Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 7.4e-302 1040.0 640 100.0
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 2.3e-239 832.4 573 90.4
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 6.6e-125 452.2 359 63.0
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 1.9e-124 450.7 354 64.1
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 2.5e-124 450.3 345 64.3
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 8.9e-122 441.8 338 63.3
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 8.9e-122 441.8 354 60.7
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 2.9e-120 436.8 331 64.4
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 3.7e-120 436.4 333 61.6
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 2.4e-119 433.7 361 59.6
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 5.4e-119 432.6 361 58.2
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 9.2e-119 431.8 345 61.2
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 1.6e-118 431.0 326 63.5
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 1.6e-118 431.0 353 62.0
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 4.6e-118 429.5 344 59.3
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 4.6e-118 429.5 342 59.9
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 2.3e-117 427.2 343 59.5
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.5e-116 424.5 361 57.1
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.9e-116 424.1 358 60.3
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 1.2e-115 421.4 347 59.1
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 2.1e-115 420.6 348 59.2
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.1e-114 418.3 348 60.1
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 1.1e-114 418.3 354 58.2
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 6.8e-114 415.6 334 60.8
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 1.5e-113 414.5 352 57.7
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 5.8e-113 412.5 358 55.3
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 7.6e-113 412.1 350 60.0
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 1.3e-112 411.4 359 57.7
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 1.7e-112 411.0 359 57.1
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 2.9e-112 410.2 335 60.3
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 4.9e-112 409.5 345 58.3
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 1.4e-111 407.9 333 58.0
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 1.9e-111 407.5 356 57.3
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 3.2e-111 406.8 332 58.4
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 4.1e-111 406.4 362 54.1
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 4.1e-111 406.4 299 62.5
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 5.4e-111 406.0 356 55.6
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 1.2e-110 404.8 326 58.9
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 4.6e-110 402.9 345 57.4
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 6.0e-110 402.5 344 57.8
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 7.8e-110 402.1 357 56.0
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 7.8e-110 402.1 361 56.2
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 7.8e-110 402.1 361 56.8
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 1.0e-109 401.7 344 58.1
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 1.3e-109 401.4 347 58.2
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 3.9e-109 399.8 352 54.8
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 3.9e-109 399.8 339 59.0
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 1.1e-108 398.3 358 53.6
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 1.9e-108 397.5 302 61.6
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 4.3e-108 396.4 359 54.3
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 1.2e-107 394.8 334 56.9
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 3.6e-107 393.3 354 55.4
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 1.4e-106 391.3 358 55.9
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 3.1e-106 390.2 353 53.5
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 3.1e-106 390.2 345 55.9
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 1.2e-105 388.3 358 53.9
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 1.5e-105 387.9 339 58.4
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.5e-105 387.9 351 56.4
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 2.0e-105 387.5 367 54.0
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 2.6e-105 387.1 356 55.3
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 7.6e-105 385.6 347 54.5
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 1.7e-104 384.4 357 54.9
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 2.2e-104 384.0 357 54.9
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 2.9e-104 383.6 362 53.0
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 3.8e-104 383.3 291 61.5
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 4.9e-104 382.9 345 55.1
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 4.9e-104 382.9 329 55.6
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 6.4e-104 382.5 356 52.8
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 8.4e-104 382.1 361 52.4
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 1.1e-103 381.7 324 57.1
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 3.2e-103 380.2 355 55.2
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 9.3e-103 378.6 323 54.8
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 1.2e-102 378.3 350 51.7
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 1.6e-102 377.9 350 51.7
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 2.7e-102 377.1 354 54.8
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 1.7e-101 374.4 343 53.9
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 2.3e-101 374.0 361 51.0
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 3.0e-101 373.6 337 53.1
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 5.1e-101 372.9 343 53.6
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 6.6e-101 372.5 327 53.8
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 8.7e-101 372.1 352 52.3
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 8.7e-101 372.1 351 53.8
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 4.3e-100 369.8 332 54.8
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 5.6e-100 369.4 355 52.7
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 1.6e-99 367.9 307 57.3
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 2.1e-99 367.5 338 54.1
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 2.1e-99 367.5 292 59.9
