Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G1580 Papaver somniferum HOM05D006328 ORTHO05D007721 4.4e-141 504.6 249 100.0
PSO339G5084 Papaver somniferum HOM05D006328 ORTHO05D007721 2.9e-137 491.9 249 97.6
Nn7g35935 Nelumbo nucifera HOM05D006328 ORTHO05D007721 2.3e-86 322.8 253 67.2
TAR633G0950 Trochodendron aralioides HOM05D006328 ORTHO05D007721 1.9e-80 303.1 256 62.1
TAR633G1956 Trochodendron aralioides HOM05D006328 ORTHO05D007721 7.3e-80 301.2 256 61.7
HPP92_009650 Vanilla planifolia HOM05D006328 ORTHO05D007721 2.4e-78 296.2 197 73.1
ATR0598G038 Amborella trichopoda HOM05D006328 ORTHO05D007721 5.2e-78 295.0 189 75.1
CiPaw.13G173100 Carya illinoinensis HOM05D006328 ORTHO05D007721 6.8e-78 294.7 261 60.9
MBI13_g29633_MAGBIO Magnolia biondii HOM05D006328 ORTHO05D007721 8.9e-78 294.3 205 72.2
GSVIVG01025405001 Vitis vinifera HOM05D006328 ORTHO05D007721 9.9e-77 290.8 196 73.5
AL5G20530 Arabidopsis lyrata HOM05D006328 ORTHO05D007721 1.3e-76 290.4 251 60.6
Gohir.D13G217500 Gossypium hirsutum HOM05D006328 ORTHO05D007721 2.9e-76 289.3 255 61.6
Dinv13426 Davidia involucrata HOM05D006328 ORTHO05D007721 3.8e-76 288.9 227 65.6
Gorai.013G248000 Gossypium raimondii HOM05D006328 ORTHO05D007721 3.8e-76 288.9 255 61.6
Lsat_1_v5_gn_2_101560 Lactuca sativa HOM05D006328 ORTHO05D007721 3.8e-76 288.9 224 65.6
Thecc.09G213100 Theobroma cacao HOM05D006328 ORTHO05D007721 3.8e-76 288.9 258 61.6
Aqoxy1G00065 Aquilegia oxysepala HOM05D006328 ORTHO05D007721 1.4e-75 287.0 249 61.4
Eucgr.B03625 Eucalyptus grandis HOM05D006328 ORTHO05D007721 1.4e-75 287.0 185 75.1
PGSC0003DMG400032183 Solanum tuberosum HOM05D006328 ORTHO05D007721 1.4e-75 287.0 223 67.3
THA.LOC104811061 Tarenaya hassleriana HOM05D006328 ORTHO05D007721 1.4e-75 287.0 203 69.0
EL10Ac4g10350 Beta vulgaris HOM05D006328 ORTHO05D007721 2.4e-75 286.2 188 74.5
CARHR153570 Cardamine hirsuta HOM05D006328 ORTHO05D007721 2.4e-75 286.2 203 69.0
Actinidia16265 Actinidia chinensis HOM05D006328 ORTHO05D007721 4.1e-75 285.4 209 68.4
Cpa.g.sc119.81 Carica papaya HOM05D006328 ORTHO05D007721 4.1e-75 285.4 266 58.3
Nitab4.5_0000775g0140 Nicotiana tabacum HOM05D006328 ORTHO05D007721 4.1e-75 285.4 219 66.2
CAN.G158.4 Capsicum annuum HOM05D006328 ORTHO05D007721 7.1e-75 284.6 230 66.1
Cc01_g01550 Coffea canephora HOM05D006328 ORTHO05D007721 9.2e-75 284.3 254 60.6
COL.COLO4_34990 Corchorus olitorius HOM05D001240 ORTHO05D002450 1.2e-74 283.9 225 65.3
Gohir.A13G213700 Gossypium hirsutum HOM05D006328 ORTHO05D007721 1.2e-74 283.9 255 61.2
Manes.03G088400 Manihot esculenta HOM05D006328 ORTHO05D007721 1.2e-74 283.9 256 60.5
Sopen01g002030 Solanum pennellii HOM05D006328 ORTHO05D007721 1.2e-74 283.9 223 66.8
Aa31LG4G12590 Aethionema arabicum HOM05D006328 ORTHO05D007721 1.6e-74 283.5 193 71.0
