Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2342 Papaver somniferum HOM05D003498 ORTHO05D004191 2.4e-92 342.0 162 100.0
PSO541G3815 Papaver somniferum HOM05D003498 ORTHO05D004191 3.1e-31 139.0 150 52.7
PSO170G3520 Papaver somniferum HOM05D003498 ORTHO05D004191 4.1e-31 138.7 150 52.0
PSO210G3977 Papaver somniferum HOM05D003498 ORTHO05D004191 4.1e-31 138.7 150 52.0
PSO675G6488 Papaver somniferum HOM05D003498 ORTHO05D004191 1.6e-30 136.7 150 52.0
TAR622G0600 Trochodendron aralioides HOM05D003498 ORTHO05D004191 8.5e-29 131.0 141 51.1
ATR1120G052 Amborella trichopoda HOM05D003498 ORTHO05D004191 3.2e-28 129.0 146 48.6
TAR374G1609 Trochodendron aralioides HOM05D003498 ORTHO05D004191 7.2e-28 127.9 158 46.8
CANSAT56G0570 Cannabis sativa HOM05D003498 ORTHO05D004191 2.1e-27 126.3 139 49.6
GSVIVG01001834001 Vitis vinifera HOM05D003498 ORTHO05D004191 2.1e-27 126.3 139 48.9
Lsat_1_v5_gn_2_93800 Lactuca sativa HOM05D003498 ORTHO05D004191 2.7e-27 125.9 146 48.6
Actinidia18419 Actinidia chinensis HOM05D003498 ORTHO05D004191 6.1e-27 124.8 139 48.9
Aqoxy3G02772 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 6.1e-27 124.8 139 50.4
Lj7A607T30 Lonicera japonica HOM05D003498 ORTHO05D004191 6.1e-27 124.8 139 48.9
MD17G1016300 Malus domestica HOM05D003498 ORTHO05D004191 6.1e-27 124.8 139 49.6
Lsat_1_v5_gn_2_32401 Lactuca sativa HOM05D003498 ORTHO05D004191 8.0e-27 124.4 146 48.6
Prupe.3G301400 Prunus persica HOM05D003498 ORTHO05D004191 1.0e-26 124.0 139 49.6
Ca_01840_v3 Cicer arietinum L. HOM05D003498 ORTHO05D004191 2.3e-26 122.9 144 48.6
Hund09045 Selenicereus undatus HOM05D003498 ORTHO05D004191 2.3e-26 122.9 139 46.8
Aqoxy51s003 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 3.0e-26 122.5 139 49.6
Aqoxy7G03334 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 3.0e-26 122.5 139 49.6
Hma1.2p1_0279F.1_g112380 Hydrangea macrophylla HOM05D003498 ORTHO05D004191 3.0e-26 122.5 144 48.6
MD09G1015900 Malus domestica HOM05D003498 ORTHO05D004191 4.0e-26 122.1 139 48.9
Prupe.3G071800 Prunus persica HOM05D003498 ORTHO05D004191 4.0e-26 122.1 139 48.9
arahy.Tifrunner.gnm1.ann1.C6G3CE Arachis hypogaea HOM05D003498 ORTHO05D004191 5.2e-26 121.7 143 49.0
Gohir.A11G167100 Gossypium hirsutum HOM05D003498 ORTHO05D004191 5.2e-26 121.7 139 47.5
Gorai.007G185700 Gossypium raimondii HOM05D003498 ORTHO05D004191 5.2e-26 121.7 139 47.5
Rhsim08G0045600 Rhododendron simsii HOM05D003498 ORTHO05D004191 5.2e-26 121.7 146 46.6
Gohir.D11G173400 Gossypium hirsutum HOM05D003498 ORTHO05D004191 6.7e-26 121.3 139 47.5
CSS0027983 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 8.8e-26 120.9 143 46.2
arahy.Tifrunner.gnm1.ann1.82NANE Arachis hypogaea HOM05D003498 ORTHO05D004191 1.1e-25 120.6 143 48.3
CSS0031931 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.5e-25 120.2 146 45.9
MBI11_g00914_MAGBIO Magnolia biondii HOM05D003498 ORTHO05D004191 1.5e-25 120.2 146 45.9
Psat5g244520 Pisum sativum HOM05D003498 ORTHO05D004191 1.5e-25 120.2 144 47.9
