Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4348 Papaver somniferum HOM05D031134 ORTHO05D302392 1.6e-180 636.0 321 100.0
PSO339G1828 Papaver somniferum HOM05D031134 ORTHO05D301998 2.1e-180 635.6 321 99.7
PSO339G5906 Papaver somniferum HOM05D031134 ORTHO05D302295 2.1e-180 635.6 321 99.7
PSO339G5088 Papaver somniferum HOM05D031134 ORTHO05D303910 6.1e-71 271.9 266 58.3
PSO339G1217 Papaver somniferum HOM05D004873 ORTHO05D006122 1.1e-16 91.7 60 73.3
PGR102G2017 Punica granatum HOM05D004873 ORTHO05D006122 6.9e-14 82.4 229 30.6
TAR622G0484 Trochodendron aralioides HOM05D004873 ORTHO05D006122 9.0e-14 82.0 188 33.5
Manes.13G031000 Manihot esculenta HOM05D004873 ORTHO05D006122 2.0e-13 80.9 258 32.2
ClCG05G025280 Citrullus lanatus HOM05D004873 ORTHO05D006122 5.8e-13 79.3 230 29.1
Duzib248G0479 Durio zibethinus HOM05D004873 ORTHO05D006122 9.9e-13 78.6 259 27.4
Cfa009139 Carpinus fangiana HOM05D004873 ORTHO05D006122 2.2e-12 77.4 189 31.2
GSVIVG01020233001 Vitis vinifera HOM05D004873 ORTHO05D006122 2.2e-12 77.4 191 33.0
Atru.chr11.2013 Acer truncatum HOM05D004873 ORTHO05D006122 2.9e-12 77.0 214 31.3
MELO3C012001.2 Cucumis melo HOM05D004873 ORTHO05D006122 2.9e-12 77.0 230 28.3
Potri.008G147100 Populus trichocarpa HOM05D004873 ORTHO05D006122 3.8e-12 76.6 193 32.1
MBI15_g36943_MAGBIO Magnolia biondii HOM05D004873 ORTHO05D006122 4.9e-12 76.3 196 29.1
Dinv15307 Davidia involucrata HOM05D004873 ORTHO05D006122 6.4e-12 75.9 222 30.2
Nn4g22808 Nelumbo nucifera HOM05D004873 ORTHO05D006122 6.4e-12 75.9 200 31.0
Hma1.2p1_0867F.1_g230230 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 8.4e-12 75.5 219 28.3
Potri.010G094700 Populus trichocarpa HOM05D004873 ORTHO05D006122 8.4e-12 75.5 204 30.4
Lj6A805G39 Lonicera japonica HOM05D004873 ORTHO05D006122 1.9e-11 74.3 192 31.8
Sabra10G0067000 Salix brachista HOM05D004873 ORTHO05D006122 1.9e-11 74.3 204 30.4
TWI18G0605 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 3.2e-11 73.6 189 29.1
Haze_12170 Corylus avellana HOM05D004873 ORTHO05D006122 5.4e-11 72.8 195 29.7
QL03p061438 Quercus lobata HOM05D004873 ORTHO05D006122 5.4e-11 72.8 191 29.8
TWI75G0297 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 5.4e-11 72.8 189 29.1
CSS0025142 Camellia sinensis var. sinensis HOM05D004873 ORTHO05D006122 7.1e-11 72.4 182 29.7
CiPaw.05G150500 Carya illinoinensis HOM05D004873 ORTHO05D006122 7.1e-11 72.4 191 30.4
Duzib251G0436 Durio zibethinus HOM05D004873 ORTHO05D006122 1.2e-10 71.6 199 29.1
Eucgr.B03347 Eucalyptus grandis HOM05D004873 ORTHO05D006122 1.2e-10 71.6 188 29.3
Actinidia01706 Actinidia chinensis HOM05D004873 ORTHO05D006122 1.6e-10 71.2 200 29.0
CsaV3_5G031610 Cucumis sativus L. HOM05D004873 ORTHO05D006122 1.6e-10 71.2 240 28.8