C07p38710 Brassica napus HOM05D006328 ORTHO05D007721 2.1e-74 283.1 225 63.1
Ciclev10016391m.g Citrus clementina HOM05D006328 ORTHO05D007721 2.1e-74 283.1 244 60.7
Nitab4.5_0011368g0030 Nicotiana tabacum HOM05D006328 ORTHO05D007721 2.1e-74 283.1 219 66.2
Solyc01g006020.4 Solanum lycopersicum HOM05D006328 ORTHO05D007721 2.1e-74 283.1 223 66.4
QL01p007982 Quercus lobata HOM05D006328 ORTHO05D007721 2.7e-74 282.7 260 60.0
ECA238G4721 Erigeron canadensis HOM05D006328 ORTHO05D007721 3.5e-74 282.3 204 67.6
PGR102G1639 Punica granatum HOM05D006328 ORTHO05D007721 3.5e-74 282.3 257 59.5
AT3G32930 Arabidopsis thaliana HOM05D006328 ORTHO05D007721 4.6e-74 282.0 251 59.4
Oeu029372.1 Olea europaea HOM05D006328 ORTHO05D007721 4.6e-74 282.0 197 68.5
A06p39560 Brassica napus HOM05D006328 ORTHO05D007721 6.0e-74 281.6 225 62.2
BraA06t26871Z Brassica rapa HOM05D006328 ORTHO05D007721 6.0e-74 281.6 225 62.2
Carub.0003s3500 Capsella rubella HOM05D006328 ORTHO05D007721 6.0e-74 281.6 214 65.9
Peaxi162Scf00100g00716 Petunia axillaris HOM05D006328 ORTHO05D007721 1.0e-73 280.8 220 65.9
Potri.003G216700 Populus trichocarpa HOM05D006328 ORTHO05D007721 2.3e-73 279.6 260 58.5
CANSAT11G2432 Cannabis sativa HOM05D006328 ORTHO05D007721 3.0e-73 279.3 253 58.9
MD08G1205200 Malus domestica HOM05D006328 ORTHO05D007721 3.0e-73 279.3 261 59.8
CDE06G2606 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 5.1e-73 278.5 184 71.2
HanXRQChr07g0196761 Helianthus annuus HOM05D006328 ORTHO05D007721 5.1e-73 278.5 225 64.0
BcaB04g19533 Brassica carinata HOM05D006328 ORTHO05D007721 6.6e-73 278.1 226 61.5
Hma1.2p1_0062F.1_g034170 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 6.6e-73 278.1 183 71.6
Sp2g18300 Schrenkiella parvula HOM05D006328 ORTHO05D007721 6.6e-73 278.1 200 68.0
unitig_746.g26630 Utricularia gibba HOM05D006328 ORTHO05D007721 8.7e-73 277.7 239 62.8
MSTRG.18860 Avicennia marina HOM05D006328 ORTHO05D007721 1.1e-72 277.3 250 58.4
Lj1A460T3 Lonicera japonica HOM05D006328 ORTHO05D007721 1.1e-72 277.3 245 60.8
Glyma.08G315600 Glycine max HOM05D006328 ORTHO05D007721 1.5e-72 276.9 239 61.5
CSS0031266 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 2.5e-72 276.2 204 67.2
Atru.chr3.2259 Acer truncatum HOM05D006328 ORTHO05D007721 3.3e-72 275.8 192 71.4
Atru.chr3.2265 Acer truncatum HOM05D006328 ORTHO05D007721 3.3e-72 275.8 192 71.4
Lalb_Chr10g0091951 Lupinus albus HOM05D006328 ORTHO05D007721 4.3e-72 275.4 226 64.6
Sabra03G0161800 Salix brachista HOM05D006328 ORTHO05D007721 4.3e-72 275.4 279 55.9
ClCG08G005770 Citrullus lanatus HOM05D006328 ORTHO05D007721 5.6e-72 275.0 191 71.7
FvH4_3g44830 Fragaria vesca HOM05D006328 ORTHO05D007721 5.6e-72 275.0 192 71.4
