Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G3558 Papaver somniferum HOM05D002068 ORTHO05D002029 1.4e-134 483.4 342 100.0
PSO151G0076 Papaver somniferum HOM05D002068 ORTHO05D002029 3.4e-104 382.5 349 75.1
Prupe.5G036600 Prunus persica HOM05D002068 ORTHO05D002029 3.2e-41 173.3 343 48.7
Ciclev10012154m.g Citrus clementina HOM05D002068 ORTHO05D002029 1.6e-40 171.0 350 47.1
TWI81G0802 Tripterygium wilfordii HOM05D002068 ORTHO05D002029 2.7e-40 170.2 367 42.2
TAR375G0554 Trochodendron aralioides HOM05D002068 ORTHO05D002029 2.7e-40 170.2 353 44.8
DCAR_008272 Daucus carota HOM05D002068 ORTHO05D002029 3.5e-40 169.9 382 40.1
Manes.05G009900 Manihot esculenta HOM05D002068 ORTHO05D002029 3.5e-40 169.9 353 44.5
arahy.Tifrunner.gnm1.ann1.Q5RTUN Arachis hypogaea HOM05D002068 ORTHO05D002029 1.0e-39 168.3 362 43.6
arahy.Tifrunner.gnm1.ann1.VYGU2E Arachis hypogaea HOM05D002068 ORTHO05D002029 1.0e-39 168.3 362 43.6
Hma1.2p1_0303F.1_g119120 Hydrangea macrophylla HOM05D002068 ORTHO05D002029 1.0e-39 168.3 346 45.7
vmacro00330 Vaccinium macrocarpon HOM05D002068 ORTHO05D002029 1.7e-39 167.5 357 40.3
TWI15G0848 Tripterygium wilfordii HOM05D002068 ORTHO05D002029 3.0e-39 166.8 365 44.7
Cfa012439 Carpinus fangiana HOM05D002068 ORTHO05D002029 5.0e-39 166.0 361 47.4
THA.LOC104814442 Tarenaya hassleriana HOM05D002068 ORTHO05D002029 1.9e-38 164.1 395 41.0
Dinv25215 Davidia involucrata HOM05D002068 ORTHO05D002029 2.5e-38 163.7 345 39.4
MD14G1120900 Malus domestica HOM05D002068 ORTHO05D002029 5.6e-38 162.5 351 43.9
CsaV3_3G001730 Cucumis sativus L. HOM05D002068 ORTHO05D002029 7.3e-38 162.2 351 48.4
CANSAT21G2072 Cannabis sativa HOM05D002068 ORTHO05D002029 1.6e-37 161.0 357 46.5
Haze_08229 Corylus avellana HOM05D002068 ORTHO05D002029 2.8e-37 160.2 360 47.2
QL12p005199 Quercus lobata HOM05D002068 ORTHO05D002029 2.8e-37 160.2 352 47.2
Ca_06078_v3 Cicer arietinum L. HOM05D002068 ORTHO05D002029 3.6e-37 159.8 350 45.7
Sed0013007 Sechium edule HOM05D002068 ORTHO05D002029 4.7e-37 159.5 354 49.2
TWI60G1070 Tripterygium wilfordii HOM05D002068 ORTHO05D002029 6.2e-37 159.1 362 44.2
Lj8C300T9 Lonicera japonica HOM05D002068 ORTHO05D002029 1.8e-36 157.5 347 44.7
Peaxi162Scf00460g00033 Petunia axillaris HOM05D002068 ORTHO05D002029 3.1e-36 156.8 384 42.7
ECA233G6139 Erigeron canadensis HOM05D002068 ORTHO05D002029 4.0e-36 156.4 343 40.5
Eucgr.D02200 Eucalyptus grandis HOM05D002068 ORTHO05D002029 4.0e-36 156.4 370 38.9
MD06G1101200 Malus domestica HOM05D002068 ORTHO05D002029 6.8e-36 155.6 347 42.7
Actinidia03376 Actinidia chinensis HOM05D002068 ORTHO05D002029 8.9e-36 155.2 336 40.5
MELO3C013853.2 Cucumis melo HOM05D002068 ORTHO05D002029 9.8e-35 151.8 359 48.7
Gohir.D03G171200 Gossypium hirsutum HOM05D002068 ORTHO05D002029 9.8e-35 151.8 368 46.2
Gorai.003G181800 Gossypium raimondii HOM05D002068 ORTHO05D002029 9.8e-35 151.8 364 47.8