Ciclev10030647m.g Citrus clementina HOM05D004873 ORTHO05D006122 2.1e-10 70.9 192 29.7
Dinv24864 Davidia involucrata HOM05D004873 ORTHO05D006122 3.5e-10 70.1 200 28.5
MD16G1091700 Malus domestica HOM05D004873 ORTHO05D006122 6.0e-10 69.3 233 27.0
PSO063G1237 Papaver somniferum HOM05D004873 ORTHO05D006122 6.0e-10 69.3 191 29.8
Sed0006362 Sechium edule HOM05D004873 ORTHO05D006122 6.0e-10 69.3 307 26.4
Aqoxy3G02990_Aqoxy3G02991 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 1.8e-09 67.8 187 27.8
TAR374G0217 Trochodendron aralioides HOM05D004873 ORTHO05D006122 1.8e-09 67.8 213 28.2
CDE01G0488 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 2.3e-09 67.4 184 29.9
ATR0691G293 Amborella trichopoda HOM05D004873 ORTHO05D006122 3.0e-09 67.0 191 30.4
Gohir.D02G163000 Gossypium hirsutum HOM05D004873 ORTHO05D006122 3.0e-09 67.0 260 26.9
Gorai.005G183000 Gossypium raimondii HOM05D004873 ORTHO05D006122 3.0e-09 67.0 260 26.9
DCAR_026543 Daucus carota HOM05D004873 ORTHO05D006122 3.9e-09 66.6 197 29.4
TWI36G0907 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 5.1e-09 66.2 224 26.3
Ca_04600_v3 Cicer arietinum L. HOM05D004873 ORTHO05D006122 6.7e-09 65.9 198 27.8
Zm00001eb042420 Zea mays HOM05D004873 ORTHO05D006122 6.7e-09 65.9 236 28.0
Psat2g106600 Pisum sativum HOM05D004873 ORTHO05D006122 8.7e-09 65.5 190 26.8
HPP92_019184 Vanilla planifolia HOM05D004873 ORTHO05D006122 8.7e-09 65.5 196 27.6
PGSC0003DMG400030977 Solanum tuberosum HOM05D004873 ORTHO05D006122 1.1e-08 65.1 192 30.2
CANSAT01G1467 Cannabis sativa HOM05D004873 ORTHO05D006122 1.9e-08 64.3 292 26.0
Migut.L01408 Erythranthe guttata HOM05D004873 ORTHO05D006122 1.9e-08 64.3 189 25.4
Lalb_Chr05g0228131 Lupinus albus HOM05D004873 ORTHO05D006122 1.9e-08 64.3 201 28.4
CAN.G376.10 Capsicum annuum HOM05D004873 ORTHO05D006122 2.5e-08 63.9 192 30.2
COL.COLO4_36971 Corchorus olitorius HOM05D004873 ORTHO05D006122 3.3e-08 63.5 191 28.3
Glyma.01G031400 Glycine max HOM05D004873 ORTHO05D006122 3.3e-08 63.5 190 28.4
Nitab4.5_0000113g0270 Nicotiana tabacum HOM05D004873 ORTHO05D006122 3.3e-08 63.5 197 29.4
Gohir.A03G140300 Gossypium hirsutum HOM05D004873 ORTHO05D006122 4.3e-08 63.2 268 26.5
Prupe.1G254700 Prunus persica HOM05D004873 ORTHO05D006122 4.3e-08 63.2 200 26.5
Sopen05g001620 Solanum pennellii HOM05D004873 ORTHO05D006122 4.3e-08 63.2 193 29.0
Cc11_g14610 Coffea canephora HOM05D004873 ORTHO05D006122 5.6e-08 62.8 191 28.8
vmacro01183 Vaccinium macrocarpon HOM05D004873 ORTHO05D006122 5.6e-08 62.8 195 28.7
DCAR_024143 Daucus carota HOM05D004873 ORTHO05D006122 9.6e-08 62.0 190 26.8
Nitab4.5_0010954g0010 Nicotiana tabacum HOM05D004873 ORTHO05D006122 9.6e-08 62.0 197 28.9
Sc11g0001220 Simmondsia chinensis HOM05D004873 ORTHO05D006122 9.6e-08 62.0 74 43.2
