Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2548 Papaver somniferum HOM05D005759 ORTHO05D007172 5.5e-125 451.1 240 100.0
PSO063G1818 Papaver somniferum HOM05D005759 ORTHO05D007172 3.8e-102 375.2 223 90.1
PSO170G6466 Papaver somniferum HOM05D005759 ORTHO05D007172 9.5e-69 264.2 220 69.5
MBI17_g30596_MAGBIO Magnolia biondii HOM05D005759 ORTHO05D007172 3.1e-43 179.5 229 46.7
TAR623G0127 Trochodendron aralioides HOM05D005759 ORTHO05D007172 1.5e-42 177.2 224 46.4
Aqoxy1G00957 Aquilegia oxysepala HOM05D005759 ORTHO05D007172 4.2e-40 169.1 223 45.7
Nn2g13981 Nelumbo nucifera HOM05D005759 ORTHO05D007172 4.2e-40 169.1 224 47.3
CSS0028406 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 3.3e-37 159.5 225 46.2
Dinv31290 Davidia involucrata HOM05D005759 ORTHO05D007172 1.0e-33 147.9 225 45.8
Potri.010G234000 Populus trichocarpa HOM05D005759 ORTHO05D007172 1.0e-33 147.9 229 43.7
Sabra10G0181400 Salix brachista HOM05D005759 ORTHO05D007172 1.0e-33 147.9 229 43.2
Actinidia31089 Actinidia chinensis HOM05D005759 ORTHO05D007172 1.7e-33 147.1 224 43.3
Hma1.2p1_0352F.1_g133040 Hydrangea macrophylla HOM05D005759 ORTHO05D007172 2.2e-33 146.7 224 42.9
MD07G1072000 Malus domestica HOM05D005759 ORTHO05D007172 1.1e-32 144.4 226 42.0
Manes.07G091866 Manihot esculenta HOM05D005759 ORTHO05D007172 1.6e-31 140.6 229 40.6
Actinidia34708 Actinidia chinensis HOM05D005759 ORTHO05D007172 2.7e-31 139.8 224 41.1
Gorai.011G232200 Gossypium raimondii HOM05D005759 ORTHO05D007172 7.9e-31 138.3 229 40.6
Cfa011218 Carpinus fangiana HOM05D005759 ORTHO05D007172 1.0e-30 137.9 224 41.5
Gohir.D10G206700 Gossypium hirsutum HOM05D005759 ORTHO05D007172 1.8e-30 137.1 229 40.2
CiPaw.13G035800 Carya illinoinensis HOM05D005759 ORTHO05D007172 3.9e-30 136.0 226 42.5
Thecc.10G099000 Theobroma cacao HOM05D005759 ORTHO05D007172 3.9e-30 136.0 229 41.5
Glyma.02G165400 Glycine max HOM05D005759 ORTHO05D007172 1.9e-29 133.7 224 39.7
Rhsim09G0144200 Rhododendron simsii HOM05D005759 ORTHO05D007172 1.9e-29 133.7 224 40.2
RhsimUnG0061600 Rhododendron simsii HOM05D005759 ORTHO05D007172 1.9e-29 133.7 224 40.2
MD02G1244900 Malus domestica HOM05D005759 ORTHO05D007172 4.3e-29 132.5 226 39.8
Medtr1g050730 Medicago truncatula HOM05D005759 ORTHO05D007172 4.3e-29 132.5 223 39.0
Duzib114G0077 Durio zibethinus HOM05D005759 ORTHO05D007172 9.7e-29 131.3 229 40.2
Phvul.007G245100 Phaseolus vulgaris HOM05D005759 ORTHO05D007172 1.3e-28 131.0 224 41.5
ClCG08G008080 Citrullus lanatus HOM05D005759 ORTHO05D007172 1.8e-27 127.1 229 38.9
Thhalv10016555m.g Eutrema salsugineum HOM05D005759 ORTHO05D007172 2.4e-27 126.7 223 39.5
QL04p040912 Quercus lobata HOM05D005759 ORTHO05D007172 3.1e-27 126.3 224 39.7
Sed0025588 Sechium edule HOM05D005759 ORTHO05D007172 5.3e-27 125.6 233 36.5
CDE04G0943 Ceratophyllum demersum HOM05D005759 ORTHO05D007172 6.9e-27 125.2 225 40.4
Lalb_Chr03g0036351 Lupinus albus HOM05D005759 ORTHO05D007172 6.9e-27 125.2 223 40.8
VMungo0720G2821 Vigna mungo HOM05D005759 ORTHO05D007172 6.9e-27 125.2 224 39.3
