Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4442 Papaver somniferum HOM05D000916 ORTHO05D003833 1.8e-93 345.9 171 100.0
PSO339G1599 Papaver somniferum HOM05D000916 ORTHO05D003833 2.8e-38 162.5 81 92.6
ClCG09G004480 Citrullus lanatus HOM05D000916 ORTHO05D003833 4.2e-26 122.1 81 71.6
PGR031G0424 Punica granatum HOM05D000916 ORTHO05D003833 5.4e-26 121.7 81 71.6
Sed0027440 Sechium edule HOM05D000916 ORTHO05D003833 5.4e-26 121.7 81 71.6
CDE08G0464 Ceratophyllum demersum HOM05D000916 ORTHO05D003833 1.6e-25 120.2 81 70.4
CsaV3_7G030660 Cucumis sativus L. HOM05D000916 ORTHO05D003833 2.7e-25 119.4 81 70.4
CiPaw.14G004400 Carya illinoinensis HOM05D000916 ORTHO05D003833 3.5e-25 119.0 81 69.1
CDE09G0790 Ceratophyllum demersum HOM05D000916 ORTHO05D003833 4.6e-25 118.6 81 69.1
COL.COLO4_12325 Corchorus olitorius HOM05D000916 ORTHO05D003833 4.6e-25 118.6 81 70.4
DCAR_031814 Daucus carota HOM05D000916 ORTHO05D003833 4.6e-25 118.6 88 63.6
Duzib138G1830 Durio zibethinus HOM05D000916 ORTHO05D003833 4.6e-25 118.6 81 70.4
Lj3g0008484 Lotus japonicus HOM05D000916 ORTHO05D003833 4.6e-25 118.6 81 69.1
Phvul.005G035700 Phaseolus vulgaris HOM05D000916 ORTHO05D003833 4.6e-25 118.6 81 71.6
Aqoxy2G00215 Aquilegia oxysepala HOM05D000916 ORTHO05D003833 6.0e-25 118.2 81 70.4
MELO3C023590.2 Cucumis melo HOM05D000916 ORTHO05D003833 6.0e-25 118.2 81 69.1
TWI73G1133 Tripterygium wilfordii HOM05D000916 ORTHO05D003833 6.0e-25 118.2 80 71.2
Actinidia21532 Actinidia chinensis HOM05D000916 ORTHO05D003833 7.9e-25 117.9 81 67.9
Rhsim01G0124600 Rhododendron simsii HOM05D000916 ORTHO05D003833 1.3e-24 117.1 81 64.2
Atru.chr11.2554 Acer truncatum HOM05D000916 ORTHO05D003833 1.8e-24 116.7 81 67.9
Ciclev10031731m.g Citrus clementina HOM05D000916 ORTHO05D003833 1.8e-24 116.7 81 64.2
Oeu014600.1 Olea europaea HOM05D000916 ORTHO05D003833 1.8e-24 116.7 80 66.2
VMungo1080G0664 Vigna mungo HOM05D000916 ORTHO05D003833 1.8e-24 116.7 81 71.6
CSS0019872 Camellia sinensis var. sinensis HOM05D000916 ORTHO05D003833 3.9e-24 115.5 81 67.9
CARHR199640 Cardamine hirsuta HOM05D000916 ORTHO05D003833 3.9e-24 115.5 81 65.4
Potri.009G054800 Populus trichocarpa HOM05D000916 ORTHO05D003833 3.9e-24 115.5 81 67.9
AT5G13800 Arabidopsis thaliana HOM05D000916 ORTHO05D003833 5.1e-24 115.2 81 65.4
CANSAT80G0128 Cannabis sativa HOM05D000916 ORTHO05D003833 5.1e-24 115.2 81 67.9
Carub.0006s1198 Capsella rubella HOM05D000916 ORTHO05D003833 5.1e-24 115.2 81 64.2
Gohir.A08G141100 Gossypium hirsutum HOM05D000916 ORTHO05D003833 5.1e-24 115.2 81 66.7
Gohir.D08G162200 Gossypium hirsutum HOM05D000916 ORTHO05D003833 5.1e-24 115.2 81 66.7
Gorai.004G168500 Gossypium raimondii HOM05D000916 ORTHO05D003833 5.1e-24 115.2 81 66.7
