Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 4.3e-66 254.6 136 100.0
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 1.3e-62 243.0 136 96.3
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 6.7e-43 177.6 128 70.3
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 1.3e-41 173.3 134 67.2
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 1.6e-41 172.9 128 71.1
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 6.2e-41 171.0 118 75.4
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 4.0e-40 168.3 129 67.4
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 4.0e-40 168.3 130 69.2
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 4.0e-40 168.3 130 69.2
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 1.2e-39 166.8 128 67.2
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 2.0e-39 166.0 131 65.6
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 2.6e-39 165.6 131 66.4
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 4.5e-39 164.9 119 69.7
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 4.5e-39 164.9 125 68.8
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 5.8e-39 164.5 122 68.0
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.3e-38 163.3 121 67.8
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 2.9e-38 162.2 122 66.4
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 4.9e-38 161.4 128 65.6
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 8.4e-38 160.6 123 65.9
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 1.1e-37 160.2 132 64.4
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 2.4e-37 159.1 118 68.6
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 3.2e-37 158.7 118 71.2
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 7.1e-37 157.5 128 66.4
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 7.1e-37 157.5 128 66.4
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 9.3e-37 157.1 124 67.7
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 9.3e-37 157.1 128 65.6
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 3.5e-36 155.2 126 61.9
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 3.5e-36 155.2 124 66.9
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 6.0e-36 154.5 128 63.3
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 6.0e-36 154.5 130 62.3
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 6.0e-36 154.5 134 60.4
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 6.0e-36 154.5 133 60.9
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 7.9e-36 154.1 121 65.3
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 7.9e-36 154.1 133 62.4
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 1.0e-35 153.7 132 60.6
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 2.3e-35 152.5 126 65.1
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 3.0e-35 152.1 128 63.3
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 3.9e-35 151.8 126 64.3
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 3.9e-35 151.8 125 64.8
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 3.9e-35 151.8 116 68.1
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 3.9e-35 151.8 116 67.2
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 3.9e-35 151.8 120 67.5
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 5.1e-35 151.4 132 61.4
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 8.7e-35 150.6 120 66.7
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 2.5e-34 149.1 125 60.0
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 3.3e-34 148.7 123 64.2
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 3.3e-34 148.7 118 63.6
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 4.3e-34 148.3 127 64.6
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 4.3e-34 148.3 120 66.7
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 9.6e-34 147.1 136 60.3
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 1.3e-33 146.7 124 64.5
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 3.7e-33 145.2 135 60.7
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 4.8e-33 144.8 119 63.9
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 6.2e-33 144.4 132 61.4
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 1.1e-32 143.7 118 62.7
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 1.4e-32 143.3 136 57.4
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 1.8e-32 142.9 129 61.2
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 2.4e-32 142.5 114 64.0
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 3.1e-32 142.1 163 52.8
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 6.9e-32 141.0 129 58.9
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 9.0e-32 140.6 129 59.7
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 1.2e-31 140.2 124 58.1
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 2.6e-31 139.0 125 55.2
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 4.5e-31 138.3 129 58.1
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 4.5e-31 138.3 132 57.6
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 4.5e-31 138.3 129 58.1
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 4.5e-31 138.3 129 58.1
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 4.5e-31 138.3 129 58.1
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 5.8e-31 137.9 135 56.3
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 5.8e-31 137.9 116 62.9
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 7.6e-31 137.5 133 55.6
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 7.6e-31 137.5 123 59.3
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 1.0e-30 137.1 130 57.7
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 1.0e-30 137.1 125 59.2
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 1.0e-30 137.1 116 62.9
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 1.0e-30 137.1 128 58.6
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 1.3e-30 136.7 116 61.2
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 1.7e-30 136.3 123 59.3
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 2.9e-30 135.6 123 58.5
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 6.5e-30 134.4 119 58.8
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 8.4e-30 134.0 120 58.3
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 1.1e-29 133.7 120 57.5
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 3.2e-29 132.1 119 56.3
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 5.5e-29 131.3 128 55.5
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 1.2e-28 130.2 150 52.0
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 1.6e-28 129.8 109 59.6
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 2.7e-28 129.0 83 74.7
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 2.7e-28 129.0 83 74.7
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 3.5e-28 128.6 119 55.5
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 2.3e-27 125.9 120 54.2
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 3.0e-27 125.6 116 57.8
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 5.7e-26 121.3 128 57.0
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 7.4e-26 120.9 92 64.1
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 7.4e-26 120.9 150 47.3
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 1.3e-25 120.2 110 60.0
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 6.3e-25 117.9 86 69.8
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 8.2e-25 117.5 121 55.4
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 8.2e-25 117.5 129 54.3
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 1.2e-23 113.6 108 52.8
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 1.5e-23 113.2 84 69.0
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 4.5e-23 111.7 86 68.6
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 5.9e-23 111.3 90 62.2
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.0e-22 110.5 90 62.2
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 2.2e-22 109.4 90 62.2
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 4.6e-20 101.7 82 63.4
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 8.8e-19 97.4 67 73.1
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 3.3e-18 95.5 74 64.9
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 5.7e-18 94.7 95 57.9
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 7.4e-18 94.4 116 46.6
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 7.4e-18 94.4 109 51.4
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 4.2e-13 78.6 75 58.7
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 4.2e-13 78.6 114 41.2
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 3.0e-11 72.4 93 50.5
ECA233G3375 Erigeron canadensis HOM05D007048 ORTHO05D008811 9.7e-10 67.4 102 38.2
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 3.7e-09 65.5 39 79.5
RcHm_v2.0_Chr5g0067941 Rosa chinensis HOM05D052544 ORTHO05D008811 2.0e-07 59.7 53 56.6


User provided reference genes

Program Settings