Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2995 Papaver somniferum HOM05D002268 ORTHO05D006937 0.0e+00 1081.2 531 100.0
PSO384G3396 Papaver somniferum HOM05D002268 ORTHO05D006937 1.3e-299 1032.3 534 95.5
Aqoxy1G00300 Aquilegia oxysepala HOM05D002268 ORTHO05D006937 3.2e-210 735.3 514 72.6
Nn7g36125 Nelumbo nucifera HOM05D002268 ORTHO05D006937 1.2e-209 733.4 535 69.7
CsaV3_4G024220 Cucumis sativus L. HOM05D002268 ORTHO05D006937 5.7e-207 724.5 511 71.6
Rhsim01G0191500 Rhododendron simsii HOM05D002268 ORTHO05D006937 8.2e-206 720.7 492 74.0
MELO3C014598.2 Cucumis melo HOM05D002268 ORTHO05D006937 1.2e-204 716.8 512 70.3
Haze_23130 Corylus avellana HOM05D002268 ORTHO05D006937 1.7e-203 713.0 542 67.5
Prupe.5G028600 Prunus persica HOM05D002268 ORTHO05D006937 6.5e-203 711.1 488 72.1
CiPaw.14G119300 Carya illinoinensis HOM05D002268 ORTHO05D006937 1.1e-202 710.3 500 71.0
QL01p004788 Quercus lobata HOM05D002268 ORTHO05D006937 6.1e-201 704.5 509 68.6
vmacro19340 Vaccinium macrocarpon HOM05D002268 ORTHO05D006937 8.0e-201 704.1 498 73.1
Ah.04g161910 Amaranthus hybridus HOM05D002268 ORTHO05D006937 2.0e-199 699.5 509 68.0
GSVIVG01025274001 Vitis vinifera HOM05D002268 ORTHO05D006937 5.7e-199 698.0 537 67.0
arahy.Tifrunner.gnm1.ann1.02894U Arachis hypogaea HOM05D002268 ORTHO05D006937 7.5e-199 697.6 489 72.6
ClCG02G023280 Citrullus lanatus HOM05D002268 ORTHO05D006937 7.5e-199 697.6 532 66.9
MD03G1176400 Malus domestica HOM05D002268 ORTHO05D006937 7.5e-199 697.6 479 72.4
Sc16g0011510 Simmondsia chinensis HOM05D002268 ORTHO05D006937 7.5e-199 697.6 470 73.8
Hma1.2p1_0861F.1_g229700 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 4.8e-198 694.9 466 75.5
Ca_11284_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 1.4e-197 693.3 460 75.0
Ca_30227_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 1.4e-197 693.3 460 75.0
arahy.Tifrunner.gnm1.ann1.8VL3CN Arachis hypogaea HOM05D002268 ORTHO05D006937 1.8e-197 693.0 473 72.7
Sed0017829 Sechium edule HOM05D002268 ORTHO05D006937 2.4e-197 692.6 523 68.8
Cpa.g.sc84.62 Carica papaya HOM05D002268 ORTHO05D006937 4.1e-197 691.8 451 74.3
Lalb_Chr19g0138111 Lupinus albus HOM05D002268 ORTHO05D006937 7.0e-197 691.0 430 77.7
arahy.Tifrunner.gnm1.ann1.6XYC84 Arachis hypogaea HOM05D002268 ORTHO05D006937 9.1e-197 690.6 481 72.1
TWI60G0297 Tripterygium wilfordii HOM05D002268 ORTHO05D006937 9.1e-197 690.6 446 74.9
MD11G1196700 Malus domestica HOM05D002268 ORTHO05D006937 2.7e-196 689.1 432 76.4
arahy.Tifrunner.gnm1.ann1.VSBS4R Arachis hypogaea HOM05D002268 ORTHO05D006937 3.5e-196 688.7 447 74.9
