Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 2.4e-190 668.7 348 100.0
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 3.7e-90 335.9 331 61.3
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 7.3e-86 321.6 332 58.7
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 5.4e-65 252.3 337 46.9
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 8.7e-63 245.0 347 46.7
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 7.4e-62 241.9 334 45.2
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 3.4e-59 233.0 344 45.3
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 4.5e-59 232.6 375 42.7
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 5.8e-59 232.3 344 45.1
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 8.4e-58 228.4 350 43.1
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.4e-57 227.6 321 45.8
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 2.4e-57 226.9 327 45.3
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 3.2e-57 226.5 338 44.7
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 6.0e-56 222.2 321 44.9
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 1.0e-55 221.5 328 47.0
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 8.7e-55 218.4 338 44.1
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 2.5e-54 216.9 345 43.5
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 7.4e-54 215.3 334 43.1
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 1.1e-52 211.5 338 41.4
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 1.1e-52 211.5 337 42.1
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 5.3e-52 209.1 335 43.3
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 6.9e-52 208.8 345 41.7
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 9.0e-52 208.4 324 43.5
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 1.2e-51 208.0 339 41.3
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 2.0e-51 207.2 337 43.0
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 7.6e-51 205.3 327 41.6
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 1.7e-50 204.1 323 40.6
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 2.2e-50 203.8 315 43.5
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 2.9e-50 203.4 336 40.2
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 2.9e-50 203.4 337 39.8
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 4.9e-50 202.6 336 41.4
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 4.9e-50 202.6 337 41.5
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 1.1e-49 201.4 324 41.7
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 1.1e-49 201.4 336 41.4
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 2.5e-49 200.3 328 40.9
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 3.2e-49 199.9 348 41.7
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 4.2e-49 199.5 314 41.4
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 4.2e-49 199.5 325 40.0
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 4.2e-49 199.5 343 40.5
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 5.5e-49 199.1 352 39.8
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 5.5e-49 199.1 341 41.6
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 7.1e-49 198.7 346 39.6
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 9.3e-49 198.4 314 41.4
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 9.3e-49 198.4 332 41.6
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 1.2e-48 198.0 346 41.0
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 1.6e-48 197.6 341 41.1
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 2.7e-48 196.8 333 40.2
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 2.7e-48 196.8 327 41.3
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 3.5e-48 196.4 345 40.0
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 6.0e-48 195.7 324 40.7
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 7.9e-48 195.3 352 40.1
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 1.0e-47 194.9 333 39.9
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 2.3e-47 193.7 353 38.2
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 6.7e-47 192.2 335 38.8
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 6.7e-47 192.2 285 42.8
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 6.7e-47 192.2 336 40.2
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 3.3e-46 189.9 317 41.0
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 4.3e-46 189.5 337 40.7
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 9.6e-46 188.3 344 38.1
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 2.1e-45 187.2 358 37.4
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 3.7e-45 186.4 344 37.5
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 6.3e-45 185.7 346 38.4
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 6.3e-45 185.7 344 38.1
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 6.3e-45 185.7 313 39.6
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 6.3e-45 185.7 340 39.1
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 6.3e-45 185.7 211 50.2
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 1.1e-44 184.9 357 38.1
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 1.8e-44 184.1 317 37.2
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 4.1e-44 183.0 323 39.6
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 6.9e-44 182.2 348 36.5
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 9.0e-44 181.8 340 39.1
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 9.0e-44 181.8 335 38.2
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 9.0e-44 181.8 311 38.3
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 1.2e-43 181.4 332 37.3
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 1.5e-43 181.0 346 39.9
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 2.6e-43 180.3 332 38.6
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 2.6e-43 180.3 324 39.5
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 5.9e-43 179.1 357 37.5
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 5.0e-42 176.0 350 36.3
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 5.0e-42 176.0 300 39.7
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 8.5e-42 175.3 348 39.7
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 1.1e-41 174.9 346 38.4
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 3.2e-41 173.3 352 37.2
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 4.2e-41 172.9 304 38.8
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 4.2e-41 172.9 344 38.7
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 1.6e-40 171.0 332 36.1
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 6.1e-40 169.1 318 37.1
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 1.0e-39 168.3 260 40.8
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 5.1e-39 166.0 326 37.7
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 1.1e-38 164.9 347 36.6
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 1.9e-38 164.1 317 38.2
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 2.5e-38 163.7 303 38.3
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 4.3e-38 162.9 345 36.5
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 5.7e-38 162.5 329 37.7
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 1.3e-37 161.4 325 35.1
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 4.8e-37 159.5 348 35.3
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 6.3e-37 159.1 201 45.8
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 8.2e-37 158.7 349 34.1
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 2.4e-36 157.1 172 50.6
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 2.0e-35 154.1 294 36.7
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 2.6e-35 153.7 327 35.8
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 6.5e-34 149.1 334 35.6
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 1.9e-33 147.5 335 34.0
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 4.2e-33 146.4 499 30.5
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 1.2e-32 144.8 331 34.1
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 3.3e-30 136.7 296 35.5
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 6.9e-28 129.0 170 52.9
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 2.6e-27 127.1 323 32.5
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 3.4e-27 126.7 186 44.1
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 1.7e-26 124.4 155 47.1
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 2.9e-26 123.6 330 33.6
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 2.1e-24 117.5 214 36.9
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 7.0e-20 102.4 344 27.9
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 3.5e-19 100.1 344 29.1
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 2.2e-18 97.4 305 29.2
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 2.5e-17 94.0 85 62.4
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 1.0e-15 88.6 182 34.6
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 1.7e-13 81.3 324 27.8
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 2.5e-09 67.4 271 28.0
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 3.6e-08 63.5 292 29.5
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 6.1e-08 62.8 88 45.5


User provided reference genes

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