Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 1.8e-142 509.2 251 100.0
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 2.1e-98 362.8 182 98.4
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 7.9e-90 334.3 245 71.4
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 1.6e-87 326.6 245 68.6
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 6.2e-87 324.7 245 69.4
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 3.1e-86 322.4 249 69.1
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 4.5e-85 318.5 248 68.5
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 5.8e-85 318.2 238 69.7
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 9.9e-85 317.4 241 67.2
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 9.9e-85 317.4 249 66.7
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 4.9e-84 315.1 239 69.5
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 4.9e-84 315.1 183 84.2
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 1.9e-83 313.2 248 69.4
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 2.1e-82 309.7 183 83.1
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 2.7e-82 309.3 243 65.8
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 1.3e-81 307.0 258 63.6
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 1.3e-81 307.0 241 68.5
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 1.3e-81 307.0 243 65.0
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 3.0e-81 305.8 245 67.8
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 3.9e-81 305.4 240 66.7
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 6.7e-81 304.7 186 79.6
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 8.7e-81 304.3 241 68.0
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 1.5e-80 303.5 186 79.6
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 1.5e-80 303.5 240 67.5
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 1.5e-80 303.5 250 64.8
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 1.5e-80 303.5 250 64.8
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 1.9e-80 303.1 243 65.0
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 7.4e-80 301.2 248 64.9
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 9.6e-80 300.8 186 79.0
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 1.3e-79 300.4 276 60.9
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 1.3e-79 300.4 238 66.8
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 2.8e-79 299.3 201 77.1
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 3.7e-79 298.9 247 65.2
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 3.7e-79 298.9 247 65.2
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 8.1e-79 297.7 215 71.6
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 1.4e-78 297.0 262 61.5
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 1.4e-78 297.0 237 67.5
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 1.8e-78 296.6 233 67.4
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 2.4e-78 296.2 186 78.5
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 4.0e-78 295.4 239 65.3
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 6.9e-78 294.7 242 64.0
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.2e-77 293.9 248 64.5
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 1.2e-77 293.9 233 64.8
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 1.5e-77 293.5 183 77.6
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 2.6e-77 292.7 176 82.4
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 4.5e-77 292.0 187 77.0
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 4.5e-77 292.0 229 65.1
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 5.8e-77 291.6 242 64.9
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 7.6e-77 291.2 185 77.3
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 1.3e-76 290.4 178 77.5
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 2.9e-76 289.3 252 62.3
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 2.9e-76 289.3 252 62.3
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 4.9e-76 288.5 239 64.4
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 6.5e-76 288.1 186 78.0
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 6.5e-76 288.1 167 83.2
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 1.4e-75 287.0 176 79.5
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 1.4e-75 287.0 167 81.4
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 1.9e-75 286.6 246 63.4
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 7.1e-75 284.6 183 77.0
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 9.3e-75 284.3 168 79.8
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 9.3e-75 284.3 237 64.1
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 1.2e-74 283.9 240 63.3
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 1.6e-74 283.5 245 63.3
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 1.6e-74 283.5 165 81.8
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 2.1e-74 283.1 250 61.6
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 2.7e-74 282.7 237 63.7
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 2.7e-74 282.7 251 61.0
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 7.9e-74 281.2 242 59.9
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 1.3e-73 280.4 182 73.1
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 3.9e-73 278.9 240 62.1
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 6.7e-73 278.1 227 64.3
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 8.7e-73 277.7 238 63.4
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 8.7e-73 277.7 227 64.3
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 1.5e-72 276.9 162 82.1
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 1.5e-72 276.9 242 60.7
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 1.9e-72 276.6 233 63.5
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 1.9e-72 276.6 233 63.5
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 1.9e-72 276.6 233 63.5
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 1.9e-72 276.6 238 63.0
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 1.9e-72 276.6 185 70.8
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 3.3e-72 275.8 232 63.8
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 4.3e-72 275.4 239 62.3
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 4.3e-72 275.4 227 64.8
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 1.6e-71 273.5 165 80.0
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 6.9e-70 268.1 187 70.1
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 2.6e-69 266.2 179 73.2
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 1.1e-67 260.8 189 70.9
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 5.5e-67 258.5 160 79.4
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 4.6e-66 255.4 286 51.7
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 6.7e-65 251.5 194 68.0
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 3.3e-64 249.2 180 68.9
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 5.7e-64 248.4 225 57.8
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 3.8e-60 235.7 165 66.1
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 9.4e-59 231.1 184 62.5
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 2.1e-58 229.9 220 57.7
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 6.7e-57 224.9 216 57.4
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 5.7e-56 221.9 172 63.4
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 1.8e-54 216.9 197 61.4
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 2.2e-52 209.9 184 60.9
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 2.5e-51 206.5 131 74.8
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 7.2e-51 204.9 117 85.5
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 1.4e-49 200.7 212 54.7
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 5.1e-49 198.7 126 74.6
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 3.1e-46 189.5 116 78.4
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 2.6e-45 186.4 114 78.1
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 8.5e-44 181.4 114 78.1
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 1.5e-43 180.6 114 76.3
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 2.1e-42 176.8 184 50.0
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 6.7e-41 171.8 179 50.3
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 4.4e-40 169.1 109 74.3
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 2.2e-39 166.8 123 67.5
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 6.3e-39 165.2 111 76.6
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 2.4e-38 163.3 108 76.9
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 5.0e-20 102.4 189 33.3
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 2.5e-19 100.1 118 51.7
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.5e-16 90.9 58 75.9
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 3.2e-14 83.2 197 28.9
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 5.0e-12 75.9 207 26.6
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 2.8e-10 70.1 49 67.3
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 3.6e-10 69.7 204 25.5
AT3G44485 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 2.2e-07 60.5 60 56.7


User provided reference genes

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