Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 2.5e-150 535.4 269 100.0
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 3.4e-139 498.4 270 93.7
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 5.6e-102 374.8 267 72.7
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 4.8e-101 371.7 266 71.1
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 1.3e-98 363.6 266 69.5
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 1.6e-96 356.7 243 72.4
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 3.5e-96 355.5 239 74.5
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 4.6e-96 355.1 267 67.8
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 7.9e-96 354.4 265 68.3
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 7.9e-96 354.4 234 72.6
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 1.8e-95 353.2 264 67.8
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.8e-95 353.2 264 67.8
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.8e-95 353.2 265 68.7
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 3.0e-95 352.4 263 68.1
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 3.0e-95 352.4 267 70.0
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 3.9e-95 352.1 267 67.4
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.9e-95 352.1 267 67.0
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 5.1e-95 351.7 265 68.7
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 5.1e-95 351.7 263 67.3
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 8.7e-95 350.9 265 67.2
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 1.1e-94 350.5 243 72.8
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 1.5e-94 350.1 268 67.5
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 1.5e-94 350.1 268 66.0
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 1.5e-94 350.1 238 73.9
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 3.3e-94 349.0 266 68.0
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.3e-94 349.0 264 67.0
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 4.3e-94 348.6 239 74.5
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 9.6e-94 347.4 263 66.5
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.3e-93 347.1 240 72.5
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 1.6e-93 346.7 267 67.4
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 2.1e-93 346.3 266 65.8
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 2.8e-93 345.9 268 66.0
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 8.1e-93 344.4 235 71.5
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 8.1e-93 344.4 269 66.5
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 1.1e-92 344.0 271 64.9
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 1.1e-92 344.0 241 69.7
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 2.4e-92 342.8 240 70.4
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 4.0e-92 342.0 225 75.1
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 5.3e-92 341.7 257 65.4
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 9.0e-92 340.9 241 71.0
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 1.2e-91 340.5 270 65.2
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 1.5e-91 340.1 240 70.4
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 1.5e-91 340.1 259 66.0
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 2.0e-91 339.7 267 64.4
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 2.0e-91 339.7 265 65.7
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 2.0e-91 339.7 266 64.7
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 2.6e-91 339.3 269 63.9
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 3.4e-91 339.0 241 70.5
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 5.8e-91 338.2 264 65.2
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 5.8e-91 338.2 240 70.0
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 5.8e-91 338.2 267 64.8
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 5.8e-91 338.2 241 70.1
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 9.9e-91 337.4 242 69.0
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 1.3e-90 337.0 241 69.7
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 1.7e-90 336.7 244 70.1
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 1.7e-90 336.7 234 70.5
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 2.2e-90 336.3 268 65.7
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 3.8e-90 335.5 242 69.0
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 6.4e-90 334.7 242 69.8
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 8.4e-90 334.3 242 69.0
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 8.4e-90 334.3 241 70.5
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 8.4e-90 334.3 234 69.7
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 1.1e-89 334.0 242 69.0
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 1.1e-89 334.0 242 69.8
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.9e-89 333.2 251 68.1
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.9e-89 333.2 265 63.4
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 2.4e-89 332.8 267 65.2
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 5.5e-89 331.6 241 68.5
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 5.5e-89 331.6 271 63.5
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 5.5e-89 331.6 271 63.8
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.6e-88 330.1 242 68.6
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 2.1e-88 329.7 259 62.2
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 2.7e-88 329.3 246 67.5
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 2.7e-88 329.3 246 67.5
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 3.5e-88 328.9 269 63.2
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 4.6e-88 328.6 262 65.3
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 4.6e-88 328.6 267 64.8
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 7.9e-88 327.8 236 69.5
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.3e-87 327.0 242 67.4
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 3.9e-87 325.5 270 62.2
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 5.1e-87 325.1 237 67.9
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 1.1e-86 323.9 263 63.5
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 4.3e-86 322.0 243 66.3
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 6.2e-85 318.2 250 64.8
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 8.1e-85 317.8 236 65.3
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 3.1e-84 315.8 232 69.0
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 4.0e-84 315.5 336 51.8
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 1.5e-83 313.5 279 58.8
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 2.0e-83 313.2 214 72.4
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 5.8e-83 311.6 213 72.3
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 1.3e-82 310.5 234 65.0
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 2.9e-82 309.3 216 70.8
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.9e-81 306.6 203 73.4
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.9e-81 306.6 333 51.1
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 2.1e-80 303.1 213 72.3
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 1.8e-79 300.1 216 69.4
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 3.9e-79 298.9 204 72.5
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 2.5e-78 296.2 216 67.6
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 9.6e-78 294.3 214 67.3
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 4.1e-76 288.9 224 65.2
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 1.1e-70 270.8 204 64.7
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 1.0e-66 257.7 229 59.0
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 7.9e-64 248.1 245 52.7
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 6.7e-63 245.0 343 45.2
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 8.8e-63 244.6 238 52.5
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 1.1e-62 244.2 171 74.3
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 2.4e-60 236.5 180 67.8
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 2.0e-54 216.9 235 50.6
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 4.8e-53 212.2 140 68.6
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 5.5e-49 198.7 242 45.5
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 1.3e-45 187.6 139 70.5
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 4.8e-45 185.7 140 65.7
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 3.8e-42 176.0 158 60.8
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 1.1e-41 174.5 158 59.5
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 1.9e-41 173.7 158 60.1
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.8e-37 159.8 124 62.1
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 1.2e-35 154.5 120 69.2
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 7.7e-35 151.8 177 48.6
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 3.8e-34 149.4 96 74.0
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 2.5e-33 146.7 121 64.5
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 2.0e-30 137.1 95 70.5
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 1.4e-28 131.0 95 67.4
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 2.6e-22 110.2 75 65.3
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.0e-18 98.2 105 52.4
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 3.4e-14 83.2 178 32.6
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 3.7e-13 79.7 47 72.3
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 1.2e-08 64.7 116 39.7
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 4.7e-08 62.8 116 39.7


User provided reference genes

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