Sc11g0008990 Simmondsia chinensis HOM05D000916 ORTHO05D003833 5.1e-24 115.2 81 69.1
Thecc.01G403500 Theobroma cacao HOM05D000916 ORTHO05D003833 5.1e-24 115.2 81 67.9
TPR.G975 Trifolium pratense HOM05D000916 ORTHO05D003833 5.1e-24 115.2 81 70.4
EL10Ac2g04388 Beta vulgaris HOM05D000916 ORTHO05D003833 6.7e-24 114.8 81 65.4
Gohir.D12G102900 Gossypium hirsutum HOM05D000916 ORTHO05D003833 6.7e-24 114.8 81 64.2
Gorai.008G112100 Gossypium raimondii HOM05D000916 ORTHO05D003833 6.7e-24 114.8 81 64.2
Medtr3g034670 Medicago truncatula HOM05D000916 ORTHO05D003833 6.7e-24 114.8 81 69.1
Nn2g15162 Nelumbo nucifera HOM05D000916 ORTHO05D003833 8.7e-24 114.4 81 65.4
Actinidia20653 Actinidia chinensis HOM05D000916 ORTHO05D003833 1.1e-23 114.0 81 65.4
Sabra16G0159200 Salix brachista HOM05D000916 ORTHO05D003833 1.1e-23 114.0 81 63.0
vmacro21144 Vaccinium macrocarpon HOM05D000916 ORTHO05D003833 1.1e-23 114.0 81 64.2
Ca_14192_v3 Cicer arietinum L. HOM05D000916 ORTHO05D003833 1.5e-23 113.6 81 69.1
Lj9A642T54 Lonicera japonica HOM05D000916 ORTHO05D003833 1.5e-23 113.6 81 65.4
Psat5g211600 Pisum sativum HOM05D000916 ORTHO05D003833 1.9e-23 113.2 81 67.9
TAR633G0084 Trochodendron aralioides HOM05D000916 ORTHO05D003833 1.9e-23 113.2 81 67.9
Haze_03096 Corylus avellana HOM05D000916 ORTHO05D003833 2.5e-23 112.8 81 69.1
AL6G24420 Arabidopsis lyrata HOM05D000916 ORTHO05D003833 3.3e-23 112.5 81 63.0
QL04p010554 Quercus lobata HOM05D000916 ORTHO05D003833 3.3e-23 112.5 81 66.7
Cc04_g14700 Coffea canephora HOM05D000916 ORTHO05D003833 4.3e-23 112.1 81 61.7
Duzib133G0052 Durio zibethinus HOM05D000916 ORTHO05D003833 4.3e-23 112.1 81 67.9
Thhalv10013390m.g Eutrema salsugineum HOM05D000916 ORTHO05D003833 4.3e-23 112.1 81 61.7
Hma1.2p1_0269F.1_g107780 Hydrangea macrophylla HOM05D000916 ORTHO05D003833 4.3e-23 112.1 83 63.9
GSVIVG01001445001 Vitis vinifera HOM05D000916 ORTHO05D003833 4.3e-23 112.1 81 64.2
Cpa.g.sc197.25 Carica papaya HOM05D000916 ORTHO05D003833 5.6e-23 111.7 81 63.0
Nn7g36359 Nelumbo nucifera HOM05D000916 ORTHO05D003833 5.6e-23 111.7 81 64.2
C03p07190 Brassica napus HOM05D000916 ORTHO05D003833 7.4e-23 111.3 81 61.7
BolC3t13220H Brassica oleracea HOM05D000916 ORTHO05D003833 7.4e-23 111.3 81 61.7
Dinv43398 Davidia involucrata HOM05D000916 ORTHO05D003833 7.4e-23 111.3 81 66.7
Eucgr.G03276 Eucalyptus grandis HOM05D000916 ORTHO05D003833 7.4e-23 111.3 81 64.2
SGA_v2.0_scaffold119G32770 Striga asiatica HOM05D000916 ORTHO05D003833 7.4e-23 111.3 81 63.0
THA.LOC104827431 Tarenaya hassleriana HOM05D000916 ORTHO05D003833 7.4e-23 111.3 80 63.8
ATR0320G046 Amborella trichopoda HOM05D000916 ORTHO05D003833 9.6e-23 110.9 81 63.0
AUR62009433 Chenopodium quinoa HOM05D000916 ORTHO05D003833 1.6e-22 110.2 81 67.9