Duzib168G2040 Durio zibethinus HOM05D002268 ORTHO05D006937 3.5e-196 688.7 467 72.8
Gorai.009G073000 Gossypium raimondii HOM05D002268 ORTHO05D006937 2.9e-195 685.6 454 73.1
Lj3g0006923 Lotus japonicus HOM05D002268 ORTHO05D006937 8.5e-195 684.1 426 76.5
DCAR_000723 Daucus carota HOM05D002268 ORTHO05D006937 1.9e-194 682.9 434 74.2
AUR62019294 Chenopodium quinoa HOM05D002268 ORTHO05D006937 2.5e-194 682.6 426 76.5
Gohir.D05G072000 Gossypium hirsutum HOM05D002268 ORTHO05D006937 3.2e-194 682.2 454 72.5
arahy.Tifrunner.gnm1.ann1.AYE0CN Arachis hypogaea HOM05D002268 ORTHO05D006937 1.2e-193 680.2 462 72.5
COL.COLO4_24897 Corchorus olitorius HOM05D002268 ORTHO05D006937 1.2e-193 680.2 457 71.1
PGR102G0832 Punica granatum HOM05D002268 ORTHO05D006937 1.2e-193 680.2 426 76.5
Eucgr.B03681 Eucalyptus grandis HOM05D002268 ORTHO05D006937 2.1e-193 679.5 406 78.3
Atru.chr3.2733 Acer truncatum HOM05D002268 ORTHO05D006937 2.7e-193 679.1 496 69.0
Nitab4.5_0006994g0060 Nicotiana tabacum HOM05D002268 ORTHO05D006937 2.3e-192 676.0 486 69.1
Potri.001G259000 Populus trichocarpa HOM05D002268 ORTHO05D006937 2.3e-192 676.0 464 70.9
EL10Ac4g10259 Beta vulgaris HOM05D002268 ORTHO05D006937 3.0e-192 675.6 536 65.3
EL10Ac4g10275 Beta vulgaris HOM05D002268 ORTHO05D006937 3.0e-192 675.6 536 65.3
Psat7g212760 Pisum sativum HOM05D002268 ORTHO05D006937 4.0e-192 675.2 460 73.3
Lj2A631G13 Lonicera japonica HOM05D002268 ORTHO05D006937 6.8e-192 674.5 502 69.1
Glyma.11G133500 Glycine max HOM05D002268 ORTHO05D006937 7.5e-191 671.0 437 75.1
Phvul.011G059600 Phaseolus vulgaris HOM05D002268 ORTHO05D006937 9.8e-191 670.6 426 76.3
CAN.G956.10 Capsicum annuum HOM05D002268 ORTHO05D006937 1.7e-190 669.8 487 68.2
HPP92_009580 Vanilla planifolia HOM05D002268 ORTHO05D006937 2.2e-190 669.5 440 73.2
VMungo1127G0743 Vigna mungo HOM05D002268 ORTHO05D006937 4.9e-190 668.3 426 76.3
Solyc09g074100.4 Solanum lycopersicum HOM05D002268 ORTHO05D006937 6.3e-190 667.9 488 68.4
Sopen09g028920 Solanum pennellii HOM05D002268 ORTHO05D006937 1.4e-189 666.8 488 68.6
Medtr4g065023 Medicago truncatula HOM05D002268 ORTHO05D006937 5.4e-189 664.8 448 73.7
PGSC0003DMG400003844 Solanum tuberosum HOM05D002268 ORTHO05D006937 7.0e-189 664.5 469 69.7
Actinidia06337 Actinidia chinensis HOM05D002268 ORTHO05D006937 2.0e-188 662.9 462 72.5
Carub.0008s0647 Capsella rubella HOM05D002268 ORTHO05D006937 2.0e-188 662.9 474 69.8
CARHR041380 Cardamine hirsuta HOM05D002268 ORTHO05D006937 2.7e-188 662.5 413 76.8
Nitab4.5_0005819g0070 Nicotiana tabacum HOM05D002268 ORTHO05D006937 3.5e-188 662.1 481 69.0