Lj5g0004167 Lotus japonicus HOM05D005759 ORTHO05D007172 1.5e-26 124.0 225 36.4
RcHm_v2.0_Chr1g0334181 Rosa chinensis HOM05D005759 ORTHO05D007172 1.5e-26 124.0 226 37.6
THA.LOC104826349 Tarenaya hassleriana HOM05D005759 ORTHO05D007172 1.5e-26 124.0 224 39.7
Haze_02624 Corylus avellana HOM05D005759 ORTHO05D007172 2.6e-26 123.2 254 37.0
MELO3C019880.2 Cucumis melo HOM05D005759 ORTHO05D007172 5.9e-26 122.1 229 37.1
arahy.Tifrunner.gnm1.ann1.0Q505S Arachis hypogaea HOM05D005759 ORTHO05D007172 7.6e-26 121.7 226 36.3
CSS0040532 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 8.5e-25 118.2 192 42.7
Psat6g094520 Pisum sativum HOM05D005759 ORTHO05D007172 8.5e-25 118.2 223 38.6
TPR.G7613 Trifolium pratense HOM05D005759 ORTHO05D007172 1.1e-24 117.9 223 35.9
AL4G23090 Arabidopsis lyrata HOM05D005759 ORTHO05D007172 1.4e-24 117.5 223 37.2
ATR0820G119 Amborella trichopoda HOM05D005759 ORTHO05D007172 3.2e-24 116.3 231 35.5
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 2.1e-23 113.6 224 38.4
AT2G28600 Arabidopsis thaliana HOM05D005759 ORTHO05D007172 2.1e-23 113.6 223 35.9
COL.COLO4_35597 Corchorus olitorius HOM05D005759 ORTHO05D007172 4.6e-23 112.5 226 35.4
A08p00720 Brassica napus HOM05D005759 ORTHO05D007172 1.3e-22 110.9 224 35.3
BraA08t32129Z Brassica rapa HOM05D005759 ORTHO05D007172 1.3e-22 110.9 224 35.3
CARHR121620 Cardamine hirsuta HOM05D005759 ORTHO05D007172 3.9e-22 109.4 223 35.4
Cpa.g.sc720.1 Carica papaya HOM05D005759 ORTHO05D007172 3.9e-22 109.4 197 38.1
BcaB04g16965 Brassica carinata HOM05D005759 ORTHO05D007172 5.1e-22 109.0 224 35.3
Carub.0004s0956 Capsella rubella HOM05D005759 ORTHO05D007172 5.1e-22 109.0 223 36.3
BcaC01g01514 Brassica carinata HOM05D005759 ORTHO05D007172 6.7e-22 108.6 224 34.8
C03p92620 Brassica napus HOM05D005759 ORTHO05D007172 8.7e-22 108.2 224 34.8
BolC3t21576H Brassica oleracea HOM05D005759 ORTHO05D007172 8.7e-22 108.2 224 35.3
Zm00001eb164020 Zea mays HOM05D005759 ORTHO05D007172 9.7e-21 104.8 223 34.1
vmacro10276 Vaccinium macrocarpon HOM05D005759 ORTHO05D007172 1.7e-20 104.0 223 35.0
arahy.Tifrunner.gnm1.ann1.Y61W31 Arachis hypogaea HOM05D005759 ORTHO05D007172 1.5e-18 97.4 191 35.1
Os12g0147500 Oryza sativa ssp. japonica HOM05D005759 ORTHO05D007172 2.0e-18 97.1 219 31.1
CsaV3_2G032950 Cucumis sativus L. HOM05D005759 ORTHO05D007172 1.7e-17 94.0 120 48.3
Atru.chr12.960 Acer truncatum HOM05D005759 ORTHO05D007172 4.2e-16 89.4 143 45.5
PSO339G3253 Papaver somniferum HOM05D005759 ORTHO05D007172 2.1e-15 87.0 102 43.1
TWI38G0593 Tripterygium wilfordii HOM05D005759 ORTHO05D007172 2.1e-15 87.0 119 45.4
GSVIVG01034722001 Vitis vinifera HOM05D005759 ORTHO05D007172 1.0e-14 84.7 108 43.5
PSO384G4559 Papaver somniferum HOM05D005759 ORTHO05D007172 1.8e-14 84.0 102 42.2
GSVIVG01034723001 Vitis vinifera HOM05D005759 ORTHO05D007172 3.0e-14 83.2 109 43.1
CANSAT56G0546 Cannabis sativa HOM05D005759 ORTHO05D007172 1.7e-12 77.4 96 44.8
