Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 6.4e-151 537.3 263 100.0
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 1.2e-144 516.5 263 96.2
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 5.0e-103 378.3 264 70.1
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 2.1e-101 372.9 262 70.6
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 2.1e-101 372.9 260 70.0
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 4.6e-101 371.7 267 68.9
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 3.0e-100 369.0 266 69.9
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 5.7e-99 364.8 259 69.1
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 1.3e-98 363.6 264 70.5
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 2.8e-98 362.5 268 67.5
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 1.8e-97 359.8 262 67.6
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 6.9e-97 357.8 263 68.8
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 1.2e-96 357.1 276 66.7
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 1.5e-96 356.7 261 68.6
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 1.5e-96 356.7 257 68.5
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 5.9e-96 354.8 211 76.8
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 2.9e-95 352.4 265 67.2
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 1.1e-94 350.5 263 67.7
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 5.5e-94 348.2 257 67.3
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 9.4e-94 347.4 272 64.3
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 2.1e-93 346.3 261 66.7
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 3.6e-93 345.5 257 66.5
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 4.7e-93 345.1 212 76.4
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 6.1e-93 344.7 265 64.9
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 6.1e-93 344.7 260 66.5
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 1.0e-92 344.0 265 65.3
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 1.0e-92 344.0 261 67.8
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 1.4e-92 343.6 261 65.5
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 1.8e-92 343.2 261 66.7
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 1.8e-92 343.2 262 65.6
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 3.0e-92 342.4 264 66.3
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 3.0e-92 342.4 261 66.7
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 5.2e-92 341.7 209 76.1
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 6.7e-92 341.3 260 65.4
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 4.4e-91 338.6 262 66.4
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 4.4e-91 338.6 261 65.1
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 5.7e-91 338.2 260 65.4
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 7.4e-91 337.8 266 65.0
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 1.3e-90 337.0 259 68.0
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 1.3e-90 337.0 232 69.0
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 3.7e-90 335.5 262 66.0
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 4.8e-90 335.1 269 64.7
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 4.8e-90 335.1 269 64.7
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 2.4e-89 332.8 264 64.4
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 2.4e-89 332.8 212 76.4
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 9.1e-89 330.9 207 74.9
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 9.1e-89 330.9 207 74.9
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 1.2e-88 330.5 264 64.0
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 1.6e-88 330.1 285 58.9
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 5.9e-88 328.2 265 64.5
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 1.0e-87 327.4 272 62.1
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 1.3e-87 327.0 261 62.8
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 2.9e-87 325.9 268 61.9
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 5.0e-87 325.1 231 67.1
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 8.5e-87 324.3 269 62.5
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 1.1e-86 323.9 266 62.4
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 1.5e-86 323.6 200 74.5
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 3.2e-86 322.4 272 61.8
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 7.2e-86 321.2 213 71.8
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 2.1e-85 319.7 261 64.0
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 3.0e-84 315.8 254 63.8
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 4.0e-84 315.5 254 63.4
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 4.0e-84 315.5 254 63.0
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 5.2e-84 315.1 273 60.8
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 8.8e-84 314.3 253 63.2
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 2.0e-83 313.2 261 62.8
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 2.6e-83 312.8 259 64.9
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 7.5e-83 311.2 254 63.4
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 1.7e-82 310.1 254 63.4
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 2.8e-82 309.3 256 62.9
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 1.8e-81 306.6 210 70.0
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 4.1e-81 305.4 343 50.7
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 1.3e-79 300.4 244 62.3
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.3e-79 300.4 262 59.9
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 1.5e-78 297.0 272 59.9
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 1.9e-78 296.6 213 64.3
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 3.2e-78 295.8 211 70.1
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 4.7e-77 292.0 176 76.1
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 4.7e-77 292.0 177 76.8
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 8.0e-77 291.2 225 65.8
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 1.2e-75 287.3 175 75.4
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 1.5e-75 287.0 268 58.2
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 1.8e-73 280.0 271 58.7
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 2.4e-73 279.6 213 65.7
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 7.7e-72 274.6 205 66.8
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.8e-68 263.5 257 56.8
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 8.9e-68 261.2 163 72.4
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 1.5e-67 260.4 200 63.0
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 4.5e-64 248.8 219 60.3
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 9.5e-62 241.1 209 59.8
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 9.5e-62 241.1 210 58.6
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 2.1e-61 240.0 204 57.4
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 4.0e-60 235.7 184 61.4
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 1.4e-57 227.3 157 66.2
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 1.2e-56 224.2 161 65.2
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 8.6e-55 218.0 161 63.4
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 8.6e-55 218.0 253 49.4
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 5.2e-52 208.8 135 69.6
PGSC0003DMG400006881 Solanum tuberosum HOM05D006647 ORTHO05D008232 1.5e-46 190.7 114 77.2
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 3.3e-46 189.5 201 55.2
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 6.2e-45 185.3 136 66.2
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 6.2e-45 185.3 161 58.4
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 1.4e-44 184.1 174 58.6
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.8e-44 183.7 165 59.4
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 5.2e-44 182.2 111 75.7
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 5.8e-43 178.7 159 57.9
Cpa.g.sc234.12 Carica papaya HOM05D006647 ORTHO05D008232 1.7e-42 177.2 112 74.1
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 3.2e-41 172.9 174 49.4
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 1.6e-37 160.6 158 55.7
Aa31LG10G17440 Aethionema arabicum HOM05D006647 ORTHO05D008232 2.8e-37 159.8 107 72.0
BcaB01g01017 Brassica carinata HOM05D006647 ORTHO05D008232 1.4e-36 157.5 107 69.2
BcaB04g18808 Brassica carinata HOM05D006647 ORTHO05D008232 1.4e-36 157.5 107 69.2
FAN01G1906 Fragaria x ananassa HOM05D006647 ORTHO05D008232 5.8e-35 152.1 94 75.5
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 9.9e-35 151.4 81 85.2
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 1.3e-34 151.0 86 77.9
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 1.4e-33 147.5 136 61.0
Ah.10g029810 Amaranthus hybridus HOM05D006647 ORTHO05D008232 4.6e-32 142.5 94 71.3
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 4.2e-25 119.4 155 48.4
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 6.6e-23 112.1 100 59.0
PRCOL_00005260 Prasinoderma coloniale HOM05D006647 ORTHO05D008232 4.5e-19 99.4 163 38.0
Cc02_g27540 Coffea canephora HOM05D006647 ORTHO05D153686 1.6e-08 64.3 84 42.9


User provided reference genes

Program Settings