TAR374G0127 Trochodendron aralioides HOM05D002068 ORTHO05D002029 9.8e-35 151.8 342 46.8
CiPaw.11G093300 Carya illinoinensis HOM05D002068 ORTHO05D002029 1.7e-34 151.0 353 44.8
Phvul.002G141800 Phaseolus vulgaris HOM05D002068 ORTHO05D002029 2.9e-34 150.2 374 39.8
Hma1.2p1_1063F.1_g253550 Hydrangea macrophylla HOM05D002068 ORTHO05D002029 6.4e-34 149.1 356 41.9
Sabra03G0061400 Salix brachista HOM05D002068 ORTHO05D002029 6.4e-34 149.1 352 42.0
Psat2g136560 Pisum sativum HOM05D002068 ORTHO05D002029 1.4e-33 147.9 350 46.3
Hma1.2p1_2704F.1_g327150 Hydrangea macrophylla HOM05D002068 ORTHO05D002029 1.9e-33 147.5 356 41.6
Oeu006980.1 Olea europaea HOM05D002068 ORTHO05D002029 2.4e-33 147.1 344 41.6
Cpa.g.sc71.70 Carica papaya HOM05D002068 ORTHO05D002029 3.2e-33 146.7 356 40.7
ClCG10G001610 Citrullus lanatus HOM05D002068 ORTHO05D001234 4.1e-33 146.4 354 49.2
Lalb_Chr05g0216091 Lupinus albus HOM05D002068 ORTHO05D002029 4.1e-33 146.4 357 42.0
Oeu006981.1 Olea europaea HOM05D002068 ORTHO05D002029 4.1e-33 146.4 344 41.6
Potri.001G142400 Populus trichocarpa HOM05D002068 ORTHO05D002029 4.1e-33 146.4 349 43.0
VMungo1215G2655 Vigna mungo HOM05D002068 ORTHO05D002029 4.1e-33 146.4 352 41.5
Lalb_Chr16g0381391 Lupinus albus HOM05D002068 ORTHO05D002029 7.0e-33 145.6 350 43.7
arahy.Tifrunner.gnm1.ann1.RMYT06 Arachis hypogaea HOM05D002068 ORTHO05D002029 3.5e-32 143.3 396 41.4
MSTRG.12156 Avicennia marina HOM05D002068 ORTHO05D002029 3.5e-32 143.3 375 40.3
Glyma.01G018700 Glycine max HOM05D002068 ORTHO05D002029 3.5e-32 143.3 347 46.7
Potri.003G091800 Populus trichocarpa HOM05D002068 ORTHO05D002029 3.5e-32 143.3 352 44.0
Lj2g0016669 Lotus japonicus HOM05D002068 ORTHO05D002029 6.0e-32 142.5 350 45.4
CiPaw.12G063800 Carya illinoinensis HOM05D002068 ORTHO05D002029 1.7e-31 141.0 357 43.1
VMungo0251G3624 Vigna mungo HOM05D002068 ORTHO05D002029 3.0e-31 140.2 353 38.0
RcHm_v2.0_Chr7g0209711 Rosa chinensis HOM05D002068 ORTHO05D002029 3.9e-31 139.8 348 40.8
Sed0021104 Sechium edule HOM05D002068 ORTHO05D002029 5.1e-31 139.4 347 37.2
FAN07G0940 Fragaria x ananassa HOM05D002068 ORTHO05D002029 1.1e-30 138.3 348 40.8
Glyma.08G272000 Glycine max HOM05D002068 ORTHO05D002029 1.1e-30 138.3 358 39.4
CSS0037727 Camellia sinensis var. sinensis HOM05D002068 ORTHO05D002029 1.9e-30 137.5 362 41.4
CSS0039799 Camellia sinensis var. sinensis HOM05D002068 ORTHO05D002029 1.9e-30 137.5 362 41.4
FvH4_4g21960 Fragaria vesca HOM05D002068 ORTHO05D002029 1.9e-30 137.5 352 40.6
Aqoxy3G02351 Aquilegia oxysepala HOM05D002068 ORTHO05D002029 3.3e-30 136.7 371 42.3
MELO3C003409.2 Cucumis melo HOM05D002068 ORTHO05D002029 5.6e-30 136.0 346 35.3
Aa31LG2G13360 Aethionema arabicum HOM05D002068 ORTHO05D002029 9.5e-30 135.2 377 41.4
CsaV3_3G049180 Cucumis sativus L. HOM05D002068 ORTHO05D002029 9.5e-30 135.2 346 35.5
