Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G5084 Papaver somniferum HOM05D006328 ORTHO05D007721 4.4e-141 504.6 249 100.0
PSO384G1580 Papaver somniferum HOM05D006328 ORTHO05D007721 2.2e-137 492.3 249 97.6
Nn7g35935 Nelumbo nucifera HOM05D006328 ORTHO05D007721 2.5e-88 329.3 253 68.4
TAR633G0950 Trochodendron aralioides HOM05D006328 ORTHO05D007721 1.2e-82 310.5 256 63.3
TAR633G1956 Trochodendron aralioides HOM05D006328 ORTHO05D007721 4.6e-82 308.5 256 62.9
ATR0598G038 Amborella trichopoda HOM05D006328 ORTHO05D007721 8.6e-81 304.3 189 77.2
CiPaw.13G173100 Carya illinoinensis HOM05D006328 ORTHO05D007721 2.5e-80 302.8 261 62.1
MBI13_g29633_MAGBIO Magnolia biondii HOM05D006328 ORTHO05D007721 5.6e-80 301.6 205 73.7
HPP92_009650 Vanilla planifolia HOM05D006328 ORTHO05D007721 9.5e-80 300.8 197 73.6
GSVIVG01025405001 Vitis vinifera HOM05D006328 ORTHO05D007721 3.6e-79 298.9 196 75.5
Thecc.09G213100 Theobroma cacao HOM05D006328 ORTHO05D007721 1.1e-78 297.4 258 63.2
AL5G20530 Arabidopsis lyrata HOM05D006328 ORTHO05D007721 1.8e-78 296.6 251 61.4
Dinv13426 Davidia involucrata HOM05D006328 ORTHO05D007721 1.8e-78 296.6 227 67.4
PGSC0003DMG400032183 Solanum tuberosum HOM05D006328 ORTHO05D007721 2.4e-78 296.2 223 69.1
Nitab4.5_0000775g0140 Nicotiana tabacum HOM05D006328 ORTHO05D007721 6.8e-78 294.7 219 68.0
Aqoxy1G00065 Aquilegia oxysepala HOM05D006328 ORTHO05D007721 8.9e-78 294.3 249 62.7
Gohir.D13G217500 Gossypium hirsutum HOM05D006328 ORTHO05D007721 8.9e-78 294.3 255 62.4
CAN.G158.4 Capsicum annuum HOM05D006328 ORTHO05D007721 1.2e-77 293.9 230 67.8
Gorai.013G248000 Gossypium raimondii HOM05D006328 ORTHO05D007721 1.2e-77 293.9 255 62.4
Lsat_1_v5_gn_2_101560 Lactuca sativa HOM05D006328 ORTHO05D007721 1.2e-77 293.9 224 66.5
Actinidia16265 Actinidia chinensis HOM05D006328 ORTHO05D007721 1.5e-77 293.5 209 70.3
Sopen01g002030 Solanum pennellii HOM05D006328 ORTHO05D007721 2.0e-77 293.1 223 68.6
Cc01_g01550 Coffea canephora HOM05D006328 ORTHO05D007721 2.6e-77 292.7 254 62.2
Eucgr.B03625 Eucalyptus grandis HOM05D006328 ORTHO05D007721 2.6e-77 292.7 185 76.2
Manes.03G088400 Manihot esculenta HOM05D006328 ORTHO05D007721 3.4e-77 292.4 256 62.1
Nitab4.5_0011368g0030 Nicotiana tabacum HOM05D006328 ORTHO05D007721 3.4e-77 292.4 219 68.0
Solyc01g006020.4 Solanum lycopersicum HOM05D006328 ORTHO05D007721 3.4e-77 292.4 223 68.2
Aa31LG4G12590 Aethionema arabicum HOM05D006328 ORTHO05D007721 4.4e-77 292.0 193 73.1
COL.COLO4_34990 Corchorus olitorius HOM05D001240 ORTHO05D002450 4.4e-77 292.0 225 67.1
THA.LOC104811061 Tarenaya hassleriana HOM05D006328 ORTHO05D007721 4.4e-77 292.0 203 70.0
EL10Ac4g10350 Beta vulgaris HOM05D006328 ORTHO05D007721 5.8e-77 291.6 188 75.5
PGR102G1639 Punica granatum HOM05D006328 ORTHO05D007721 7.6e-77 291.2 257 61.1