HPP92_011273 Vanilla planifolia HOM05D000916 ORTHO05D003833 1.6e-22 110.2 81 64.2
HPP92_011294 Vanilla planifolia HOM05D000916 ORTHO05D003833 1.6e-22 110.2 81 64.2
AUR62023112 Chenopodium quinoa HOM05D000916 ORTHO05D003833 2.1e-22 109.8 81 67.9
Glyma.11G157976 Glycine max HOM05D000916 ORTHO05D003833 2.1e-22 109.8 82 67.1
Sp6g30220 Schrenkiella parvula HOM05D000916 ORTHO05D003833 2.1e-22 109.8 81 60.5
THA.LOC104819108 Tarenaya hassleriana HOM05D000916 ORTHO05D003833 2.1e-22 109.8 82 64.6
BcaB01g05336 Brassica carinata HOM05D000916 ORTHO05D003833 2.8e-22 109.4 81 60.5
BraA03t09952Z Brassica rapa HOM05D000916 ORTHO05D003833 2.8e-22 109.4 82 61.0
Glyma.09G226000 Glycine max HOM05D000916 ORTHO05D003833 2.8e-22 109.4 81 66.7
Lsat_1_v5_gn_1_100221 Lactuca sativa HOM05D000916 ORTHO05D003833 2.8e-22 109.4 81 65.4
Hund02666 Selenicereus undatus HOM05D000916 ORTHO05D003833 2.8e-22 109.4 81 64.2
Sabra09G0040100 Salix brachista HOM05D000916 ORTHO05D003833 3.7e-22 109.0 81 65.4
MSTRG.17001 Avicennia marina HOM05D000916 ORTHO05D003833 4.8e-22 108.6 80 62.5
RcHm_v2.0_Chr1g0318891 Rosa chinensis HOM05D000916 ORTHO05D003833 4.8e-22 108.6 81 58.0
MSTRG.5048 Avicennia marina HOM05D000916 ORTHO05D003833 6.2e-22 108.2 80 63.8
FvH4_7g01940 Fragaria vesca HOM05D000916 ORTHO05D003833 6.2e-22 108.2 81 58.0
FAN06G1297 Fragaria x ananassa HOM05D000916 ORTHO05D003833 6.2e-22 108.2 81 58.0
Glyma.12G010600 Glycine max HOM05D000916 ORTHO05D003833 6.2e-22 108.2 81 65.4
A02p02190 Brassica napus HOM05D000916 ORTHO05D003833 8.1e-22 107.8 81 60.5
FAN01G1598 Fragaria x ananassa HOM05D000916 ORTHO05D003833 8.1e-22 107.8 81 58.0
Phvul.011G013400 Phaseolus vulgaris HOM05D000916 ORTHO05D003833 8.1e-22 107.8 81 65.4
VMungo1127G2227 Vigna mungo HOM05D000916 ORTHO05D003833 8.1e-22 107.8 81 63.0
A03p06180 Brassica napus HOM05D000916 ORTHO05D003833 1.1e-21 107.5 81 58.0
RcHm_v2.0_Chr1g0318661 Rosa chinensis HOM05D000916 ORTHO05D003833 1.1e-21 107.5 81 56.8
FAN03G0804 Fragaria x ananassa HOM05D000916 ORTHO05D003833 1.4e-21 107.1 81 58.0
FAN03G2955 Fragaria x ananassa HOM05D000916 ORTHO05D003833 1.4e-21 107.1 81 58.0
MD07G1025100 Malus domestica HOM05D000916 ORTHO05D003833 1.4e-21 107.1 81 64.2
arahy.Tifrunner.gnm1.ann1.S8KRYV Arachis hypogaea HOM05D000916 ORTHO05D003833 1.8e-21 106.7 81 63.0
arahy.Tifrunner.gnm1.ann1.YN40WG Arachis hypogaea HOM05D000916 ORTHO05D003833 1.8e-21 106.7 81 63.0
CAN.G410.9 Capsicum annuum HOM05D000916 ORTHO05D003833 1.8e-21 106.7 81 58.0
Lalb_Chr04g0263761 Lupinus albus HOM05D000916 ORTHO05D003833 1.8e-21 106.7 81 60.5
Peaxi162Scf01108g00012 Petunia axillaris HOM05D000916 ORTHO05D003833 1.8e-21 106.7 81 59.3
Migut.N01808 Erythranthe guttata HOM05D000916 ORTHO05D003833 2.4e-21 106.3 81 60.5