THA.LOC104807950 Tarenaya hassleriana HOM05D002068 ORTHO05D002029 1.2e-29 134.8 371 42.0
Thecc.03G227900 Theobroma cacao HOM05D002068 ORTHO05D002029 2.8e-29 133.7 358 41.9
CSS0014279 Camellia sinensis var. sinensis HOM05D002068 ORTHO05D002029 3.6e-29 133.3 342 39.2
Nitab4.5_0004604g0010 Nicotiana tabacum HOM05D002068 ORTHO05D002029 3.6e-29 133.3 361 39.3
Phvul.003G285600 Phaseolus vulgaris HOM05D002068 ORTHO05D002029 4.7e-29 132.9 358 38.3
PGR031G2163 Punica granatum HOM05D002068 ORTHO05D002029 8.1e-29 132.1 366 39.9
Duzib084G1376 Durio zibethinus HOM05D002068 ORTHO05D002029 1.1e-28 131.7 364 42.3
Glyma.01G096800 Glycine max HOM05D002068 ORTHO05D002029 1.1e-28 131.7 344 41.3
Glyma.08G272100 Glycine max HOM05D002068 ORTHO05D002029 6.8e-28 129.0 357 38.4
Medtr5g030570 Medicago truncatula HOM05D002068 ORTHO05D002029 1.5e-27 127.9 347 48.1
Dinv28957 Davidia involucrata HOM05D002068 ORTHO05D002029 5.8e-27 125.9 349 35.8
PGSC0003DMG400002107 Solanum tuberosum HOM05D002068 ORTHO05D002029 5.8e-27 125.9 384 35.4
BcaB06g28833 Brassica carinata HOM05D002068 ORTHO05D002029 1.3e-26 124.8 421 33.7
TPR.G1043 Trifolium pratense HOM05D002068 ORTHO05D002029 1.3e-26 124.8 352 39.8
Aa31LG9G15270 Aethionema arabicum HOM05D002068 ORTHO05D002029 2.2e-26 124.0 394 39.6
CARHR129400 Cardamine hirsuta HOM05D002068 ORTHO05D002029 3.7e-26 123.2 373 38.6
Gorai.004G185400 Gossypium raimondii HOM05D002068 ORTHO05D002029 6.4e-26 122.5 337 34.7
arahy.Tifrunner.gnm1.ann1.K5VAZM Arachis hypogaea HOM05D002068 ORTHO05D002029 1.4e-25 121.3 370 38.1
Sed0014879 Sechium edule HOM05D002068 ORTHO05D002029 1.4e-25 121.3 344 43.3
HanXRQChr13g0414131 Helianthus annuus HOM05D002068 ORTHO05D002029 2.4e-25 120.6 408 40.0
COL.COLO4_13969 Corchorus olitorius HOM05D002068 ORTHO05D002029 3.2e-25 120.2 378 41.3
Nitab4.5_0000256g0320 Nicotiana tabacum HOM05D002068 ORTHO05D002029 3.2e-25 120.2 360 38.1
Hund14399 Selenicereus undatus HOM05D002068 ORTHO05D002029 3.2e-25 120.2 405 41.0
Thhalv10016759m.g Eutrema salsugineum HOM05D002068 ORTHO05D002029 4.1e-25 119.8 417 34.5
Sopen06g021390 Solanum pennellii HOM05D002068 ORTHO05D002029 9.2e-25 118.6 404 37.4
BolC4t27901H Brassica oleracea HOM05D002068 ORTHO05D002029 1.2e-24 118.2 356 36.0
Glyma.08G272200 Glycine max HOM05D002068 ORTHO05D002029 1.2e-24 118.2 358 36.9
BcaC02g07727 Brassica carinata HOM05D002068 ORTHO05D002029 1.6e-24 117.9 362 37.6
Peaxi162Scf00615g00064 Petunia axillaris HOM05D002068 ORTHO05D002029 2.7e-24 117.1 351 36.5
AT2G35230 Arabidopsis thaliana HOM05D002068 ORTHO05D002029 4.6e-24 116.3 421 34.9
Duzib205G1382 Durio zibethinus HOM05D002068 ORTHO05D002029 4.6e-24 116.3 369 37.9
Gohir.A03G001100 Gossypium hirsutum HOM05D002068 ORTHO05D002029 4.6e-24 116.3 375 40.0
Gorai.006G216500 Gossypium raimondii HOM05D002068 ORTHO05D002029 1.0e-23 115.2 355 34.4