Aa31LG10G3500 Aethionema arabicum HOM05D002268 ORTHO05D006937 7.7e-188 661.0 413 76.5
Thhalv10011432m.g Eutrema salsugineum HOM05D002268 ORTHO05D006937 7.7e-188 661.0 408 77.0
A08p02940 Brassica napus HOM05D002268 ORTHO05D006937 1.0e-187 660.6 412 76.5
BraA08t32327Z Brassica rapa HOM05D002268 ORTHO05D006937 1.3e-187 660.2 440 73.2
MBI04_g17077_MAGBIO Magnolia biondii HOM05D002268 ORTHO05D006937 1.7e-187 659.8 484 68.4
Carub.0001s4017 Capsella rubella HOM05D002268 ORTHO05D006937 1.1e-186 657.1 484 68.6
BcaB02g11231 Brassica carinata HOM05D002268 ORTHO05D006937 1.5e-186 656.8 462 70.1
BcaC01g01260 Brassica carinata HOM05D002268 ORTHO05D006937 1.9e-186 656.4 448 72.1
Sp1g37990 Schrenkiella parvula HOM05D002268 ORTHO05D006937 2.5e-186 656.0 425 74.1
AL1G59110 Arabidopsis lyrata HOM05D002268 ORTHO05D006937 4.3e-186 655.2 450 71.6
Migut.N02313 Erythranthe guttata HOM05D002268 ORTHO05D006937 4.3e-186 655.2 465 69.9
HanXRQChr07g0197481 Helianthus annuus HOM05D002268 ORTHO05D006937 1.2e-185 653.7 438 72.6
AT1G51310 Arabidopsis thaliana HOM05D002268 ORTHO05D006937 1.6e-185 653.3 453 71.5
C03p89920 Brassica napus HOM05D002268 ORTHO05D006937 3.6e-185 652.1 448 71.7
BolC3t21311H Brassica oleracea HOM05D002268 ORTHO05D006937 3.6e-185 652.1 448 71.7
Lsat_1_v5_gn_2_97721 Lactuca sativa HOM05D002268 ORTHO05D006937 4.7e-185 651.7 468 69.7
ATR0605G089 Amborella trichopoda HOM05D002268 ORTHO05D006937 6.1e-185 651.4 399 76.2
ECA238G2081 Erigeron canadensis HOM05D002268 ORTHO05D006937 2.3e-184 649.4 438 71.7
RcHm_v2.0_Chr7g0231131 Rosa chinensis HOM05D002268 ORTHO05D006937 3.0e-184 649.0 536 63.4
Cc09_g04150 Coffea canephora HOM05D002268 ORTHO05D006937 5.2e-184 648.3 436 72.2
SalBow5G0100 Salvia bowleyana HOM05D002268 ORTHO05D006937 1.3e-182 643.7 499 66.5
AUR62000114 Chenopodium quinoa HOM05D002268 ORTHO05D006937 4.1e-181 638.6 447 70.2
TPR.G35035 Trifolium pratense HOM05D002268 ORTHO05D006937 9.2e-181 637.5 430 73.0
FvH4_5g33050 Fragaria vesca HOM05D002268 ORTHO05D006937 2.0e-180 636.3 460 69.6
Oeu043297.4 Olea europaea HOM05D002268 ORTHO05D006937 5.9e-180 634.8 505 64.6
FAN18G3947 Fragaria x ananassa HOM05D002268 ORTHO05D006937 1.0e-179 634.0 468 68.8
Zm00001eb005670 Zea mays HOM05D002268 ORTHO05D006937 9.5e-178 627.5 407 72.5
Manes.06G165000 Manihot esculenta HOM05D002268 ORTHO05D006937 3.6e-177 625.5 424 72.4
Os03g0174600 Oryza sativa ssp. japonica HOM05D002268 ORTHO05D006937 2.6e-175 619.4 434 69.1
CSS0013347 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 4.9e-174 615.1 373 78.6
Sabra16G0158600 Salix brachista HOM05D002268 ORTHO05D006937 3.2e-173 612.5 464 66.4
