4e-28 131.7 170 46.5
Aa31LG10G14900 Aethionema arabicum HOM05D002214 ORTHO05D007367 1.6e-24 118.2 130 45.4
Thecc.01G405800 Theobroma cacao HOM05D002214 ORTHO05D007367 7.9e-24 115.9 82 63.4
SEGI_07097 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 8.2e-21 105.9 137 43.8
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 2.4e-20 104.4 244 27.0
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 4.1e-20 103.6 92 55.4
Oeu016638.1 Olea europaea HOM05D002214 ORTHO05D007367 3.8e-18 97.1 114 43.9
Hma1.2p1_0685F.1_g203250 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 1.1e-12 79.0 121 41.3
Duzib133G0745 Durio zibethinus HOM05D002214 ORTHO05D007367 2.2e-10 71.2 70 50.0
FAN27G0866 Fragaria x ananassa HOM05D002214 ORTHO05D007367 9.4e-09 65.9 80 43.8
FAN24G0587 Fragaria x ananassa HOM05D002214 ORTHO05D045595 1.6e-08 65.1 98 39.8
Os04g0568400 Oryza sativa ssp. japonica HOM05D000645 ORTHO05D000494 5.1e-07 60.1 257 27.2
Cre07.g347900 Chlamydomonas reinhardtii HOM05D006479 ORTHO05D140102 4.4e-06 57.0 146 27.4
FAN24G2079 Fragaria x ananassa HOM05D002214 ORTHO05D007367 7.4e-06 56.2 46 52.2


User provided reference genes

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