Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 4.0e-221 771.2 402 100.0
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 1.5e-212 742.7 402 96.5
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 1.4e-128 463.8 334 72.8
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 6.4e-126 454.9 334 71.6
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 4.1e-125 452.2 404 62.4
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 1.2e-124 450.7 341 70.1
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 1.0e-123 447.6 386 63.5
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 1.7e-123 446.8 332 72.3
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 2.3e-123 446.4 383 63.7
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 3.0e-123 446.0 353 66.3
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 3.0e-123 446.0 393 64.4
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 6.6e-123 444.9 339 70.2
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 3.3e-122 442.6 329 71.4
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 3.3e-122 442.6 383 63.2
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 4.3e-122 442.2 388 62.1
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 5.6e-122 441.8 391 64.2
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 6.2e-121 438.3 351 66.4
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 6.2e-121 438.3 347 69.7
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 1.4e-120 437.2 328 71.3
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 1.8e-120 436.8 370 65.9
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 3.1e-120 436.0 386 64.2
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 8.9e-120 434.5 333 71.5
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 1.2e-119 434.1 339 69.3
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 2.6e-119 433.0 333 68.8
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 2.9e-118 429.5 339 67.8
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 3.8e-118 429.1 330 70.9
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 6.4e-118 428.3 345 67.8
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 1.1e-117 427.6 326 69.6
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 1.1e-117 427.6 336 67.3
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 1.1e-117 427.6 345 65.5
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 1.9e-117 426.8 370 64.6
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 5.4e-117 425.2 376 63.8
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 7.1e-117 424.9 280 77.1
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 9.2e-117 424.5 286 76.9
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 1.2e-116 424.1 330 69.7
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.2e-116 424.1 375 63.2
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 2.7e-116 422.9 335 69.3
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 2.7e-116 422.9 286 76.6
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 4.6e-116 422.2 377 63.7
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 4.6e-116 422.2 377 63.7
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 6.0e-116 421.8 346 67.3
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 2.3e-115 419.9 268 79.9
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 3.0e-115 419.5 267 83.1
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 3.9e-115 419.1 269 78.8
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 8.6e-115 417.9 336 66.7
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 8.6e-115 417.9 338 66.6
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 8.6e-115 417.9 337 67.1
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 8.6e-115 417.9 336 67.9
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 1.1e-114 417.5 401 61.6
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 1.1e-114 417.5 346 66.5
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 1.9e-114 416.8 340 66.5
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 1.9e-114 416.8 286 76.2
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 3.3e-114 416.0 345 65.2
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 4.3e-114 415.6 278 77.3
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 4.3e-114 415.6 282 75.2
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 5.6e-114 415.2 335 66.0
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 5.6e-114 415.2 260 81.5
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 5.6e-114 415.2 336 67.0
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 1.2e-113 414.1 331 67.1
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 1.6e-113 413.7 339 66.1
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.6e-113 413.7 259 79.9
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 2.1e-113 413.3 294 72.8
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 2.8e-113 412.9 345 64.6
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 4.7e-113 412.1 329 67.5
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 1.4e-112 410.6 329 66.9
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 1.4e-112 410.6 329 66.9
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 1.8e-112 410.2 334 66.2
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 3.1e-112 409.5 292 74.3
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 3.1e-112 409.5 373 62.5
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 4.0e-112 409.1 334 66.2
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 8.9e-112 407.9 336 67.0
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 2.6e-111 406.4 338 64.5
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 6.4e-110 401.7 328 65.9
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 5.4e-109 398.7 320 67.8
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 9.3e-109 397.9 334 64.4
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 1.2e-108 397.5 277 73.6
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 2.1e-108 396.7 277 74.7
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 3.0e-107 392.9 333 65.2
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 3.0e-107 392.9 308 68.2
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 1.9e-106 390.2 382 58.1
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 2.5e-106 389.8 316 66.5
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 1.6e-105 387.1 328 68.3
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 3.6e-105 386.0 339 63.4
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 4.8e-105 385.6 247 79.8
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 1.5e-103 380.6 322 64.9
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 2.0e-103 380.2 306 67.0
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 4.2e-101 372.5 277 69.3
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 1.2e-100 370.9 242 79.3
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 3.5e-100 369.4 319 64.9
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 6.7e-99 365.2 341 58.7
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 1.9e-98 363.6 408 52.9
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 2.5e-98 363.2 322 61.5
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 1.3e-97 360.9 413 51.8
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 1.6e-97 360.5 269 66.9
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 1.8e-96 357.1 369 56.1
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 2.6e-95 353.2 291 65.6
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 7.9e-92 341.7 328 60.1
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 3.9e-91 339.3 294 62.9
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 5.1e-91 339.0 339 57.5
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 7.6e-87 325.1 271 64.9
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.0e-86 324.7 207 80.2
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 2.2e-86 323.6 284 62.7
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 9.3e-85 318.2 238 69.7
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 1.9e-82 310.5 298 59.4
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 1.1e-80 304.7 272 57.4
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 2.0e-79 300.4 263 58.9
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 5.0e-78 295.8 292 60.6
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 7.4e-74 282.0 370 50.3
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 2.8e-73 280.0 178 80.9
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 9.1e-72 275.0 345 51.6
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 3.4e-71 273.1 278 54.7
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 2.5e-69 266.9 289 51.2
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 4.6e-68 262.7 187 71.7
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 2.5e-61 240.4 226 58.0
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 3.2e-61 240.0 262 50.0
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 2.1e-60 237.3 157 76.4
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 1.1e-58 231.5 244 56.1
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.2e-50 204.9 129 79.8
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 2.6e-50 203.8 134 76.1
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 1.3e-49 201.4 128 78.1
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 3.2e-45 186.8 115 84.3
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.7e-38 164.5 105 76.2
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.7e-38 164.5 256 36.7
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 1.7e-25 121.3 187 36.9
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 3.7e-25 120.2 82 79.3
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 3.2e-24 117.1 176 39.8
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 2.0e-23 114.4 87 71.3
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 2.1e-12 77.8 244 26.6
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 5.2e-11 73.2 107 42.1
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 5.2e-11 73.2 38 94.7
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 1.5e-10 71.6 66 62.1
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 1.6e-07 61.6 36 83.3
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 5.1e-06 56.6 51 54.9


User provided reference genes

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