Phvul.006G042800 Phaseolus vulgaris HOM05D006328 ORTHO05D007721 5.6e-72 275.0 238 60.9
MELO3C015648.2 Cucumis melo HOM05D006328 ORTHO05D007721 7.3e-72 274.6 191 71.2
Duzib150G1371 Durio zibethinus HOM05D006328 ORTHO05D007721 7.3e-72 274.6 252 59.9
FAN11G1794 Fragaria x ananassa HOM05D006328 ORTHO05D007721 7.3e-72 274.6 262 58.0
RcHm_v2.0_Chr5g0081531 Rosa chinensis HOM05D006328 ORTHO05D007721 7.3e-72 274.6 192 70.8
SalBow6G6014 Salvia bowleyana HOM05D006328 ORTHO05D007721 7.3e-72 274.6 202 68.8
AUR62019196 Chenopodium quinoa HOM05D006328 ORTHO05D007721 9.6e-72 274.2 190 72.6
ClCG03G013990 Citrullus lanatus HOM05D006328 ORTHO05D007721 9.6e-72 274.2 191 71.2
Haze_22985 Corylus avellana HOM05D006328 ORTHO05D007721 9.6e-72 274.2 309 53.4
Thhalv10004835m.g Eutrema salsugineum HOM05D006328 ORTHO05D007721 9.6e-72 274.2 200 68.5
Sed0015335 Sechium edule HOM05D006328 ORTHO05D007721 9.6e-72 274.2 260 57.7
BcaC04g23807 Brassica carinata HOM05D006328 ORTHO05D007721 1.6e-71 273.5 225 61.8
C09p04470 Brassica napus HOM05D006328 ORTHO05D007721 1.6e-71 273.5 225 61.8
BolC9t53377H Brassica oleracea HOM05D006328 ORTHO05D007721 1.6e-71 273.5 225 61.8
TWI60G0846 Tripterygium wilfordii HOM05D006328 ORTHO05D007721 1.6e-71 273.5 187 70.6
Hund07572 Selenicereus undatus HOM05D006328 ORTHO05D007721 2.1e-71 273.1 256 59.0
BraA09t36060Z Brassica rapa HOM05D006328 ORTHO05D007721 2.8e-71 272.7 228 61.0
CsaV3_1G042230 Cucumis sativus L. HOM05D006328 ORTHO05D007721 2.8e-71 272.7 191 70.7
FAN16G1952 Fragaria x ananassa HOM05D006328 ORTHO05D007721 2.8e-71 272.7 194 70.1
A09p04230 Brassica napus HOM05D006328 ORTHO05D007721 3.6e-71 272.3 227 61.2
SGA_v2.0_scaffold6G03437 Striga asiatica HOM05D006328 ORTHO05D007721 4.7e-71 271.9 205 67.8
Lj6g0000665 Lotus japonicus HOM05D006328 ORTHO05D007721 1.1e-70 270.8 201 67.2
Prupe.1G537200 Prunus persica HOM05D006328 ORTHO05D007721 1.1e-70 270.8 202 68.3
Migut.D02532 Erythranthe guttata HOM05D006328 ORTHO05D007721 2.4e-70 269.6 182 72.0
arahy.Tifrunner.gnm1.ann1.6HD85A Arachis hypogaea HOM05D006328 ORTHO05D007721 3.1e-70 269.2 253 58.5
FAN25G2838 Fragaria x ananassa HOM05D006328 ORTHO05D007721 3.1e-70 269.2 212 65.6
FAN21G0799 Fragaria x ananassa HOM05D006328 ORTHO05D007721 9.0e-70 267.7 275 56.0
Glyma.18G097300 Glycine max HOM05D006328 ORTHO05D007721 1.2e-69 267.3 241 59.3
TPR.G19330 Trifolium pratense HOM05D006328 ORTHO05D007721 1.2e-69 267.3 232 60.3
Actinidia06854 Actinidia chinensis HOM05D001240 ORTHO05D002450 7.6e-69 264.6 195 68.2
Medtr3g083310 Medicago truncatula HOM05D006328 ORTHO05D007721 4.9e-68 261.9 197 66.0
DCAR_001992 Daucus carota HOM05D006328 ORTHO05D007721 1.4e-67 260.4 212 63.7
Ah.06g193050 Amaranthus hybridus HOM05D001193 ORTHO05D007721 1.2e-66 257.3 251 55.8