QL01p007982 Quercus lobata HOM05D006328 ORTHO05D007721 9.9e-77 290.8 260 61.5
Cpa.g.sc119.81 Carica papaya HOM05D006328 ORTHO05D007721 1.3e-76 290.4 266 58.6
Peaxi162Scf00100g00716 Petunia axillaris HOM05D006328 ORTHO05D007721 1.7e-76 290.0 220 67.7
CARHR153570 Cardamine hirsuta HOM05D006328 ORTHO05D007721 2.2e-76 289.7 203 69.5
C07p38710 Brassica napus HOM05D006328 ORTHO05D007721 2.9e-76 289.3 225 64.4
Ciclev10016391m.g Citrus clementina HOM05D006328 ORTHO05D007721 2.9e-76 289.3 244 61.9
ECA238G4721 Erigeron canadensis HOM05D006328 ORTHO05D007721 3.8e-76 288.9 204 69.1
Gohir.A13G213700 Gossypium hirsutum HOM05D006328 ORTHO05D007721 3.8e-76 288.9 255 62.0
AT3G32930 Arabidopsis thaliana HOM05D006328 ORTHO05D007721 6.4e-76 288.1 251 60.2
A06p39560 Brassica napus HOM05D006328 ORTHO05D007721 8.4e-76 287.7 225 63.6
BraA06t26871Z Brassica rapa HOM05D006328 ORTHO05D007721 8.4e-76 287.7 225 63.6
Carub.0003s3500 Capsella rubella HOM05D006328 ORTHO05D007721 8.4e-76 287.7 214 66.8
MD08G1205200 Malus domestica HOM05D006328 ORTHO05D007721 1.4e-75 287.0 261 61.3
Hma1.2p1_0062F.1_g034170 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 2.4e-75 286.2 183 73.8
Lj1A460T3 Lonicera japonica HOM05D006328 ORTHO05D007721 3.2e-75 285.8 245 62.4
Oeu029372.1 Olea europaea HOM05D006328 ORTHO05D007721 4.1e-75 285.4 197 69.5
unitig_746.g26630 Utricularia gibba HOM05D006328 ORTHO05D007721 4.1e-75 285.4 239 64.0
CDE06G2606 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 5.4e-75 285.0 184 72.8
HanXRQChr07g0196761 Helianthus annuus HOM05D006328 ORTHO05D007721 5.4e-75 285.0 225 65.3
Potri.003G216700 Populus trichocarpa HOM05D006328 ORTHO05D007721 5.4e-75 285.0 260 59.2
Sp2g18300 Schrenkiella parvula HOM05D006328 ORTHO05D007721 7.1e-75 284.6 200 69.5
MSTRG.18860 Avicennia marina HOM05D006328 ORTHO05D007721 9.2e-75 284.3 250 59.2
BcaB04g19533 Brassica carinata HOM05D006328 ORTHO05D007721 9.2e-75 284.3 226 62.8
CSS0031266 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 9.2e-75 284.3 204 69.1
CANSAT11G2432 Cannabis sativa HOM05D006328 ORTHO05D007721 9.2e-75 284.3 253 59.7
Atru.chr3.2259 Acer truncatum HOM05D006328 ORTHO05D007721 1.2e-74 283.9 192 73.4
Atru.chr3.2265 Acer truncatum HOM05D006328 ORTHO05D007721 1.2e-74 283.9 192 73.4
FvH4_3g44830 Fragaria vesca HOM05D006328 ORTHO05D007721 2.1e-74 283.1 192 73.4
Glyma.08G315600 Glycine max HOM05D006328 ORTHO05D007721 2.1e-74 283.1 239 62.8
SalBow6G6014 Salvia bowleyana HOM05D006328 ORTHO05D007721 2.1e-74 283.1 202 70.3
FAN11G1794 Fragaria x ananassa HOM05D006328 ORTHO05D007721 2.7e-74 282.7 262 59.5
RcHm_v2.0_Chr5g0081531 Rosa chinensis HOM05D006328 ORTHO05D007721 2.7e-74 282.7 192 72.9
Haze_22985 Corylus avellana HOM05D006328 ORTHO05D007721 6.0e-74 281.6 309 54.0