TPR.G38988 Trifolium pratense HOM05D003498 ORTHO05D004191 1.5e-25 120.2 144 47.9
vmacro05933 Vaccinium macrocarpon HOM05D003498 ORTHO05D004191 1.5e-25 120.2 138 48.6
Dinv33373 Davidia involucrata HOM05D003498 ORTHO05D004191 2.0e-25 119.8 139 48.2
MSTRG.15556 Avicennia marina HOM05D003498 ORTHO05D004191 2.6e-25 119.4 139 48.2
FAN05G5642 Fragaria x ananassa HOM05D003498 ORTHO05D004191 2.6e-25 119.4 139 48.2
FAN09G1233 Fragaria x ananassa HOM05D003498 ORTHO05D004191 2.6e-25 119.4 139 48.2
FAN14G2218 Fragaria x ananassa HOM05D003498 ORTHO05D004191 2.6e-25 119.4 139 48.2
Medtr1g092440 Medicago truncatula HOM05D000397 ORTHO05D004191 2.6e-25 119.4 148 45.9
Actinidia38210 Actinidia chinensis HOM05D003498 ORTHO05D004191 3.3e-25 119.0 139 47.5
FvH4_6g52930 Fragaria vesca HOM05D003498 ORTHO05D004191 3.3e-25 119.0 139 47.5
FAN02G3013 Fragaria x ananassa HOM05D003498 ORTHO05D004191 4.4e-25 118.6 139 47.5
PGR083G1382 Punica granatum HOM05D003498 ORTHO05D004191 4.4e-25 118.6 139 46.8
Rhsim10G0009900 Rhododendron simsii HOM05D003498 ORTHO05D004191 4.4e-25 118.6 138 47.1
Atru.chr10.1225 Acer truncatum HOM05D003498 ORTHO05D004191 5.7e-25 118.2 144 45.1
Nitab4.5_0002877g0040 Nicotiana tabacum HOM05D003498 ORTHO05D004191 5.7e-25 118.2 139 49.6
Phvul.005G072200 Phaseolus vulgaris HOM05D003498 ORTHO05D004191 5.7e-25 118.2 144 46.5
CSS0032491 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 7.5e-25 117.9 138 48.6
Medtr0274s0020 Medicago truncatula HOM05D003498 ORTHO05D004191 7.5e-25 117.9 144 45.1
Zm00001eb248420 Zea mays HOM05D003498 ORTHO05D004191 9.7e-25 117.5 146 45.9
Duzib133G0132 Durio zibethinus HOM05D003498 ORTHO05D004191 1.3e-24 117.1 139 46.0
Duzib138G0533 Durio zibethinus HOM05D003498 ORTHO05D004191 1.3e-24 117.1 144 45.1
ECA238G3044 Erigeron canadensis HOM05D003498 ORTHO05D004191 1.3e-24 117.1 146 45.9
VMungo1080G1345 Vigna mungo HOM05D003498 ORTHO05D004191 1.3e-24 117.1 139 47.5
Zm00001eb208950 Zea mays HOM05D003498 ORTHO05D004191 1.3e-24 117.1 146 45.2
Manes.14G169300 Manihot esculenta HOM05D003498 ORTHO05D004191 1.7e-24 116.7 158 43.7
Zm00001eb109870 Zea mays HOM05D003498 ORTHO05D004191 1.7e-24 116.7 139 46.8
Medtr0271s0030 Medicago truncatula HOM05D003498 ORTHO05D004191 2.2e-24 116.3 139 46.0
QL02p026417 Quercus lobata HOM05D003498 ORTHO05D004191 2.2e-24 116.3 144 45.1
Sed0009078 Sechium edule HOM05D003498 ORTHO05D004191 2.2e-24 116.3 144 45.8
Actinidia05930 Actinidia chinensis HOM05D003498 ORTHO05D004191 2.8e-24 115.9 138 47.8
DCAR_027394 Daucus carota HOM05D003498 ORTHO05D004191 3.7e-24 115.5 139 47.5
Nitab4.5_0005699g0040 Nicotiana tabacum HOM05D003498 ORTHO05D004191 3.7e-24 115.5 139 48.9
Nitab4.5_0011275g0010 Nicotiana tabacum HOM05D003498 ORTHO05D004191 3.7e-24 115.5 139 48.2
Sc07g0003610 Simmondsia chinensis HOM05D003498 ORTHO05D004191 3.7e-24 115.5 146 43.8
TWI36G0082 Tripterygium wilfordii HOM05D003498 ORTHO05D004191 3.7e-24 115.5 144 45.8
Ciclev10016330m.g Citrus clementina HOM05D003498 ORTHO05D004191 4.8e-24 115.2 144 45.1
