Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1829 Papaver somniferum HOM05D003018 ORTHO05D003402 1.5e-101 372.9 185 100.0
PSO339G5858 Papaver somniferum HOM05D003018 ORTHO05D003402 1.9e-24 116.7 149 48.3
PSO339G5652 Papaver somniferum HOM05D003018 ORTHO05D003402 8.2e-20 101.3 197 38.6
PSO339G6351 Papaver somniferum HOM05D003018 ORTHO05D003402 8.2e-20 101.3 160 44.4
PGR142G0210 Punica granatum HOM05D003018 ORTHO05D003402 2.4e-19 99.8 147 42.2
Psat5g071120 Pisum sativum HOM05D003018 ORTHO05D003402 3.1e-19 99.4 149 43.0
Solyc03g079940.3 Solanum lycopersicum HOM05D003018 ORTHO05D003402 4.1e-19 99.0 147 44.2
Sopen03g027480 Solanum pennellii HOM05D003018 ORTHO05D003402 4.1e-19 99.0 147 44.2
Lalb_Chr11g0067561 Lupinus albus HOM05D003018 ORTHO05D003402 5.3e-19 98.6 146 41.1
PSO675G9013 Papaver somniferum HOM05D003018 ORTHO05D003402 5.3e-19 98.6 137 41.6
Glyma.06G139200 Glycine max HOM05D003018 ORTHO05D003402 1.2e-18 97.4 148 41.9
CANSAT21G0709 Cannabis sativa HOM05D003018 ORTHO05D003402 1.6e-18 97.1 146 40.4
Gohir.A12G244400 Gossypium hirsutum HOM05D003018 ORTHO05D003402 1.6e-18 97.1 147 40.1
Gohir.D12G245300 Gossypium hirsutum HOM05D003018 ORTHO05D003402 1.6e-18 97.1 147 40.1
Gorai.008G262900 Gossypium raimondii HOM05D003018 ORTHO05D003402 1.6e-18 97.1 147 40.1
Nitab4.5_0007121g0040 Nicotiana tabacum HOM05D003018 ORTHO05D003402 1.6e-18 97.1 147 44.2
Glyma.04G225600 Glycine max HOM05D003018 ORTHO05D003402 2.0e-18 96.7 147 42.2
MBI07_g11061_MAGBIO Magnolia biondii HOM05D003018 ORTHO05D003402 2.0e-18 96.7 153 41.8
CDE02G1662 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 2.7e-18 96.3 147 40.1
Dinv29191 Davidia involucrata HOM05D003018 ORTHO05D003402 2.7e-18 96.3 147 40.1
Manes.05G197500 Manihot esculenta HOM05D003018 ORTHO05D003402 2.7e-18 96.3 147 41.5
MD07G1303500 Malus domestica HOM05D003018 ORTHO05D003402 3.5e-18 95.9 147 40.8
Oeu017358.1 Olea europaea HOM05D003018 ORTHO05D003402 3.5e-18 95.9 147 40.1
Prupe.2G322200 Prunus persica HOM05D003018 ORTHO05D003402 3.5e-18 95.9 147 39.5
GSVIVG01038683001 Vitis vinifera HOM05D003018 ORTHO05D003402 3.5e-18 95.9 147 41.5
PSO017G1017 Papaver somniferum HOM05D003018 ORTHO05D003402 4.5e-18 95.5 145 43.4
PSO478G2764 Papaver somniferum HOM05D003018 ORTHO05D003402 4.5e-18 95.5 145 43.4
Medtr3g093380 Medicago truncatula HOM05D003018 ORTHO05D003402 5.9e-18 95.1 147 41.5
Actinidia34288 Actinidia chinensis HOM05D003018 ORTHO05D003402 7.7e-18 94.7 146 41.1
Ca_16839_v3 Cicer arietinum L. HOM05D003018 ORTHO05D003402 7.7e-18 94.7 147 42.2
Eucgr.K00480 Eucalyptus grandis HOM05D003018 ORTHO05D003402 7.7e-18 94.7 147 39.5
Lj1g0024936 Lotus japonicus HOM05D003018 ORTHO05D003402 7.7e-18 94.7 147 42.2
ATR0582G341 Amborella trichopoda HOM05D003018 ORTHO05D003402 1.0e-17 94.4 153 40.5
MD01G1231500 Malus domestica HOM05D003018 ORTHO05D003402 1.0e-17 94.4 147 40.1