Phvul.006G042800 Phaseolus vulgaris HOM05D006328 ORTHO05D007721 6.0e-74 281.6 238 62.2
FAN16G1952 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.0e-73 280.8 194 72.2
ClCG08G005770 Citrullus lanatus HOM05D006328 ORTHO05D007721 1.3e-73 280.4 191 72.8
SGA_v2.0_scaffold6G03437 Striga asiatica HOM05D006328 ORTHO05D007721 1.3e-73 280.4 205 69.3
BcaC04g23807 Brassica carinata HOM05D006328 ORTHO05D007721 1.7e-73 280.0 225 63.1
C09p04470 Brassica napus HOM05D006328 ORTHO05D007721 1.7e-73 280.0 225 63.1
BolC9t53377H Brassica oleracea HOM05D006328 ORTHO05D007721 1.7e-73 280.0 225 63.1
MELO3C015648.2 Cucumis melo HOM05D006328 ORTHO05D007721 1.7e-73 280.0 191 72.3
Sed0015335 Sechium edule HOM05D006328 ORTHO05D007721 1.7e-73 280.0 260 58.5
ClCG03G013990 Citrullus lanatus HOM05D006328 ORTHO05D007721 2.3e-73 279.6 191 72.3
Lalb_Chr10g0091951 Lupinus albus HOM05D006328 ORTHO05D007721 2.3e-73 279.6 226 64.6
Sabra03G0161800 Salix brachista HOM05D006328 ORTHO05D007721 2.3e-73 279.6 279 55.9
TWI60G0846 Tripterygium wilfordii HOM05D006328 ORTHO05D007721 2.3e-73 279.6 187 72.2
BraA09t36060Z Brassica rapa HOM05D006328 ORTHO05D007721 3.0e-73 279.3 228 62.3
A09p04230 Brassica napus HOM05D006328 ORTHO05D007721 3.9e-73 278.9 227 62.6
AUR62019196 Chenopodium quinoa HOM05D006328 ORTHO05D007721 3.9e-73 278.9 190 73.7
CsaV3_1G042230 Cucumis sativus L. HOM05D006328 ORTHO05D007721 6.6e-73 278.1 191 71.7
Migut.D02532 Erythranthe guttata HOM05D006328 ORTHO05D007721 6.6e-73 278.1 182 73.6
Thhalv10004835m.g Eutrema salsugineum HOM05D006328 ORTHO05D007721 8.7e-73 277.7 200 69.0
Duzib150G1371 Durio zibethinus HOM05D006328 ORTHO05D007721 1.1e-72 277.3 252 60.3
FAN25G2838 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.1e-72 277.3 212 67.5
Lj6g0000665 Lotus japonicus HOM05D006328 ORTHO05D007721 1.5e-72 276.9 201 68.7
Prupe.1G537200 Prunus persica HOM05D006328 ORTHO05D007721 1.9e-72 276.6 202 69.3
Hund07572 Selenicereus undatus HOM05D006328 ORTHO05D007721 1.9e-72 276.6 256 59.4
FAN21G0799 Fragaria x ananassa HOM05D006328 ORTHO05D007721 2.5e-72 276.2 275 57.5
Glyma.18G097300 Glycine max HOM05D006328 ORTHO05D007721 1.2e-71 273.9 241 60.6
Actinidia06854 Actinidia chinensis HOM05D001240 ORTHO05D002450 2.1e-71 273.1 195 70.3
TPR.G19330 Trifolium pratense HOM05D006328 ORTHO05D007721 2.1e-71 273.1 232 61.2
arahy.Tifrunner.gnm1.ann1.6HD85A Arachis hypogaea HOM05D006328 ORTHO05D007721 2.8e-71 272.7 253 58.9
DCAR_001992 Daucus carota HOM05D006328 ORTHO05D007721 5.2e-70 268.5 212 65.6
Medtr3g083310 Medicago truncatula HOM05D006328 ORTHO05D007721 1.2e-69 267.3 197 67.0
Rhsim13G0229700 Rhododendron simsii HOM05D006328 ORTHO05D007721 4.4e-69 265.4 228 59.6
