Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 6.8e-295 1016.5 496 100.0
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 4.1e-199 698.4 512 69.3
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 1.6e-190 669.8 473 68.1
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 8.5e-189 664.1 474 68.8
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 8.0e-187 657.5 473 66.8
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 8.0e-187 657.5 485 66.6
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 8.8e-186 654.1 475 67.2
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 2.7e-182 642.5 474 65.8
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 4.0e-178 628.6 471 66.0
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 3.4e-177 625.5 475 64.2
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 6.4e-176 621.3 475 63.8
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 8.3e-176 620.9 468 65.2
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 2.4e-175 619.4 474 64.3
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 5.4e-175 618.2 475 64.0
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 3.5e-174 615.5 487 62.6
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 3.5e-174 615.5 475 63.8
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 8.6e-173 610.9 477 61.8
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 6.2e-171 604.7 473 64.1
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 9.8e-169 597.4 481 61.3
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 2.2e-168 596.3 478 62.6
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 6.4e-168 594.7 478 62.3
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 2.3e-165 586.3 474 62.4
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 1.5e-164 583.6 471 62.0
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 1.9e-164 583.2 474 58.4
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 2.5e-164 582.8 483 61.1
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 7.3e-164 581.3 478 61.3
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 7.3e-164 581.3 473 61.1
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 1.2e-163 580.5 487 58.3
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 1.6e-163 580.1 485 58.4
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 3.6e-163 578.9 465 60.4
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 3.6e-163 578.9 481 60.1
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 1.8e-162 576.6 479 59.9
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 3.1e-162 575.9 479 59.9
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 3.1e-162 575.9 475 60.0
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 8.9e-162 574.3 473 60.3
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 5.8e-161 571.6 475 61.3
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 1.4e-159 567.0 479 59.5
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 3.2e-159 565.8 457 61.7
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 2.1e-158 563.1 496 56.5
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 3.5e-158 562.4 475 59.4
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 7.8e-158 561.2 444 63.1
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 2.3e-154 549.7 484 56.0
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 4.0e-154 548.9 535 52.9
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 6.8e-154 548.1 533 54.2
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 1.9e-151 540.0 374 69.0
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 3.5e-150 535.8 387 66.1
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 2.5e-148 529.6 285 93.0
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 6.9e-146 521.5 513 53.4
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 1.5e-145 520.4 386 66.6
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 1.1e-143 514.2 475 55.8
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 1.1e-143 514.2 475 54.5
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 1.2e-142 510.8 487 55.2
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 1.2e-142 510.8 389 65.0
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 4.6e-142 508.8 486 56.4
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 7.8e-142 508.1 463 57.5
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 7.8e-142 508.1 475 53.9
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 3.3e-140 502.7 581 48.4
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 2.8e-139 499.6 486 54.3
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 5.3e-138 495.4 473 53.5
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 9.0e-138 494.6 483 51.6
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 2.0e-137 493.4 475 51.8
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 5.8e-137 491.9 490 54.5
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 5.8e-137 491.9 530 51.1
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 7.9e-134 481.5 478 51.3
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 3.0e-133 479.6 475 50.9
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 1.9e-132 476.9 481 52.8
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 2.5e-132 476.5 477 50.5
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 3.3e-132 476.1 475 49.9
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 3.3e-132 476.1 435 57.5
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 9.6e-132 474.6 473 51.0
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 9.6e-132 474.6 473 54.5
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 1.6e-131 473.8 478 50.8
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 6.2e-131 471.9 486 50.4
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 1.4e-130 470.7 478 50.4
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 9.0e-130 468.0 513 49.9
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 5.8e-129 465.3 391 61.4
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 2.4e-127 459.9 473 49.5
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 9.3e-127 458.0 510 50.2
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 5.1e-125 452.2 517 46.8
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 7.4e-124 448.4 325 67.1
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 1.3e-123 447.6 481 48.2
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 6.2e-123 445.3 524 46.8
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 2.4e-122 443.4 475 50.5
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 3.8e-120 436.0 479 50.7
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 4.9e-120 435.6 479 50.3
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 2.7e-118 429.9 463 51.4
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 1.5e-116 424.1 467 48.4
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 3.3e-116 422.9 457 49.7
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 2.0e-113 413.7 329 60.5
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 3.7e-99 366.3 310 59.7
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 1.1e-95 354.8 293 61.4
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 7.2e-95 352.1 263 65.8
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 5.2e-93 345.9 486 38.9
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 2.6e-92 343.6 290 59.3
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 1.5e-87 327.8 293 58.0
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 1.9e-87 327.4 285 57.2
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 7.0e-82 308.9 328 50.0
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 2.8e-70 270.4 191 67.5
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 4.7e-70 269.6 512 34.4
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 1.5e-68 264.6 156 79.5
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 1.4e-66 258.1 184 67.4
MSTRG.17573 Avicennia marina HOM05D006389 ORTHO05D007863 2.4e-66 257.3 206 60.2
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 3.5e-65 253.4 189 65.1
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 2.2e-59 234.2 229 53.7
Ciclev10018279m.g Citrus clementina HOM05D006389 ORTHO05D007863 1.1e-58 231.9 168 66.1
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 4.6e-57 226.5 452 33.4
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 3.0e-48 197.2 163 57.1
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 8.3e-43 179.1 355 34.4
HanXRQChr14g0450961 Helianthus annuus HOM05D006389 ORTHO05D007863 3.5e-33 147.1 190 43.2
Nitab4.5_0000175g0160 Nicotiana tabacum HOM05D006389 ORTHO05D007863 4.3e-31 140.2 130 51.5
CSS0015492 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 2.2e-27 127.9 85 68.2
Peaxi162Scf00185g00310 Petunia axillaris HOM05D006389 ORTHO05D007863 2.0e-20 104.8 132 42.4
SHI30507 Sapria himalayana HOM05D006389 ORTHO05D007863 3.8e-19 100.5 91 53.8
MCO05G648 Micromonas commoda HOM05D006389 ORTHO05D007863 2.4e-18 97.8 370 25.9
Psat4g014880 Pisum sativum HOM05D006389 ORTHO05D007863 1.0e-16 92.4 154 35.1
arahy.Tifrunner.gnm1.ann1.RII35Q Arachis hypogaea HOM05D006389 ORTHO05D007863 2.5e-15 87.8 299 26.1
HanXRQChr13g0389161 Helianthus annuus HOM05D006389 ORTHO05D007863 9.6e-15 85.9 53 71.7
MBI01_g14332_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 2.4e-13 81.3 101 45.5
vmacro04177 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 7.6e-12 76.3 92 40.2
Peaxi162Scf00559g00110 Petunia axillaris HOM05D006389 ORTHO05D007863 2.1e-09 68.2 64 51.6
SEGI_11371 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 1.8e-08 65.1 53 54.7


User provided reference genes

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