Actinidia08721 Actinidia chinensis HOM05D003018 ORTHO05D003402 1.3e-17 94.0 146 41.1
Eucgr.A00976 Eucalyptus grandis HOM05D003018 ORTHO05D003402 1.3e-17 94.0 147 41.5
SGA_v2.0_scaffold165G38214 Striga asiatica HOM05D003018 ORTHO05D003402 1.3e-17 94.0 147 40.8
TWI39G0588 Tripterygium wilfordii HOM05D003018 ORTHO05D003402 1.3e-17 94.0 153 40.5
Carub.0006s2250 Capsella rubella HOM05D003018 ORTHO05D003402 1.7e-17 93.6 145 38.6
Duzib068G0518 Durio zibethinus HOM05D003018 ORTHO05D003402 1.7e-17 93.6 147 40.8
arahy.Tifrunner.gnm1.ann1.KA8TW6 Arachis hypogaea HOM05D003018 ORTHO05D003402 2.2e-17 93.2 147 40.1
arahy.Tifrunner.gnm1.ann1.SR3247 Arachis hypogaea HOM05D003018 ORTHO05D003402 2.2e-17 93.2 147 40.1
BcaNung01249 Brassica carinata HOM05D003018 ORTHO05D003402 2.2e-17 93.2 145 37.9
BcaNung02005 Brassica carinata HOM05D003018 ORTHO05D003402 2.9e-17 92.8 145 37.9
C07p43070 Brassica napus HOM05D003018 ORTHO05D003402 2.9e-17 92.8 145 37.9
BolC7t44834H Brassica oleracea HOM05D003018 ORTHO05D003402 2.9e-17 92.8 145 37.9
Dinv17276 Davidia involucrata HOM05D003018 ORTHO05D003402 2.9e-17 92.8 147 39.5
Gohir.A11G017100 Gossypium hirsutum HOM05D003018 ORTHO05D003402 2.9e-17 92.8 147 40.1
Gohir.D11G016900 Gossypium hirsutum HOM05D003018 ORTHO05D003402 2.9e-17 92.8 147 40.1
SalBow4G0431 Salvia bowleyana HOM05D003018 ORTHO05D003402 2.9e-17 92.8 146 41.1
AT5G24650 Arabidopsis thaliana HOM05D003018 ORTHO05D003402 3.8e-17 92.4 145 37.9
A06p35470 Brassica napus HOM05D003018 ORTHO05D003402 3.8e-17 92.4 145 37.9
BraA06t26470Z Brassica rapa HOM05D003018 ORTHO05D003402 3.8e-17 92.4 145 37.9
CSS0041512 Camellia sinensis var. sinensis HOM05D003018 ORTHO05D003402 3.8e-17 92.4 146 40.4
CARHR158570 Cardamine hirsuta HOM05D003018 ORTHO05D003402 3.8e-17 92.4 144 38.2
Lalb_Chr23g0272051 Lupinus albus HOM05D003018 ORTHO05D003402 3.8e-17 92.4 146 40.4
Sp2g22740 Schrenkiella parvula HOM05D003018 ORTHO05D003402 3.8e-17 92.4 145 37.9
PGSC0003DMG400000572 Solanum tuberosum HOM05D003018 ORTHO05D003402 3.8e-17 92.4 150 42.7
TAR374G1266 Trochodendron aralioides HOM05D003018 ORTHO05D003402 3.8e-17 92.4 153 40.5
AL6G36250 Arabidopsis lyrata HOM05D003018 ORTHO05D003402 5.0e-17 92.0 145 37.9
Migut.F00122 Erythranthe guttata HOM05D003018 ORTHO05D003402 5.0e-17 92.0 147 39.5
Thhalv10004788m.g Eutrema salsugineum HOM05D003018 ORTHO05D003402 6.5e-17 91.7 145 37.2
Thecc.03G212100 Theobroma cacao HOM05D003018 ORTHO05D003402 6.5e-17 91.7 147 39.5
Duzib084G0455 Durio zibethinus HOM05D003018 ORTHO05D003402 8.5e-17 91.3 147 39.5
Nn2g15903 Nelumbo nucifera HOM05D003018 ORTHO05D003402 8.5e-17 91.3 147 40.1
PSO339G1467 Papaver somniferum HOM05D003018 ORTHO05D003402 8.5e-17 91.3 109 52.3
Potri.015G000600 Populus trichocarpa HOM05D003018 ORTHO05D003402 8.5e-17 91.3 147 38.8
TPR.G35918 Trifolium pratense HOM05D003018 ORTHO05D003402 8.5e-17 91.3 142 38.0