Ah.06g193050 Amaranthus hybridus HOM05D001193 ORTHO05D007721 4.9e-68 261.9 251 56.6
Manes.15G105600 Manihot esculenta HOM05D006328 ORTHO05D007721 8.4e-68 261.2 252 58.7
AUR62000025 Chenopodium quinoa HOM05D006328 ORTHO05D007721 1.4e-67 260.4 175 74.9
Os07g0608100 Oryza sativa ssp. japonica HOM05D006328 ORTHO05D007721 2.1e-66 256.5 189 67.7
Zm00001eb108920 Zea mays HOM05D006328 ORTHO05D007721 1.9e-64 250.0 190 65.8
vmacro04215 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 1.6e-58 230.3 180 64.4
Hma1.2p1_0062F.1_g034180 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 2.1e-58 229.9 141 78.0
VMungo0540G0449 Vigna mungo HOM05D006328 ORTHO05D007721 1.4e-54 217.2 122 84.4
Mapoly0048s0070 Marchantia polymorpha HOM05D006328 ORTHO05D007721 1.8e-49 200.3 196 54.6
Psat5g101200 Pisum sativum HOM05D006328 ORTHO05D007721 5.1e-49 198.7 146 67.8
AagrBONN_evm.TU.Sc2ySwM_344.1649 Anthoceros agrestis HOM05D006328 ORTHO05D007721 1.1e-46 191.0 186 55.9
Pp3c11_23310 Physcomitrium patens HOM05D006328 ORTHO05D007721 6.5e-44 181.8 182 52.2
vmacro22566 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 2.5e-40 169.9 105 79.0
Sc06g0004300 Simmondsia chinensis HOM05D006328 ORTHO05D007721 3.3e-40 169.5 141 62.4
CBR_g50072 Chara braunii HOM05D006328 ORTHO05D007721 4.1e-38 162.5 140 57.1
CDE07G1106 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 1.5e-37 160.6 185 47.0
CSS0049555 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 1.1e-30 137.9 107 66.4
CSS0028438 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 3.4e-29 132.9 106 65.1
Duzib168G1709 Durio zibethinus HOM05D006328 ORTHO05D007721 3.4e-29 132.9 200 42.5
Nn2g15765 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.0e-28 131.3 72 84.7
HanXRQChr04g0113321 Helianthus annuus HOM05D006328 ORTHO05D007721 2.8e-23 113.2 61 83.6
Nn2g15764 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.1e-19 101.3 81 67.9
HanXRQChr17g0560491 Helianthus annuus HOM05D006328 ORTHO05D007721 2.0e-16 90.5 57 77.2
unitig_899.g15354 Utricularia gibba HOM05D006328 ORTHO05D007721 9.7e-16 88.2 77 55.8
Dinv15017 Davidia involucrata HOM05D006328 ORTHO05D007721 1.2e-13 81.3 127 39.4
arahy.Tifrunner.gnm1.ann1.VB18ZC Arachis hypogaea HOM05D006328 ORTHO05D007721 2.9e-12 76.6 127 39.4
VMungo0540G1370 Vigna mungo HOM05D006328 ORTHO05D007721 1.5e-11 74.3 132 34.1
Sabra06G0010000 Salix brachista HOM05D006328 ORTHO05D007721 2.3e-09 67.0 105 41.9
arahy.Tifrunner.gnm1.ann1.C5G03I Arachis hypogaea HOM05D006328 ORTHO05D007721 5.2e-09 65.9 74 50.0
Zm00001eb327220 Zea mays HOM05D006328 ORTHO05D007721 5.2e-09 65.9 65 50.8
Hma1.2p1_0062F.1_g034160 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 1.3e-07 61.2 111 37.8


User provided reference genes

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