Atru.chr6.1710 Acer truncatum HOM05D002068 ORTHO05D002029 1.7e-23 114.4 369 38.8
Solyc06g061190.1 Solanum lycopersicum HOM05D002068 ORTHO05D002029 1.7e-23 114.4 414 37.7
C04p64180 Brassica napus HOM05D002068 ORTHO05D002029 3.0e-23 113.6 360 38.6
AUR62007291 Chenopodium quinoa HOM05D002068 ORTHO05D002029 5.1e-23 112.8 368 42.4
Sp4g17450 Schrenkiella parvula HOM05D002068 ORTHO05D002029 8.6e-23 112.1 413 34.4
Migut.E00932 Erythranthe guttata HOM05D002068 ORTHO05D002029 1.1e-22 111.7 353 40.2
Duzib068G0736 Durio zibethinus HOM05D002068 ORTHO05D002029 1.5e-22 111.3 386 36.8
CAN.G201.29 Capsicum annuum HOM05D002068 ORTHO05D002029 1.9e-22 110.9 354 42.7
DCAR_005628 Daucus carota HOM05D002068 ORTHO05D002029 1.9e-22 110.9 374 42.0
Actinidia14810 Actinidia chinensis HOM05D002068 ORTHO05D002029 2.5e-22 110.5 345 31.9
Sopen08g025530 Solanum pennellii HOM05D002068 ORTHO05D002029 3.3e-22 110.2 403 38.2
Rhsim07G0126700 Rhododendron simsii HOM05D002068 ORTHO05D002029 4.3e-22 109.8 354 42.7
Sabra01G0111200 Salix brachista HOM05D002068 ORTHO05D002029 5.6e-22 109.4 329 38.9
ATR0665G256 Amborella trichopoda HOM05D002068 ORTHO05D002029 8.1e-21 105.5 354 35.0
Sc01g0007430 Simmondsia chinensis HOM05D002068 ORTHO05D002029 1.1e-20 105.1 383 38.1
Ah.12g055030 Amaranthus hybridus HOM05D002068 ORTHO05D002029 1.8e-20 104.4 393 34.4
AUR62018716 Chenopodium quinoa HOM05D002068 ORTHO05D002029 1.8e-20 104.4 359 37.6
CAN.G1381.5 Capsicum annuum HOM05D002068 ORTHO05D002029 6.8e-20 102.4 422 40.8
GSVIVG01013160001 Vitis vinifera HOM05D002068 ORTHO05D002029 6.8e-20 102.4 222 40.5
Lsat_1_v5_gn_6_65520 Lactuca sativa HOM05D002068 ORTHO05D002029 1.5e-19 101.3 353 34.6
AL4G31260 Arabidopsis lyrata HOM05D002068 ORTHO05D002029 2.6e-19 100.5 453 32.0
BraA05t19991Z Brassica rapa HOM05D002068 ORTHO05D002029 9.9e-19 98.6 412 35.9
PGSC0003DMG400042183 Solanum tuberosum HOM05D002068 ORTHO05D002029 9.9e-19 98.6 392 38.0
HPP92_020799 Vanilla planifolia HOM05D002068 ORTHO05D002029 6.4e-18 95.9 347 37.5
A04p26780 Brassica napus HOM05D002068 ORTHO05D002029 3.2e-17 93.6 172 38.4
A05p10530 Brassica napus HOM05D002068 ORTHO05D002029 3.2e-17 93.6 431 34.6
Gohir.D09G193050 Gossypium hirsutum HOM05D002068 ORTHO05D002029 3.2e-17 93.6 352 30.7
BolC4t22938H Brassica oleracea HOM05D002068 ORTHO05D002029 7.1e-17 92.4 400 34.8
Cc08_g02760 Coffea canephora HOM05D002068 ORTHO05D002029 2.1e-16 90.9 220 38.2
AL1G46870 Arabidopsis lyrata HOM05D002068 ORTHO05D002029 3.5e-16 90.1 358 31.0
BcaC02g11626 Brassica carinata HOM05D002068 ORTHO05D002029 7.8e-16 89.0 173 41.0
C04p12950 Brassica napus HOM05D002068 ORTHO05D002029 7.8e-16 89.0 173 41.0
CDE03G0421 Ceratophyllum demersum HOM05D002068 ORTHO05D002029 1.0e-15 88.6 185 38.4
BcaB02g09468 Brassica carinata HOM05D002068 ORTHO05D002029 3.0e-15 87.0 436 30.7
