Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 1.2e-100 369.8 182 100.0
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 6.7e-99 364.0 182 98.4
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 2.7e-84 315.5 188 82.4
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.8e-83 312.8 183 83.6
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 5.2e-83 311.2 188 81.4
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 8.8e-83 310.5 183 83.1
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 2.0e-82 309.3 172 84.9
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 2.0e-82 309.3 173 83.2
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 7.5e-82 307.4 179 83.2
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 9.7e-82 307.0 178 82.0
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 1.7e-81 306.2 182 83.5
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 1.7e-81 306.2 175 82.9
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 1.7e-81 306.2 182 83.0
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 6.3e-81 304.3 182 81.9
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 8.2e-81 303.9 175 81.1
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 1.4e-80 303.1 182 81.9
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 4.1e-80 301.6 180 80.6
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 1.6e-79 299.7 184 78.3
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 2.0e-79 299.3 180 78.9
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 2.0e-79 299.3 182 80.8
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 3.5e-79 298.5 181 80.1
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 3.5e-79 298.5 177 80.8
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 4.5e-79 298.1 182 80.8
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 5.9e-79 297.7 182 80.8
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 1.3e-78 296.6 182 79.1
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 2.2e-78 295.8 182 80.2
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 2.2e-78 295.8 176 82.4
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 2.9e-78 295.4 180 78.9
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 5.0e-78 294.7 183 77.6
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 8.5e-78 293.9 177 80.2
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 1.5e-77 293.1 177 79.1
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 1.5e-77 293.1 177 79.1
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 5.5e-77 291.2 169 82.8
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 7.2e-77 290.8 182 78.6
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 9.4e-77 290.4 166 81.9
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 9.4e-77 290.4 167 83.8
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 1.2e-76 290.0 182 76.9
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 2.1e-76 289.3 177 80.2
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 2.1e-76 289.3 177 80.2
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 2.1e-76 289.3 182 78.0
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 3.6e-76 288.5 181 77.3
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 3.6e-76 288.5 181 77.3
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 3.6e-76 288.5 182 76.4
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 4.7e-76 288.1 186 75.3
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 6.1e-76 287.7 183 77.6
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 8.0e-76 287.3 175 77.7
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 1.0e-75 287.0 178 78.7
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 1.0e-75 287.0 167 81.4
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 1.0e-75 287.0 184 76.6
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 1.4e-75 286.6 176 79.5
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 1.8e-75 286.2 186 77.4
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.8e-75 286.2 186 76.9
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 4.0e-75 285.0 182 76.9
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 4.0e-75 285.0 178 77.5
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 4.0e-75 285.0 184 76.1
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 5.2e-75 284.6 168 79.8
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 5.2e-75 284.6 207 69.6
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 8.8e-75 283.9 174 78.7
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 8.8e-75 283.9 171 78.4
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 1.2e-74 283.5 177 76.8
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 1.2e-74 283.5 165 81.8
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 2.6e-74 282.3 183 75.4
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 2.6e-74 282.3 183 75.4
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 3.4e-74 282.0 178 76.4
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 8.3e-73 277.3 174 77.6
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 1.1e-72 276.9 174 77.0
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 1.1e-72 276.9 174 77.0
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 1.1e-72 276.9 174 77.0
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 1.8e-72 276.2 172 75.0
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 2.4e-72 275.8 174 74.7
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 2.4e-72 275.8 177 74.6
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 2.4e-72 275.8 172 75.0
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 2.4e-72 275.8 174 77.6
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 7.0e-72 274.2 177 76.3
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 9.1e-72 273.9 162 81.5
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 1.2e-71 273.5 175 76.6
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 1.2e-71 273.5 164 78.7
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 1.2e-71 273.5 166 77.7
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 1.6e-71 273.1 165 80.0
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 3.5e-71 271.9 165 79.4
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 3.5e-71 271.9 165 79.4
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 3.5e-71 271.9 175 76.6
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 4.5e-71 271.6 175 76.6
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 1.0e-70 270.4 171 77.2
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 6.5e-70 267.7 182 70.9
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 1.5e-69 266.5 179 73.2
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 4.7e-68 261.5 189 70.9
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 2.3e-67 259.2 160 79.4
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 2.8e-65 252.3 194 68.0
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 1.1e-64 250.4 210 61.4
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 2.4e-64 249.2 180 68.9
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 1.6e-63 246.5 169 69.2
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 1.6e-60 236.5 165 66.1
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.2e-58 230.3 178 66.3
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 4.4e-58 228.4 162 67.3
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 7.0e-56 221.1 155 70.3
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 1.6e-55 219.9 172 63.4
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 5.0e-54 214.9 178 64.0
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 2.8e-52 209.1 131 75.6
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 4.0e-51 205.3 117 85.5
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 6.8e-51 204.5 129 77.5
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 7.5e-50 201.1 126 75.4
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 1.9e-48 196.4 159 64.8
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 1.5e-45 186.8 116 77.6
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 1.9e-45 186.4 114 78.1
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 8.1e-44 181.0 114 78.1
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 1.4e-43 180.3 114 76.3
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 1.7e-41 173.3 184 49.5
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 1.9e-40 169.9 109 74.3
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 2.4e-40 169.5 179 49.7
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 2.3e-38 162.9 109 73.4
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 5.1e-38 161.8 106 77.4
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 8.6e-38 161.0 101 77.2
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 3.6e-20 102.4 152 36.8
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 6.4e-17 91.7 58 74.1
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 8.4e-17 91.3 58 75.9
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 8.7e-14 81.3 182 29.7
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 1.4e-11 73.9 187 26.7
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 2.0e-10 70.1 170 27.6
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 2.6e-10 69.7 49 67.3
AT3G44485 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 1.6e-07 60.5 60 56.7


User provided reference genes

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