Gohir.A09G187100 Gossypium hirsutum HOM05D003018 ORTHO05D003402 1.1e-16 90.9 152 38.8
PSO832G1145 Papaver somniferum HOM05D003018 ORTHO05D003402 1.1e-16 90.9 143 43.4
CAN.G303.60 Capsicum annuum HOM05D003018 ORTHO05D003402 1.5e-16 90.5 147 42.2
CiPaw.06G038200 Carya illinoinensis HOM05D003018 ORTHO05D003402 1.5e-16 90.5 147 38.8
Gorai.006G203900 Gossypium raimondii HOM05D003018 ORTHO05D003402 1.5e-16 90.5 151 37.1
Potri.012G004600 Populus trichocarpa HOM05D003018 ORTHO05D003402 1.5e-16 90.5 147 38.8
Phvul.009G040400 Phaseolus vulgaris HOM05D003018 ORTHO05D003402 1.9e-16 90.1 146 39.7
PGR042G2079 Punica granatum HOM05D003018 ORTHO05D003402 1.9e-16 90.1 147 39.5
Sp5g12550 Schrenkiella parvula HOM05D003018 ORTHO05D003402 1.9e-16 90.1 144 37.5
BcaB01g00697 Brassica carinata HOM05D003018 ORTHO05D003402 2.5e-16 89.7 144 37.5
DCAR_010557 Daucus carota HOM05D003018 ORTHO05D003402 2.5e-16 89.7 155 38.7
Thhalv10010930m.g Eutrema salsugineum HOM05D003018 ORTHO05D003402 2.5e-16 89.7 144 37.5
VMungo1309G0595 Vigna mungo HOM05D003018 ORTHO05D003402 2.5e-16 89.7 146 39.0
MSTRG.26952 Avicennia marina HOM05D003018 ORTHO05D003402 3.2e-16 89.4 146 39.0
Migut.F00968 Erythranthe guttata HOM05D003018 ORTHO05D003402 3.2e-16 89.4 152 38.8
RcHm_v2.0_Chr1g0383311 Rosa chinensis HOM05D003018 ORTHO05D003402 3.2e-16 89.4 148 38.5
THA.LOC104798993 Tarenaya hassleriana HOM05D003018 ORTHO05D003402 3.2e-16 89.4 145 36.6
CsaV3_5G000150 Cucumis sativus L. HOM05D003018 ORTHO05D003402 4.2e-16 89.0 147 38.8
Duzib205G1477 Durio zibethinus HOM05D003018 ORTHO05D003402 4.2e-16 89.0 147 38.8
Aa31LG11G3900 Aethionema arabicum HOM05D003018 ORTHO05D003402 5.5e-16 88.6 144 36.8
CARHR188810 Cardamine hirsuta HOM05D003018 ORTHO05D003402 5.5e-16 88.6 145 37.2
CiPaw.05G208700 Carya illinoinensis HOM05D003018 ORTHO05D003402 5.5e-16 88.6 148 37.2
HanXRQChr10g0283991 Helianthus annuus HOM05D003018 ORTHO05D003402 5.5e-16 88.6 146 38.4
HanXRQChr16g0499771 Helianthus annuus HOM05D003018 ORTHO05D003402 5.5e-16 88.6 146 38.4
Lj3C891T18 Lonicera japonica HOM05D003018 ORTHO05D003402 5.5e-16 88.6 147 38.1
HPP92_007053 Vanilla planifolia HOM05D003018 ORTHO05D003402 5.5e-16 88.6 147 38.8
Os04g0405100 Oryza sativa ssp. japonica HOM05D003018 ORTHO05D003402 7.2e-16 88.2 147 38.8
ECA232G4756 Erigeron canadensis HOM05D003018 ORTHO05D003402 1.2e-15 87.4 146 37.7
Aqoxy5G02912 Aquilegia oxysepala HOM05D003018 ORTHO05D003402 1.6e-15 87.0 147 38.1
BcaC07g39417 Brassica carinata HOM05D003018 ORTHO05D003402 1.6e-15 87.0 143 37.1
CDE06G0409 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 2.1e-15 86.7 147 38.1
FAN10G1538 Fragaria x ananassa HOM05D003018 ORTHO05D003402 2.1e-15 86.7 148 38.5
Sed0009908 Sechium edule HOM05D003018 ORTHO05D003402 2.1e-15 86.7 147 37.4
AL5G29400 Arabidopsis lyrata HOM05D003018 ORTHO05D003402 3.6e-15 85.9 144 36.1