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 4.8e-24 115.2 151 43.7
Manes.14G170700 Manihot esculenta HOM05D003498 ORTHO05D004191 4.8e-24 115.2 139 45.3
HanXRQChr14g0450941 Helianthus annuus HOM05D003498 ORTHO05D004191 6.3e-24 114.8 144 45.1
SGA_v2.0_scaffold47G17560 Striga asiatica HOM05D003498 ORTHO05D004191 6.3e-24 114.8 139 47.5
arahy.Tifrunner.gnm1.ann1.IHQ30F Arachis hypogaea HOM05D003498 ORTHO05D004191 8.2e-24 114.4 144 45.1
Potri.001G334900 Populus trichocarpa HOM05D003498 ORTHO05D004191 8.2e-24 114.4 144 45.1
Thecc.04G123800 Theobroma cacao HOM05D003498 ORTHO05D004191 8.2e-24 114.4 144 44.4
Lj5g0005525 Lotus japonicus HOM05D003498 ORTHO05D004191 1.1e-23 114.0 144 45.8
Nitab4.5_0000441g0220 Nicotiana tabacum HOM05D003498 ORTHO05D004191 1.1e-23 114.0 139 48.2
Gorai.001G085600 Gossypium raimondii HOM05D003498 ORTHO05D004191 1.4e-23 113.6 144 43.8
Os07g0639900 Oryza sativa ssp. japonica HOM05D003498 ORTHO05D004191 1.4e-23 113.6 139 45.3
PGR083G2492 Punica granatum HOM05D003498 ORTHO05D004191 1.4e-23 113.6 139 46.8
Cpa.g.sc802.1 Carica papaya HOM05D003498 ORTHO05D004191 1.8e-23 113.2 144 44.4
RcHm_v2.0_Chr2g0174641 Rosa chinensis HOM05D003498 ORTHO05D004191 1.8e-23 113.2 139 46.8
Peaxi162Scf00147g01820 Petunia axillaris HOM05D003498 ORTHO05D004191 2.4e-23 112.8 139 47.5
Cc07_g00530 Coffea canephora HOM05D003498 ORTHO05D004191 3.1e-23 112.5 139 46.8
Lj1g0028146 Lotus japonicus HOM05D003498 ORTHO05D004191 3.1e-23 112.5 144 45.1
Peaxi162Scf00776g00325 Petunia axillaris HOM05D003498 ORTHO05D004191 3.1e-23 112.5 139 48.2
Ah.01g001720 Amaranthus hybridus HOM05D003498 ORTHO05D004191 7.0e-23 111.3 149 43.0
EL10Ac9g22898 Beta vulgaris HOM05D003498 ORTHO05D004191 7.0e-23 111.3 139 43.9
Migut.K01441 Erythranthe guttata HOM05D003498 ORTHO05D004191 7.0e-23 111.3 139 44.6
Lalb_Chr10g0095001 Lupinus albus HOM05D003498 ORTHO05D004191 9.1e-23 110.9 144 43.8
Sabra16G0216000 Salix brachista HOM05D003498 ORTHO05D004191 9.1e-23 110.9 144 43.8
PGSC0003DMG400006157 Solanum tuberosum HOM05D003498 ORTHO05D004191 9.1e-23 110.9 139 47.5
Eucgr.A01374 Eucalyptus grandis HOM05D003498 ORTHO05D004191 1.2e-22 110.5 139 44.6
Solyc07g048010.4 Solanum lycopersicum HOM05D003498 ORTHO05D004191 1.6e-22 110.2 139 47.5
Sopen07g024440 Solanum pennellii HOM05D003498 ORTHO05D004191 1.6e-22 110.2 139 47.5
AUR62012870 Chenopodium quinoa HOM05D003498 ORTHO05D004191 2.7e-22 109.4 158 40.5
Glyma.13G277200 Glycine max HOM05D003498 ORTHO05D004191 2.7e-22 109.4 143 44.8
SGA_v2.0_scaffold68G22828 Striga asiatica HOM05D003498 ORTHO05D004191 2.7e-22 109.4 139 45.3
Cc06_g23000 Coffea canephora HOM05D003498 ORTHO05D004191 3.5e-22 109.0 139 46.0
Oeu001405.1 Olea europaea HOM05D003498 ORTHO05D004191 3.5e-22 109.0 138 45.7
HPP92_003500 Vanilla planifolia HOM05D003498 ORTHO05D004191 4.5e-22 108.6 139 43.2
HPP92_026896 Vanilla planifolia HOM05D003498 ORTHO05D004191 4.5e-22 108.6 139 43.2
CiPaw.08G003000 Carya illinoinensis HOM05D003498 ORTHO05D004191 7.7e-22 107.8 144 43.1