Hma1.2p1_0160F.1_g070740 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 1.6e-07 61.2 206 28.2
HPP92_019185 Vanilla planifolia HOM05D004873 ORTHO05D006122 1.6e-07 61.2 153 30.1
Medtr5g034430 Medicago truncatula HOM05D004873 ORTHO05D006122 2.1e-07 60.8 190 25.3
Cpa.g.sc69.19 Carica papaya HOM05D004873 ORTHO05D006122 2.8e-07 60.5 264 26.1
ECA199G0004 Erigeron canadensis HOM05D004873 ORTHO05D006122 3.7e-07 60.1 191 29.3
Glyma.02G034300 Glycine max HOM05D004873 ORTHO05D006122 3.7e-07 60.1 225 24.4
MD13G1091200 Malus domestica HOM05D004873 ORTHO05D006122 3.7e-07 60.1 300 23.3
CARHR052750 Cardamine hirsuta HOM05D004873 ORTHO05D006122 4.8e-07 59.7 205 26.3
Phvul.002G071900 Phaseolus vulgaris HOM05D004873 ORTHO05D006122 4.8e-07 59.7 237 24.1
arahy.Tifrunner.gnm1.ann1.SJZ9IC Arachis hypogaea HOM05D004873 ORTHO05D006122 6.2e-07 59.3 78 38.5
Lsat_1_v5_gn_4_6981 Lactuca sativa HOM05D004873 ORTHO05D006122 6.2e-07 59.3 190 28.4
Oeu055452.2 Olea europaea HOM05D004873 ORTHO05D006122 8.1e-07 58.9 260 25.0
Solyc05g005620.4 Solanum lycopersicum HOM05D004873 ORTHO05D006122 8.1e-07 58.9 153 30.1
VMungo1215G2983 Vigna mungo HOM05D004873 ORTHO05D006122 8.1e-07 58.9 78 38.5
AL2G16455 Arabidopsis lyrata HOM05D004873 ORTHO05D006122 1.1e-06 58.5 207 26.6
Peaxi162Scf00338g00218 Petunia axillaris HOM05D004873 ORTHO05D006122 1.1e-06 58.5 237 26.2
Rhsim12G0047400 Rhododendron simsii HOM05D004873 ORTHO05D006122 1.1e-06 58.5 196 28.6
AT1G60200 Arabidopsis thaliana HOM05D004873 ORTHO05D006122 1.8e-06 57.8 212 26.9
FAN07G2437 Fragaria x ananassa HOM05D004873 ORTHO05D006122 3.1e-06 57.0 264 24.6
FAN22G1569 Fragaria x ananassa HOM05D004873 ORTHO05D006122 3.1e-06 57.0 77 37.7
CDE02G2297 Ceratophyllum demersum HOM05D001801 ORTHO05D001739 4.0e-06 56.6 66 43.9
Lalb_Chr16g0392411 Lupinus albus HOM05D004873 ORTHO05D006122 4.0e-06 56.6 66 43.9
MSTRG.7893 Avicennia marina HOM05D004873 ORTHO05D006122 5.3e-06 56.2 189 23.8
PSO832G2005 Papaver somniferum HOM05D004873 ORTHO05D006122 5.3e-06 56.2 66 45.5
Hund05991 Selenicereus undatus HOM05D004873 ORTHO05D006122 5.3e-06 56.2 78 37.2
TPR.G13590 Trifolium pratense HOM05D004873 ORTHO05D006122 5.3e-06 56.2 68 41.2
A01p29150 Brassica napus HOM05D004873 ORTHO05D006122 6.9e-06 55.8 74 39.2
BraA01t02979Z Brassica rapa HOM05D004873 ORTHO05D006122 6.9e-06 55.8 74 39.2
Lalb_Chr05g0216921 Lupinus albus HOM05D004873 ORTHO05D006122 6.9e-06 55.8 74 37.8
SMO117G0118 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 6.9e-06 55.8 67 40.3
SGA_v2.0_scaffold165G38251 Striga asiatica HOM05D004873 ORTHO05D006122 6.9e-06 55.8 195 28.2
Carub.0002s0504 Capsella rubella HOM05D004873 ORTHO05D006122 9.0e-06 55.5 73 39.7


User provided reference genes

Program Settings