Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 1.1e-99 366.7 191 100.0
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 8.6e-97 357.1 191 97.4
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 4.4e-85 318.2 193 88.1
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 1.3e-60 236.9 196 66.3
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 2.9e-60 235.7 197 66.5
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 6.4e-60 234.6 198 67.2
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 1.4e-59 233.4 199 65.8
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 2.4e-59 232.6 193 66.8
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 3.2e-59 232.3 193 66.8
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 4.2e-59 231.9 197 65.5
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 2.1e-58 229.6 198 65.7
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 7.9e-58 227.6 195 65.1
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 2.3e-57 226.1 194 66.5
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 1.5e-56 223.4 195 64.6
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 1.9e-56 223.0 198 64.1
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 3.3e-56 222.2 195 63.6
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 3.3e-56 222.2 195 63.6
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 5.6e-56 221.5 199 65.3
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 4.8e-55 218.4 182 68.1
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 6.2e-55 218.0 195 63.6
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 1.8e-54 216.5 198 63.1
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 1.8e-54 216.5 198 63.1
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 2.4e-54 216.1 195 62.6
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 3.1e-54 215.7 194 63.4
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 3.1e-54 215.7 198 61.6
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 1.2e-53 213.8 195 64.1
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 1.2e-53 213.8 193 64.2
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 1.5e-53 213.4 196 63.8
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 1.5e-53 213.4 193 62.7
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 2.0e-53 213.0 192 64.1
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 3.4e-53 212.2 194 62.4
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 3.4e-53 212.2 196 60.2
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 4.5e-53 211.8 195 63.1
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 4.5e-53 211.8 197 63.5
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 1.3e-52 210.3 193 61.1
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 1.7e-52 209.9 201 64.2
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 1.7e-52 209.9 193 61.1
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 2.2e-52 209.5 193 61.1
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 2.9e-52 209.1 190 64.2
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 4.9e-52 208.4 200 62.0
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 4.9e-52 208.4 193 60.6
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 4.9e-52 208.4 203 60.1
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 8.4e-52 207.6 194 62.4
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 1.4e-51 206.8 193 59.6
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 1.4e-51 206.8 196 61.7
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 3.2e-51 205.7 195 62.1
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 9.3e-51 204.1 193 60.1
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 1.6e-50 203.4 194 57.2
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 2.1e-50 203.0 190 59.5
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 3.5e-50 202.2 199 58.8
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 3.5e-50 202.2 195 62.6
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 6.0e-50 201.4 193 59.6
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 1.0e-49 200.7 193 60.6
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 1.8e-49 199.9 195 61.0
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 2.3e-49 199.5 196 60.2
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 2.3e-49 199.5 195 57.4
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 3.0e-49 199.1 194 61.9
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 1.5e-48 196.8 183 61.2
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 1.5e-48 196.8 193 57.0
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 1.5e-48 196.8 195 59.5
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 3.3e-48 195.7 197 59.4
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 1.3e-47 193.7 191 57.1
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 2.1e-47 193.0 186 60.2
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 6.3e-47 191.4 174 63.2
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 1.1e-46 190.7 190 53.2
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 4.1e-46 188.7 180 60.0
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 5.3e-46 188.3 192 56.2
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 6.9e-46 188.0 194 55.2
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 9.0e-46 187.6 203 57.6
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 1.2e-45 187.2 196 58.2
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 1.5e-45 186.8 195 58.5
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 3.4e-45 185.7 197 58.4
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 4.5e-45 185.3 194 56.2
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 5.9e-45 184.9 185 57.3
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 2.9e-44 182.6 192 59.4
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 8.5e-44 181.0 194 55.7
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 8.5e-44 181.0 194 55.7
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 1.9e-43 179.9 195 57.4
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 3.2e-43 179.1 191 52.9
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 3.2e-43 179.1 191 56.0
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 3.2e-43 179.1 194 55.7
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 1.2e-42 177.2 191 54.5
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 1.6e-42 176.8 196 54.6
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 2.7e-42 176.0 194 54.1
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 6.1e-42 174.9 194 54.1
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 1.8e-41 173.3 194 55.2
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 2.3e-41 172.9 194 55.2
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 3.9e-41 172.2 173 56.6
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 5.1e-41 171.8 149 63.1
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 4.3e-40 168.7 193 51.8
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 7.4e-40 167.9 187 51.3
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 7.4e-40 167.9 177 58.8
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 9.7e-40 167.5 176 57.4
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 4.1e-38 162.2 219 48.9
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 6.9e-38 161.4 193 48.7
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 1.5e-37 160.2 153 61.4
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 7.7e-37 157.9 199 49.2
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 5.0e-36 155.2 196 48.5
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 1.4e-35 153.7 188 46.8
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 1.9e-35 153.3 192 49.0
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 7.2e-35 151.4 207 45.4
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 7.9e-34 147.9 184 49.5
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 1.4e-33 147.1 191 50.8
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 1.5e-32 143.7 194 46.9
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 2.0e-32 143.3 193 46.6
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 5.7e-32 141.7 146 55.5
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 1.7e-31 140.2 191 45.5
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 2.6e-29 132.9 196 43.9
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 2.6e-29 132.9 147 57.1
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 1.7e-28 130.2 191 44.0
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 3.8e-28 129.0 192 42.7
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 3.8e-28 129.0 192 42.7
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 1.4e-27 127.1 222 40.5
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 1.4e-27 127.1 135 60.7
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 4.2e-27 125.6 191 41.4
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 7.2e-27 124.8 212 40.1
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 5.2e-25 118.6 82 73.2
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 1.5e-24 117.1 82 72.0
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 2.0e-24 116.7 114 61.4
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 9.7e-24 114.4 83 73.5
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 9.7e-24 114.4 144 50.7
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 3.7e-23 112.5 115 58.3
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 1.1e-22 110.9 72 83.3
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 1.4e-22 110.5 173 41.0
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 1.6e-21 107.1 85 67.1
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 5.0e-20 102.1 81 63.0
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 5.0e-20 102.1 149 43.6
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 6.5e-20 101.7 89 59.6
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 1.5e-19 100.5 149 47.0
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 1.0e-17 94.4 62 77.4
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 5.7e-16 88.6 157 38.9
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 5.7e-16 88.6 69 68.1
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 1.1e-14 84.3 99 48.5
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.4e-14 84.0 107 55.1
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 2.4e-14 83.2 154 37.7
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 1.6e-13 80.5 74 55.4
Aa31LG2G19570 Aethionema arabicum HOM05D005762 ORTHO05D006823 3.5e-13 79.3 85 55.3
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 7.2e-11 71.6 178 31.5
MD02G1004700 Malus domestica HOM05D005762 ORTHO05D006823 1.0e-09 67.8 49 63.3
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 3.4e-08 62.8 49 69.4
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 7.0e-06 55.1 73 50.7


User provided reference genes

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