FAN01G2324 Fragaria x ananassa HOM05D003018 ORTHO05D003402 3.6e-15 85.9 149 38.3
A06p18200 Brassica napus HOM05D003018 ORTHO05D003402 6.1e-15 85.1 150 36.7
BraA06t24904Z Brassica rapa HOM05D003018 ORTHO05D003402 6.1e-15 85.1 150 36.7
FAN10G3922 Fragaria x ananassa HOM05D003018 ORTHO05D003402 6.1e-15 85.1 148 37.8
Zm00001eb242440 Zea mays HOM05D003018 ORTHO05D003402 6.1e-15 85.1 147 38.1
C08p24540 Brassica napus HOM05D003018 ORTHO05D003402 8.0e-15 84.7 150 36.7
BolC8t50072H Brassica oleracea HOM05D003018 ORTHO05D003402 8.0e-15 84.7 150 36.7
PSO729G0279 Papaver somniferum HOM05D003018 ORTHO05D003402 8.0e-15 84.7 156 35.9
Aa31LG4G18050 Aethionema arabicum HOM05D003018 ORTHO05D003402 1.0e-14 84.3 144 35.4
AT3G49560 Arabidopsis thaliana HOM05D003018 ORTHO05D003402 1.0e-14 84.3 144 35.4
FvH4_7g33330 Fragaria vesca HOM05D003018 ORTHO05D003402 1.0e-14 84.3 149 37.6
FAN03G3459 Fragaria x ananassa HOM05D003018 ORTHO05D003402 1.4e-14 84.0 149 37.6
Peaxi162Scf01026g00260 Petunia axillaris HOM05D003018 ORTHO05D003402 1.4e-14 84.0 158 38.0
Carub.0005s1589 Capsella rubella HOM05D003018 ORTHO05D003402 1.8e-14 83.6 144 35.4
QL09p005993 Quercus lobata HOM05D003018 ORTHO05D003402 2.3e-14 83.2 159 37.1
Sed0018717 Sechium edule HOM05D003018 ORTHO05D003402 2.3e-14 83.2 149 36.9
Atru.chr12.2524 Acer truncatum HOM05D003018 ORTHO05D003402 3.0e-14 82.8 146 34.2
AUR62028118 Chenopodium quinoa HOM05D003018 ORTHO05D003402 3.0e-14 82.8 147 36.7
Ciclev10021773m.g Citrus clementina HOM05D003018 ORTHO05D003402 3.0e-14 82.8 192 32.3
AUR62005947 Chenopodium quinoa HOM05D003018 ORTHO05D003402 4.0e-14 82.4 147 36.7
Lalb_Chr08g0239401 Lupinus albus HOM05D003018 ORTHO05D003402 4.0e-14 82.4 77 57.1
Mapoly0083s0018 Marchantia polymorpha HOM05D003018 ORTHO05D003402 4.0e-14 82.4 154 38.3
PSO339G1784 Papaver somniferum HOM05D003018 ORTHO05D003402 4.0e-14 82.4 156 38.5
vmacro06475 Vaccinium macrocarpon HOM05D003018 ORTHO05D003402 4.0e-14 82.4 167 36.5
Eucgr.K00528 Eucalyptus grandis HOM05D003018 ORTHO05D003402 6.8e-14 81.6 77 55.8
SEGI_14341 Sequoiadendron giganteum HOM05D003018 ORTHO05D003402 6.8e-14 81.6 77 55.8
THA.LOC104814958 Tarenaya hassleriana HOM05D003018 ORTHO05D003402 8.8e-14 81.3 145 33.8
Sc19g0000360 Simmondsia chinensis HOM05D003018 ORTHO05D003402 1.2e-13 80.9 147 36.1
EL10Ac3g05130 Beta vulgaris HOM05D003018 ORTHO05D003402 2.0e-13 80.1 148 36.5
BolC7t43940H Brassica oleracea HOM05D003018 ORTHO05D003402 2.0e-13 80.1 155 36.8
PSO017G0083 Papaver somniferum HOM05D003018 ORTHO05D003402 2.0e-13 80.1 147 36.1
Zm00001eb181270 Zea mays HOM05D003018 ORTHO05D003402 2.0e-13 80.1 146 34.9
BcaC06g31152 Brassica carinata HOM05D003018 ORTHO05D003402 2.6e-13 79.7 155 36.8
C07p34140 Brassica napus HOM05D003018 ORTHO05D003402 2.6e-13 79.7 155 36.8
BolC7t43927H Brassica oleracea HOM05D003018 ORTHO05D003402 2.6e-13 79.7 155 36.8