A05p19700 Brassica napus HOM05D002268 ORTHO05D006937 2.0e-172 609.8 379 76.3
CDE04G2511 Ceratophyllum demersum HOM05D002268 ORTHO05D006937 3.0e-171 605.9 511 62.8
SGA_v2.0_scaffold42G16104 Striga asiatica HOM05D002268 ORTHO05D006937 5.6e-170 601.7 474 64.6
Hund22033 Selenicereus undatus HOM05D002268 ORTHO05D006937 7.6e-159 564.7 611 52.4
BcaC05g27353 Brassica carinata HOM05D002268 ORTHO05D006937 1.2e-156 557.4 360 73.3
Thecc.09G232700 Theobroma cacao HOM05D002268 ORTHO05D006937 1.6e-153 547.0 373 71.3
Lsat_1_v5_gn_2_132680 Lactuca sativa HOM05D002268 ORTHO05D006937 3.4e-151 539.3 404 66.6
BolC5t32017H Brassica oleracea HOM05D002268 ORTHO05D006937 1.6e-148 530.4 503 56.3
CSS0030827 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 4.6e-148 528.9 445 62.2
SEGI_13867 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 5.4e-141 505.4 384 64.8
C05p32860 Brassica napus HOM05D002268 ORTHO05D006937 1.5e-138 497.3 482 55.2
Mapoly0129s0019 Marchantia polymorpha HOM05D002268 ORTHO05D006937 9.9e-135 484.6 402 59.7
Pp3c15_1840 Physcomitrium patens HOM05D002268 ORTHO05D006937 9.9e-135 484.6 456 56.1
SMO331G0070 Selaginella moellendorffii HOM05D002268 ORTHO05D006937 2.9e-134 483.0 379 61.7
AagrBONN_evm.TU.Sc2ySwM_340.361 Anthoceros agrestis HOM05D002268 ORTHO05D006937 1.2e-132 477.6 407 58.2
Dinv22182 Davidia involucrata HOM05D002268 ORTHO05D006937 6.0e-132 475.3 262 85.5
Hma1.2p1_0861F.1_g229710 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 1.9e-130 470.3 273 82.8
TAR369G0718 Trochodendron aralioides HOM05D002268 ORTHO05D006937 9.0e-128 461.5 329 71.7
Ciclev10006706m.g Citrus clementina HOM05D002268 ORTHO05D006937 9.3e-125 451.4 546 51.1
Glyma.12G057700 Glycine max HOM05D002268 ORTHO05D006937 7.2e-117 425.2 261 78.9
FAN08G3580 Fragaria x ananassa HOM05D002268 ORTHO05D006937 1.8e-115 420.6 320 67.5
MCO02G416 Micromonas commoda HOM05D002268 ORTHO05D006937 4.8e-113 412.5 438 50.2
Peaxi162Scf00004g00224 Petunia axillaris HOM05D002268 ORTHO05D006937 1.1e-109 401.4 253 75.1
PRCOL_00001138 Prasinoderma coloniale HOM05D002268 ORTHO05D006937 4.2e-109 399.4 399 51.9
FAN04G1610 Fragaria x ananassa HOM05D002268 ORTHO05D006937 9.7e-106 388.3 334 61.7
AagrBONN_evm.TU.Sc2ySwM_368.606 Anthoceros agrestis HOM05D002268 ORTHO05D006937 7.7e-103 378.6 369 53.4
Cre14.g628000 Chlamydomonas reinhardtii HOM05D002268 ORTHO05D006937 2.9e-102 376.7 529 41.8
Actinidia26439 Actinidia chinensis HOM05D002268 ORTHO05D006937 3.0e-99 366.7 236 75.4
CBR_g40742 Chara braunii HOM05D002268 ORTHO05D006937 2.5e-93 347.1 480 43.8