AUR62017642 Chenopodium quinoa HOM05D003498 ORTHO05D004191 7.7e-22 107.8 158 39.9
Oeu001847.2 Olea europaea HOM05D003498 ORTHO05D004191 7.7e-22 107.8 139 44.6
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 7.7e-22 107.8 144 43.1
Cfa012954 Carpinus fangiana HOM05D002694 ORTHO05D002927 1.0e-21 107.5 144 43.1
AUR62043688 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.3e-21 107.1 158 39.9
CAN.G1461.1 Capsicum annuum HOM05D003498 ORTHO05D004191 2.2e-21 106.3 139 46.0
CDE09G0325 Ceratophyllum demersum HOM05D003498 ORTHO05D004191 2.2e-21 106.3 139 43.2
THA.LOC104810770 Tarenaya hassleriana HOM05D003498 ORTHO05D004191 2.2e-21 106.3 139 43.2
unitig_748.g7053 Utricularia gibba HOM05D003498 ORTHO05D004191 2.9e-21 105.9 139 44.6
AT5G59440 Arabidopsis thaliana HOM05D003498 ORTHO05D004191 3.8e-21 105.5 139 43.9
arahy.Tifrunner.gnm1.ann1.MGT28Z Arachis hypogaea HOM05D003498 ORTHO05D004191 3.8e-21 105.5 157 42.0
CSS0006967 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.1e-20 104.0 139 44.6
BraA10t43747Z Brassica rapa HOM05D003498 ORTHO05D004191 1.5e-20 103.6 139 42.4
SEGI_21909 Sequoiadendron giganteum HOM05D003498 ORTHO05D004191 1.5e-20 103.6 139 42.4
AL8G35910 Arabidopsis lyrata HOM05D003498 ORTHO05D004191 1.9e-20 103.2 139 42.4
Zm00001eb311360 Zea mays HOM05D003498 ORTHO05D004191 1.9e-20 103.2 136 44.1
C09p51820 Brassica napus HOM05D000758 ORTHO05D001216 2.5e-20 102.8 139 41.7
A10p16650 Brassica napus HOM05D000758 ORTHO05D004191 3.2e-20 102.4 139 41.7
CARHR285810 Cardamine hirsuta HOM05D003498 ORTHO05D004191 3.2e-20 102.4 139 42.4
BcaC04g19772 Brassica carinata HOM05D003498 ORTHO05D004191 4.2e-20 102.1 139 41.7
BolC9t58046H Brassica oleracea HOM05D000758 ORTHO05D004191 4.2e-20 102.1 139 41.7
AUR62012113 Chenopodium quinoa HOM05D003498 ORTHO05D004191 4.2e-20 102.1 158 39.2
BcaB08g36258 Brassica carinata HOM05D003498 ORTHO05D004191 5.5e-20 101.7 139 42.4
ClCG07G012360 Citrullus lanatus HOM05D003498 ORTHO05D004191 7.2e-20 101.3 139 41.7
Manes.06G007550 Manihot esculenta HOM05D003498 ORTHO05D004191 7.2e-20 101.3 139 41.7
Sp6g21120 Schrenkiella parvula HOM05D003498 ORTHO05D004191 9.4e-20 100.9 139 41.0
Carub.0008s2011 Capsella rubella HOM05D003498 ORTHO05D004191 1.2e-19 100.5 138 42.0
Thhalv10014606m.g Eutrema salsugineum HOM05D003498 ORTHO05D004191 1.6e-19 100.1 139 41.0
Aa31LG1G11800 Aethionema arabicum HOM05D003498 ORTHO05D004191 2.1e-19 99.8 139 40.3
CSS0025632 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 2.7e-19 99.4 138 42.0
MELO3C017855.2 Cucumis melo HOM05D003498 ORTHO05D004191 2.0e-17 93.2 139 38.8
TPR.G16146 Trifolium pratense HOM05D003498 ORTHO05D004191 2.0e-17 93.2 139 41.7
SMO201G0123 Selaginella moellendorffii HOM05D003498 ORTHO05D004191 5.7e-17 91.7 139 39.6
vmacro18322 Vaccinium macrocarpon HOM05D003498 ORTHO05D004191 9.8e-17 90.9 126 41.3
Mapoly0001s0438 Marchantia polymorpha HOM05D003498 ORTHO05D004191 1.3e-16 90.5 139 37.4