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 3.6e-99 366.7 348 54.3
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 8.1e-99 365.5 344 53.2
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 1.8e-98 364.4 355 52.1
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 7.6e-97 359.0 333 53.8
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 9.9e-97 358.6 334 51.5
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 2.9e-96 357.1 358 50.8
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 3.8e-96 356.7 343 52.2
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 3.2e-95 353.6 361 49.0
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 2.7e-94 350.5 321 53.9
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 7.9e-94 349.0 359 51.5
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 1.7e-93 347.8 247 66.8
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 2.3e-93 347.4 256 62.5
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 2.3e-93 347.4 310 53.5
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 1.1e-92 345.1 329 52.6
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 1.1e-92 345.1 406 45.8
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.1e-92 345.1 358 50.8
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 1.5e-92 344.7 357 47.9
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 9.6e-92 342.0 301 54.8
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 3.6e-91 340.1 361 50.4
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 1.1e-90 338.6 297 51.9
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 2.4e-90 337.4 332 53.6
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 4.0e-90 336.7 362 49.7
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 3.4e-89 333.6 341 51.3
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 4.5e-89 333.2 332 53.0
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 5.8e-89 332.8 368 49.2
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 7.6e-89 332.4 368 49.2
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 1.3e-88 331.6 354 49.4
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 2.2e-88 330.9 331 53.5
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 2.9e-88 330.5 334 50.6
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 3.8e-88 330.1 354 48.9
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 6.4e-88 329.3 356 49.2
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 1.4e-87 328.2 351 48.4
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 1.4e-87 328.2 351 48.4
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 4.2e-87 326.6 351 48.1
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 1.2e-86 325.1 342 50.6
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.1e-86 324.3 357 49.9
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 2.1e-86 324.3 380 47.1
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 2.7e-86 323.9 301 52.5
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.3e-85 321.6 357 49.6
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 1.8e-85 321.2 366 47.8
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 1.8e-85 321.2 270 56.3
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.5e-84 318.2 357 49.3
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 2.5e-84 317.4 341 49.3
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 5.6e-84 316.2 334 49.4
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 1.6e-83 314.7 326 49.4
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 1.8e-82 311.2 362 45.6
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 5.3e-82 309.7 327 48.9
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 5.3e-82 309.7 327 48.9
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 3.2e-79 300.4 273 55.7
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 5.1e-77 293.1 322 45.7
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 9.6e-76 288.9 228 59.6
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 2.4e-74 284.3 327 41.6
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 5.3e-74 283.1 322 47.8
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 3.5e-70 270.4 319 42.0
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.2e-65 255.4 324 42.0
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.5e-65 255.0 321 42.4
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 6.5e-64 249.6 323 41.2
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 2.5e-63 247.7 321 41.7
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 7.2e-63 246.1 267 49.4
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 3.3e-60 237.3 337 37.1
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 2.4e-58 231.1 290 42.1
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 8.5e-56 222.6 212 52.4
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 7.2e-55 219.5 338 36.4
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 2.7e-54 217.6 328 34.8
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 3.6e-54 217.2 273 39.2
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 3.6e-54 217.2 323 38.7
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 6.7e-53 213.0 210 47.1
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 1.3e-51 208.8 306 36.6
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 7.0e-50 203.0 335 33.4
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.2e-49 202.2 335 33.4
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.7e-48 198.4 191 49.2
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 2.9e-48 197.6 270 35.9
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.5e-47 195.3 137 67.2
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 5.3e-42 176.8 156 54.5
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 9.1e-42 176.0 118 69.5
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.3e-40 172.2 134 57.5
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 8.8e-37 159.5 111 67.6
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 7.0e-34 149.8 142 52.1
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 3.0e-29 134.4 128 52.3
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 3.5e-25 120.9 258 28.7
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.3e-24 118.2 161 39.8
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.1e-22 111.7 79 62.0
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 3.6e-22 110.9 89 56.2
MCO14G045 Micromonas commoda HOM05D000861 ORTHO05D004749 9.2e-18 96.3 202 28.2
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.3e-16 92.4 82 53.7
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 6.2e-14 83.6 99 47.5
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 8.0e-14 83.2 60 58.3
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 1.2e-09 69.3 69 47.8


User provided reference genes

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