Eucgr.G02717 Eucalyptus grandis HOM05D005759 ORTHO05D007172 2.2e-12 77.0 134 38.8
Oeu059850.1 Olea europaea HOM05D005759 ORTHO05D007172 3.7e-12 76.3 104 40.4
Ciclev10031564m.g Citrus clementina HOM05D005759 ORTHO05D007172 4.8e-12 75.9 128 40.6
SalBow4G3335 Salvia bowleyana HOM05D005759 ORTHO05D007172 1.4e-11 74.3 67 56.7
Migut.F01660 Erythranthe guttata HOM05D005759 ORTHO05D007172 5.3e-11 72.4 83 44.6
Sp4g11420 Schrenkiella parvula HOM05D005759 ORTHO05D007172 2.0e-10 70.5 191 32.5
Hund06749 Selenicereus undatus HOM05D005759 ORTHO05D007172 3.4e-10 69.7 82 46.3
Prupe.2G090100 Prunus persica HOM05D005759 ORTHO05D007172 4.5e-10 69.3 226 29.6
Mapoly0120s0020 Marchantia polymorpha HOM05D005759 ORTHO05D007172 7.7e-10 68.6 238 28.2
ECA238G2526 Erigeron canadensis HOM05D005759 ORTHO05D007172 1.0e-09 68.2 94 39.4
FAN03G0647 Fragaria x ananassa HOM05D005759 ORTHO05D007172 1.0e-09 68.2 70 45.7
FAN06G0090 Fragaria x ananassa HOM05D005759 ORTHO05D007172 1.0e-09 68.2 70 47.1
Sc06g0002190 Simmondsia chinensis HOM05D005759 ORTHO05D007172 1.7e-09 67.4 79 48.1
DCAR_030749 Daucus carota HOM05D005759 ORTHO05D007172 2.2e-09 67.0 103 39.8
HanXRQChr14g0456321 Helianthus annuus HOM05D005759 ORTHO05D007172 2.2e-09 67.0 92 40.2
FvH4_7g06330 Fragaria vesca HOM05D005759 ORTHO05D007172 2.9e-09 66.6 70 44.3
HPP92_024384 Vanilla planifolia HOM05D005759 ORTHO05D007172 3.8e-09 66.2 103 41.7
MSTRG.409 Avicennia marina HOM05D005759 ORTHO05D007172 5.0e-09 65.9 66 48.5
EL10Ac4g08636 Beta vulgaris HOM05D005759 ORTHO05D007172 8.5e-09 65.1 100 43.0
Cc02_g10290 Coffea canephora HOM05D005759 ORTHO05D007172 1.4e-08 64.3 94 42.6
SGA_v2.0_scaffold62G21347 Striga asiatica HOM05D005759 ORTHO05D007172 1.4e-08 64.3 71 47.9
SalBow6G0601 Salvia bowleyana HOM05D005759 ORTHO05D007172 1.9e-08 63.9 66 45.5
Nn6g35073 Nelumbo nucifera HOM05D005759 ORTHO05D007172 2.5e-08 63.5 189 32.3
Ah.04g163640 Amaranthus hybridus HOM05D005759 ORTHO05D007172 5.5e-08 62.4 82 43.9
SGA_v2.0_scaffold13G06508 Striga asiatica HOM05D005759 ORTHO05D007172 7.2e-08 62.0 66 50.0
Nitab4.5_0010486g0020 Nicotiana tabacum HOM05D005759 ORTHO05D007172 1.2e-07 61.2 119 38.7
Nitab4.5_0002259g0090 Nicotiana tabacum HOM05D005759 ORTHO05D007172 1.6e-07 60.8 119 38.7
AUR62041532 Chenopodium quinoa HOM05D005759 ORTHO05D007172 4.7e-07 59.3 82 41.5
AagrBONN_evm.TU.Sc2ySwM_228.2343 Anthoceros agrestis HOM05D005759 ORTHO05D007172 8.0e-07 58.5 238 28.2
Lsat_1_v5_gn_7_84341 Lactuca sativa HOM05D005759 ORTHO05D007172 8.0e-07 58.5 101 33.7
Solyc11g007610.2 Solanum lycopersicum HOM05D005759 ORTHO05D007172 1.0e-06 58.2 91 40.7
Migut.F00917 Erythranthe guttata HOM05D005759 ORTHO05D007172 2.3e-06 57.0 66 43.9
unitig_899.g14480 Utricularia gibba HOM05D005759 ORTHO05D007172 2.3e-06 57.0 67 38.8
Sopen11g003460 Solanum pennellii HOM05D005759 ORTHO05D007172 3.9e-06 56.2 91 39.6
PGSC0003DMG400027344 Solanum tuberosum HOM05D005759 ORTHO05D007172 8.8e-06 55.1 91 38.5


User provided reference genes

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