Nn3g16542 Nelumbo nucifera HOM05D003498 ORTHO05D004191 3.7e-16 89.0 139 39.6
CSS0002226 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 6.3e-16 88.2 55 76.4
CsaV3_4G001780 Cucumis sativus L. HOM05D003498 ORTHO05D004191 6.3e-16 88.2 145 37.2
CSS0030890 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.8e-15 86.7 146 37.7
AagrBONN_evm.TU.Sc2ySwM_228.2546 Anthoceros agrestis HOM05D003498 ORTHO05D004191 3.1e-15 85.9 137 35.0
CBR_g30299 Chara braunii HOM05D003498 ORTHO05D004191 7.0e-15 84.7 140 37.9
AUR62033715 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.6e-14 83.6 55 67.3
CBR_g50851 Chara braunii HOM05D003498 ORTHO05D004191 2.7e-14 82.8 142 38.0
Gohir.A07G076000 Gossypium hirsutum HOM05D003498 ORTHO05D004191 7.7e-14 81.3 56 64.3
Gohir.D07G080500 Gossypium hirsutum HOM05D003498 ORTHO05D004191 7.7e-14 81.3 56 66.1
Atru.chr6.2501 Acer truncatum HOM05D003498 ORTHO05D004191 1.3e-13 80.5 55 67.3
AUR62003275 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.3e-13 80.5 55 67.3
AUR62042988 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.3e-13 80.5 55 67.3
Haze_21315 Corylus avellana HOM05D003498 ORTHO05D004191 3.8e-13 79.0 55 69.1
TPR.G22201 Trifolium pratense HOM05D003498 ORTHO05D004191 3.8e-13 79.0 138 35.5
Lalb_Chr01g0016871 Lupinus albus HOM05D003498 ORTHO05D004191 4.2e-12 75.5 56 64.3
Atru.chr9.861 Acer truncatum HOM05D003498 ORTHO05D037953 5.5e-12 75.1 59 59.3
CiPaw.07G235500 Carya illinoinensis HOM05D003498 ORTHO05D004191 5.5e-12 75.1 144 36.1
MCO11G310 Micromonas commoda HOM05D003498 ORTHO05D004191 1.2e-11 73.9 142 33.1
Pp3c13_20320 Physcomitrium patens HOM05D003498 ORTHO05D004191 2.1e-11 73.2 56 58.9
PRCOL_00002439 Prasinoderma coloniale HOM05D003498 ORTHO05D004191 2.7e-11 72.8 150 30.0
SMO327G0007 Selaginella moellendorffii HOM05D003498 ORTHO05D379411 3.6e-11 72.4 58 58.6
BcaC05g26822 Brassica carinata HOM05D003498 ORTHO05D004191 1.4e-10 70.5 58 63.8
Haze_25285 Corylus avellana HOM05D003498 ORTHO05D004191 8.8e-10 67.8 76 50.0
Dinv27202 Davidia involucrata HOM05D003498 ORTHO05D004191 1.2e-09 67.4 104 39.4
Hma1.2p1_1219F.1_g267800 Hydrangea macrophylla HOM05D003498 ORTHO05D004191 4.9e-08 62.0 39 66.7
Cre03.g190750 Chlamydomonas reinhardtii HOM05D003498 ORTHO05D004191 6.3e-08 61.6 136 30.9
QL93p1517_0005 Quercus lobata HOM05D003498 ORTHO05D004191 6.3e-08 61.6 41 65.9
SMO203G0202 Selaginella moellendorffii HOM05D003498 ORTHO05D006193 1.1e-07 60.8 46 65.2
TPR.G23191 Trifolium pratense HOM05D003498 ORTHO05D005148 1.1e-07 60.8 123 35.0
Haze_27494 Corylus avellana HOM05D003498 ORTHO05D004191 1.4e-07 60.5 135 31.9
Ciclev10026903m.g Citrus clementina HOM05D003498 ORTHO05D037953 1.8e-07 60.1 54 55.6
TPR.G5710 Trifolium pratense HOM05D003498 ORTHO05D004191 1.8e-07 60.1 35 71.4
HanXRQChr14g0428161 Helianthus annuus HOM05D003498 ORTHO05D004191 4.1e-07 58.9 35 77.1
AUR62040722 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.5e-06 55.8 124 30.6


User provided reference genes

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