Gohir.A05G069100 Gossypium hirsutum HOM05D002268 ORTHO05D006937 1.8e-80 304.3 250 62.0
unitig_21.g20902 Utricularia gibba HOM05D002268 ORTHO05D007950 5.6e-69 266.2 189 68.3
BcaB04g17220 Brassica carinata HOM05D002268 ORTHO05D006937 6.1e-68 262.7 178 71.3
unitig_21.g20901 Utricularia gibba HOM05D002268 ORTHO05D006937 4.9e-65 253.1 189 66.7
Hma1.2p1_0861F.1_g229720 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 2.3e-54 217.6 139 74.8
CBR_g19922 Chara braunii HOM05D002268 ORTHO05D021278 1.3e-49 201.8 273 39.6
C03p89950 Brassica napus HOM05D002268 ORTHO05D001336 2.9e-49 200.7 212 53.3
AagrBONN_evm.TU.Sc2ySwM_117.3752 Anthoceros agrestis HOM05D002268 ORTHO05D021278 1.4e-48 198.4 326 34.4
MSTRG.17590 Avicennia marina HOM05D002268 ORTHO05D006937 5.4e-48 196.4 205 55.6
BcaC01g01262 Brassica carinata HOM05D002268 ORTHO05D006937 5.4e-48 196.4 316 40.2
Pp3c4_6690 Physcomitrium patens HOM05D002268 ORTHO05D021278 1.0e-46 192.2 288 37.5
BolC3t21314H Brassica oleracea HOM05D002268 ORTHO05D006937 7.3e-45 186.0 212 50.9
CSS0037797 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 1.2e-44 185.3 112 75.9
Mapoly0010s0199 Marchantia polymorpha HOM05D002268 ORTHO05D021278 1.2e-42 178.7 388 32.7
SEGI_07269 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 5.4e-40 169.9 143 60.1
PRCOL_00001597 Prasinoderma coloniale HOM05D002268 ORTHO05D021278 9.2e-40 169.1 303 35.0
MCO12G105 Micromonas commoda HOM05D002268 ORTHO05D021278 2.7e-39 167.5 298 35.9
Lsat_1_v5_gn_1_117501 Lactuca sativa HOM05D002268 ORTHO05D006937 9.3e-32 142.5 74 79.7
BraA05t20874Z Brassica rapa HOM05D002268 ORTHO05D006937 1.2e-31 142.1 86 75.6
Nn3g21873 Nelumbo nucifera HOM05D002268 ORTHO05D006937 4.9e-25 120.2 100 64.0
C03p89940 Brassica napus HOM05D002268 ORTHO05D040778 1.9e-24 118.2 116 56.0
SEGI_39418 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 2.7e-23 114.4 144 43.8
BolC3t21313H Brassica oleracea HOM05D002268 ORTHO05D040778 1.8e-22 111.7 112 55.4
MELO3C029180.2 Cucumis melo HOM05D002268 ORTHO05D168145 3.9e-22 110.5 255 33.7
A08p02920 Brassica napus HOM05D002268 ORTHO05D099342 1.4e-16 92.0 99 51.5
Duzib150G1137 Durio zibethinus HOM05D002268 ORTHO05D006937 1.8e-14 85.1 105 50.5
MELO3C032733.2 Cucumis melo HOM05D002268 ORTHO05D170637 5.3e-11 73.6 108 43.5
MELO3C035704.2 Cucumis melo HOM05D002268 ORTHO05D166817 9.3e-08 62.8 145 29.7
Actinidia23968 Actinidia chinensis HOM05D002268 ORTHO05D006937 1.6e-07 62.0 38 81.6
QL06p040831 Quercus lobata HOM05D002268 ORTHO05D006937 1.3e-06 58.9 28 89.3


User provided reference genes

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