Oeu020141.1 Olea europaea HOM05D002068 ORTHO05D002029 3.9e-15 86.7 189 38.1
Carub.0004s1693 Capsella rubella HOM05D002068 ORTHO05D002029 8.7e-15 85.5 65 69.2
Manes.01G233900 Manihot esculenta HOM05D002068 ORTHO05D002029 8.7e-15 85.5 70 65.7
Carub.0001s3100 Capsella rubella HOM05D002068 ORTHO05D002029 1.5e-14 84.7 351 28.5
Ah.07g200340 Amaranthus hybridus HOM05D002068 ORTHO05D002029 4.3e-14 83.2 437 30.7
BraA04t18182Z Brassica rapa HOM05D002068 ORTHO05D002029 7.3e-14 82.4 352 32.7
MBI04_g23601_MAGBIO Magnolia biondii HOM05D002068 ORTHO05D002029 3.6e-13 80.1 75 60.0
HPP92_014860 Vanilla planifolia HOM05D002068 ORTHO05D002029 1.1e-12 78.6 194 37.1
AT1G32610 Arabidopsis thaliana HOM05D002068 ORTHO05D002029 3.1e-12 77.0 352 28.4
BolC3t14669H Brassica oleracea HOM05D002068 ORTHO05D002029 3.1e-12 77.0 63 63.5
A03p19480 Brassica napus HOM05D002068 ORTHO05D002029 6.9e-12 75.9 65 63.1
BcaC01g05736 Brassica carinata HOM05D002068 ORTHO05D002029 1.5e-11 74.7 66 63.6
C03p22700 Brassica napus HOM05D002068 ORTHO05D002029 1.5e-11 74.7 66 63.6
BraA03t11201Z Brassica rapa HOM05D002068 ORTHO05D002029 1.5e-11 74.7 65 61.5
unitig_8.g3918 Utricularia gibba HOM05D002068 ORTHO05D002029 2.0e-11 74.3 205 36.6
CDE06G0671 Ceratophyllum demersum HOM05D002068 ORTHO05D002029 7.6e-11 72.4 205 42.9
Sp2g11590 Schrenkiella parvula HOM05D002068 ORTHO05D002029 1.3e-10 71.6 342 29.8
SpUn0036_0020 Schrenkiella parvula HOM05D002068 ORTHO05D002029 1.3e-10 71.6 342 29.8
BcaC06g34348 Brassica carinata HOM05D002068 ORTHO05D002029 8.4e-10 68.9 343 29.4
C07p30090 Brassica napus HOM05D002068 ORTHO05D002029 8.4e-10 68.9 343 29.4
BolC7t43548H Brassica oleracea HOM05D002068 ORTHO05D002029 8.4e-10 68.9 343 29.4
BcaC03g16888 Brassica carinata HOM05D002068 ORTHO05D002029 1.1e-09 68.6 343 29.7
unitig_22.g5497 Utricularia gibba HOM05D000381 ORTHO05D002029 1.4e-09 68.2 78 51.3
BraA02t08048Z Brassica rapa HOM05D002068 ORTHO05D002029 3.2e-09 67.0 343 30.3
A06p45670 Brassica napus HOM05D002068 ORTHO05D002029 7.1e-09 65.9 330 29.4
BraA06t27436Z Brassica rapa HOM05D002068 ORTHO05D002029 7.1e-09 65.9 330 29.4
A02p30320 Brassica napus HOM05D002068 ORTHO05D002029 1.6e-08 64.7 346 29.8
BcaC06g31446 Brassica carinata HOM05D002068 ORTHO05D002029 1.0e-07 62.0 330 30.0
CARHR174720 Cardamine hirsuta HOM05D002068 ORTHO05D002029 3.0e-07 60.5 346 29.8
C02p47850 Brassica napus HOM05D002068 ORTHO05D002029 1.1e-06 58.5 330 28.8
BolC2t10818H Brassica oleracea HOM05D002068 ORTHO05D002029 1.1e-06 58.5 330 28.8
AL8G11560 Arabidopsis lyrata HOM05D002068 ORTHO05D002029 1.9e-06 57.8 342 28.4
Carub.0008s0114 Capsella rubella HOM05D002068 ORTHO05D002029 1.9e-06 57.8 354 28.2
Nn1g08045 Nelumbo nucifera HOM05D002068 ORTHO05D002029 3.3e-06 57.0 222 40.1


User provided reference genes

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