Rhsim13G0229700 Rhododendron simsii HOM05D006328 ORTHO05D007721 2.1e-66 256.5 228 58.8
AUR62000025 Chenopodium quinoa HOM05D006328 ORTHO05D007721 3.5e-66 255.8 175 73.7
Os07g0608100 Oryza sativa ssp. japonica HOM05D006328 ORTHO05D007721 7.8e-66 254.6 189 68.3
Manes.15G105600 Manihot esculenta HOM05D006328 ORTHO05D007721 3.0e-65 252.7 252 57.1
Zm00001eb108920 Zea mays HOM05D006328 ORTHO05D007721 7.3e-64 248.1 190 65.8
vmacro04215 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 3.0e-57 226.1 180 63.3
Hma1.2p1_0062F.1_g034180 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 5.6e-56 221.9 141 75.2
VMungo0540G0449 Vigna mungo HOM05D006328 ORTHO05D007721 1.5e-53 213.8 122 82.8
Mapoly0048s0070 Marchantia polymorpha HOM05D006328 ORTHO05D007721 8.7e-49 198.0 196 54.1
Psat5g101200 Pisum sativum HOM05D006328 ORTHO05D007721 1.3e-47 194.1 146 66.4
AagrBONN_evm.TU.Sc2ySwM_344.1649 Anthoceros agrestis HOM05D006328 ORTHO05D007721 3.4e-45 186.0 186 53.8
Pp3c11_23310 Physcomitrium patens HOM05D006328 ORTHO05D007721 2.1e-42 176.8 182 51.1
vmacro22566 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 2.8e-39 166.4 105 77.1
Sc06g0004300 Simmondsia chinensis HOM05D006328 ORTHO05D007721 4.8e-39 165.6 141 61.7
CBR_g50072 Chara braunii HOM05D006328 ORTHO05D007721 1.3e-36 157.5 152 53.9
CDE07G1106 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 2.9e-36 156.4 185 47.0
CSS0049555 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 1.2e-29 134.4 105 65.7
CSS0028438 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 3.8e-28 129.4 104 64.4
Nn2g15765 Nelumbo nucifera HOM05D006328 ORTHO05D007721 3.8e-28 129.4 72 83.3
Duzib168G1709 Durio zibethinus HOM05D006328 ORTHO05D007721 7.2e-27 125.2 200 40.5
HanXRQChr04g0113321 Helianthus annuus HOM05D006328 ORTHO05D007721 1.1e-22 111.3 61 82.0
Nn2g15764 Nelumbo nucifera HOM05D006328 ORTHO05D007721 3.2e-19 99.8 81 67.9
HanXRQChr17g0560491 Helianthus annuus HOM05D006328 ORTHO05D007721 9.7e-16 88.2 60 71.7
unitig_899.g15354 Utricularia gibba HOM05D006328 ORTHO05D007721 4.8e-15 85.9 77 54.5
Dinv15017 Davidia involucrata HOM05D006328 ORTHO05D007721 1.0e-12 78.2 129 38.0
arahy.Tifrunner.gnm1.ann1.VB18ZC Arachis hypogaea HOM05D006328 ORTHO05D007721 1.1e-11 74.7 129 38.8
VMungo0540G1370 Vigna mungo HOM05D006328 ORTHO05D007721 1.6e-10 70.9 132 33.3
Sabra06G0010000 Salix brachista HOM05D006328 ORTHO05D007721 2.3e-09 67.0 105 41.9
Zm00001eb327220 Zea mays HOM05D006328 ORTHO05D007721 1.5e-08 64.3 65 50.8
arahy.Tifrunner.gnm1.ann1.C5G03I Arachis hypogaea HOM05D006328 ORTHO05D007721 5.7e-08 62.4 83 44.6
Hma1.2p1_0062F.1_g034160 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 1.3e-07 61.2 111 37.8


User provided reference genes

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