unitig_0.g979 Utricularia gibba HOM05D000916 ORTHO05D003833 2.4e-21 106.3 80 57.5
MD02G1299000 Malus domestica HOM05D000916 ORTHO05D003833 4.0e-21 105.5 81 63.0
Nitab4.5_0002187g0050 Nicotiana tabacum HOM05D000916 ORTHO05D003833 4.0e-21 105.5 81 60.5
Nitab4.5_0006695g0060 Nicotiana tabacum HOM05D000916 ORTHO05D003833 5.3e-21 105.1 81 60.5
Prupe.2G025100 Prunus persica HOM05D000916 ORTHO05D003833 5.3e-21 105.1 81 63.0
BcaNung04182 Brassica carinata HOM05D000916 ORTHO05D003833 9.0e-21 104.4 81 59.3
CiPaw.13G008700 Carya illinoinensis HOM05D000916 ORTHO05D003833 1.2e-20 104.0 81 61.7
Zm00001eb231810 Zea mays HOM05D000916 ORTHO05D003833 1.2e-20 104.0 81 58.0
Migut.B01255 Erythranthe guttata HOM05D000916 ORTHO05D003833 1.5e-20 103.6 80 63.8
Peaxi162Scf00071g00942 Petunia axillaris HOM05D000916 ORTHO05D003833 1.5e-20 103.6 81 59.3
ECA248G0906 Erigeron canadensis HOM05D000916 ORTHO05D003833 2.0e-20 103.2 81 59.3
Haze_03117 Corylus avellana HOM05D000916 ORTHO05D003833 2.6e-20 102.8 80 62.5
Sopen01g034960 Solanum pennellii HOM05D000916 ORTHO05D003833 2.6e-20 102.8 81 56.8
Aa31LG2G15250 Aethionema arabicum HOM05D000916 ORTHO05D003833 3.4e-20 102.4 81 58.0
Nitab4.5_0008059g0020 Nicotiana tabacum HOM05D000916 ORTHO05D003833 4.5e-20 102.1 81 58.0
Os06g0354700 Oryza sativa ssp. japonica HOM05D000916 ORTHO05D003833 4.5e-20 102.1 81 55.6
SalBow5G3829 Salvia bowleyana HOM05D000916 ORTHO05D003833 4.5e-20 102.1 81 59.3
HanXRQChr05g0159011 Helianthus annuus HOM05D000916 ORTHO05D003833 5.8e-20 101.7 81 60.5
unitig_61.g26130 Utricularia gibba HOM05D000916 ORTHO05D003833 5.8e-20 101.7 80 57.5
BraA02t05192Z Brassica rapa HOM05D000916 ORTHO05D003833 1.0e-19 100.9 82 56.1
Nitab4.5_0000087g0130 Nicotiana tabacum HOM05D000916 ORTHO05D003833 1.0e-19 100.9 81 56.8
Solyc01g088090.3 Solanum lycopersicum HOM05D000916 ORTHO05D003833 1.3e-19 100.5 81 55.6
PGSC0003DMG400006768 Solanum tuberosum HOM05D000916 ORTHO05D003833 2.2e-19 99.8 81 55.6
arahy.Tifrunner.gnm1.ann1.Y4Z44P Arachis hypogaea HOM05D000916 ORTHO05D003833 2.9e-19 99.4 81 61.7
C02p06440 Brassica napus HOM05D000916 ORTHO05D003833 3.8e-19 99.0 81 56.8
BolC2t06590H Brassica oleracea HOM05D000916 ORTHO05D003833 3.8e-19 99.0 81 56.8
Pp3c25_9360 Physcomitrium patens HOM05D000916 ORTHO05D003833 5.5e-18 95.1 88 53.4
Haze_11740 Corylus avellana HOM05D000916 ORTHO05D003833 1.5e-15 87.0 81 55.6
Gohir.A12G100000 Gossypium hirsutum HOM05D000916 ORTHO05D003833 1.2e-09 67.4 81 42.0
Cre16.g664350 Chlamydomonas reinhardtii HOM05D000916 ORTHO05D007921 6.3e-06 55.1 38 63.2
Cre12.g514700 Chlamydomonas reinhardtii HOM05D000916 ORTHO05D003833 8.2e-06 54.7 54 44.4


User provided reference genes

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