Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 3.7e-235 817.8 399 100.0
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 9.1e-149 530.8 285 93.0
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 9.2e-109 397.9 306 66.0
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 6.2e-105 385.2 282 66.0
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 1.8e-104 383.6 276 67.4
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 2.3e-104 383.3 276 66.7
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 3.1e-104 382.9 273 67.0
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 7.1e-101 371.7 282 64.2
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 4.3e-98 362.5 276 64.5
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 1.6e-97 360.5 276 62.7
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 4.4e-95 352.4 286 60.8
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 5.8e-95 352.1 284 62.0
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 2.9e-94 349.7 276 61.6
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 7.1e-93 345.1 282 60.3
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 1.2e-92 344.4 284 59.5
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 2.7e-92 343.2 274 60.6
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 2.7e-92 343.2 273 61.9
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 4.6e-92 342.4 276 60.1
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 6.0e-92 342.0 276 58.3
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 7.8e-92 341.7 276 59.4
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 1.3e-91 340.9 272 58.1
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 1.3e-91 340.9 276 60.5
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 1.3e-91 340.9 282 58.9
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.7e-91 340.5 276 60.5
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 1.7e-91 340.5 284 59.2
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 5.1e-91 339.0 280 58.9
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 5.1e-91 339.0 274 59.9
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 6.6e-91 338.6 275 57.8
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 8.6e-91 338.2 282 59.9
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.1e-90 337.8 291 58.8
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 3.3e-90 336.3 278 60.4
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 7.3e-90 335.1 285 58.2
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 4.7e-89 332.4 275 59.6
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 1.4e-88 330.9 277 57.8
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 2.4e-88 330.1 275 56.7
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 2.4e-88 330.1 277 58.8
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 2.4e-88 330.1 274 59.9
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 4.0e-88 329.3 277 57.4
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 8.9e-88 328.2 278 58.3
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 1.2e-87 327.8 273 59.0
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 1.2e-87 327.8 276 58.0
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 9.3e-85 318.2 277 58.1
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 1.6e-84 317.4 276 58.0
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 1.6e-84 317.4 278 58.3
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 1.6e-84 317.4 273 57.1
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 2.3e-83 313.5 276 58.3
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 3.3e-82 309.7 270 58.5
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 7.3e-82 308.5 331 48.6
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 9.6e-82 308.1 277 56.7
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 6.4e-78 295.4 336 49.4
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 1.1e-77 294.7 209 65.6
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 3.2e-77 293.1 300 50.0
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 1.3e-75 287.7 285 54.4
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 1.7e-75 287.3 270 55.2
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 3.0e-75 286.6 289 53.6
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 5.1e-75 285.8 279 51.3
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 6.6e-75 285.4 282 53.9
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 1.3e-73 281.2 278 53.2
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 3.1e-72 276.6 276 51.1
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 1.2e-71 274.6 279 49.5
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 6.4e-70 268.9 330 45.2
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 8.4e-70 268.5 222 63.1
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 1.0e-67 261.5 191 65.4
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 1.3e-67 261.2 281 46.6
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 1.8e-67 260.8 330 46.7
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 3.0e-67 260.0 276 51.8
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 8.7e-67 258.5 284 49.3
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 8.7e-67 258.5 274 46.7
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 2.8e-65 253.4 274 48.2
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 3.7e-65 253.1 283 44.9
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 4.8e-65 252.7 251 53.4
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 4.8e-65 252.7 279 46.6
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 1.2e-63 248.1 278 43.9
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 2.0e-63 247.3 256 51.2
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 5.8e-63 245.7 278 43.5
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 7.6e-63 245.4 284 44.4
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 7.6e-63 245.4 184 63.6
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 1.0e-62 245.0 209 57.9
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 4.9e-62 242.7 278 43.5
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 2.1e-60 237.3 284 42.3
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 7.9e-60 235.3 286 42.3
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 1.0e-59 235.0 278 42.1
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 3.0e-59 233.4 225 55.1
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 8.7e-59 231.9 273 46.2
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 1.1e-58 231.5 169 65.7
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 2.5e-58 230.3 277 48.0
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 5.7e-58 229.2 282 44.3
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.3e-57 228.0 247 50.6
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 1.6e-57 227.6 296 41.2
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 2.8e-57 226.9 161 68.3
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 8.2e-57 225.3 307 39.4
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 2.0e-55 220.7 202 55.4
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 1.9e-53 214.2 280 39.6
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 7.2e-53 212.2 273 41.0
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 4.8e-49 199.5 320 41.2
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 8.2e-49 198.7 277 41.9
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 2.9e-46 190.3 297 35.4
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 6.5e-46 189.1 294 42.5
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 4.3e-42 176.4 142 55.6
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 3.6e-36 156.8 135 62.2
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 3.1e-32 143.7 269 34.6
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 5.5e-29 132.9 269 31.6
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 3.3e-26 123.6 109 55.0
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 1.9e-21 107.8 78 64.1
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-19 101.7 215 33.5
vmacro04177 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 7.5e-10 69.3 60 46.7
SEGI_11371 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 5.4e-08 63.2 53 52.8
MBI01_g14332_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 1.6e-07 61.6 87 42.5
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 2.0e-07 61.2 36 72.2
HanXRQChr14g0450961 Helianthus annuus HOM05D006389 ORTHO05D007863 5.0e-06 56.6 69 46.4
Peaxi162Scf00185g00310 Petunia axillaris HOM05D006389 ORTHO05D007863 6.6e-06 56.2 40 52.5


User provided reference genes

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