unitig_62.g23859 Utricularia gibba HOM05D003018 ORTHO05D003402 3.4e-13 79.3 138 38.4
Zm00001eb084410 Zea mays HOM05D003018 ORTHO05D003402 5.7e-13 78.6 146 35.6
CiPaw.05G209100 Carya illinoinensis HOM05D003018 ORTHO05D003402 7.5e-13 78.2 77 54.5
C08p05060 Brassica napus HOM05D003018 ORTHO05D003402 9.8e-13 77.8 68 57.4
unitig_64.g29776 Utricularia gibba HOM05D000525 ORTHO05D001368 9.8e-13 77.8 136 38.2
SMO356G0102 Selaginella moellendorffii HOM05D003018 ORTHO05D003402 2.8e-12 76.3 143 37.1
BcaC06g31154 Brassica carinata HOM05D003018 ORTHO05D032594 4.8e-12 75.5 67 53.7
C07p34120 Brassica napus HOM05D003018 ORTHO05D032594 4.8e-12 75.5 67 53.7
BolC7t43926H Brassica oleracea HOM05D003018 ORTHO05D032594 4.8e-12 75.5 67 53.7
A06p42880 Brassica napus HOM05D003018 ORTHO05D003402 1.1e-11 74.3 155 34.2
BraA06t27200Z Brassica rapa HOM05D003018 ORTHO05D003402 1.1e-11 74.3 155 34.2
ClCG01G000020 Citrullus lanatus HOM05D003018 ORTHO05D003402 1.1e-11 74.3 119 36.1
BcaB08g34602 Brassica carinata HOM05D003018 ORTHO05D003402 1.4e-11 73.9 149 36.2
Pp3c25_7060 Physcomitrium patens HOM05D003018 ORTHO05D003402 1.4e-11 73.9 147 36.1
unitig_52.g16865 Utricularia gibba HOM05D003018 ORTHO05D003402 1.4e-11 73.9 70 55.7
Lsat_1_v5_gn_2_3400 Lactuca sativa HOM05D003018 ORTHO05D003402 1.8e-11 73.6 153 34.6
Nitab4.5_0000021g0210 Nicotiana tabacum HOM05D003018 ORTHO05D003402 1.8e-11 73.6 225 31.6
Hma1.2p1_0115F.1_g055830 Hydrangea macrophylla HOM05D003018 ORTHO05D003402 2.4e-11 73.2 77 51.9
PSO729G0102 Papaver somniferum HOM05D003018 ORTHO05D003402 3.1e-11 72.8 66 54.5
BcaC06g31150 Brassica carinata HOM05D003018 ORTHO05D003402 5.4e-11 72.0 61 57.4
C07p34160 Brassica napus HOM05D003018 ORTHO05D003402 5.4e-11 72.0 61 57.4
BolC7t43931H Brassica oleracea HOM05D003018 ORTHO05D003402 5.4e-11 72.0 61 57.4
Sabra15G0000400 Salix brachista HOM05D003018 ORTHO05D003402 1.2e-10 70.9 125 36.0
BcaC06g31155 Brassica carinata HOM05D003018 ORTHO05D003402 1.6e-10 70.5 61 55.7
BolC7t43925H Brassica oleracea HOM05D003018 ORTHO05D003402 1.6e-10 70.5 61 55.7
TAR375G0624 Trochodendron aralioides HOM05D003018 ORTHO05D003402 2.7e-10 69.7 133 36.1
A06p42910 Brassica napus HOM05D003018 ORTHO05D003402 3.5e-10 69.3 61 54.1
Haze_00335 Corylus avellana HOM05D003018 ORTHO05D003402 5.9e-10 68.6 165 32.7
Lsat_1_v5_gn_0_9661 Lactuca sativa HOM05D003018 ORTHO05D003402 5.9e-10 68.6 146 32.9
vmacro06209 Vaccinium macrocarpon HOM05D003018 ORTHO05D003502 7.7e-10 68.2 57 56.1
Cc02_g00590 Coffea canephora HOM05D003018 ORTHO05D003402 1.0e-09 67.8 147 34.7
Pp3c16_18310 Physcomitrium patens HOM05D025156 ORTHO05D003402 1.0e-09 67.8 87 44.8
MELO3C005915.2 Cucumis melo HOM05D003018 ORTHO05D003402 1.7e-09 67.0 125 36.0
DCAR_014570 Daucus carota HOM05D006062 ORTHO05D007613 2.3e-09 66.6 105 40.0
Rhsim03G0218500 Rhododendron simsii HOM05D003018 ORTHO05D003402 5.0e-09 65.5 147 34.7
Atru.chr12.2500 Acer truncatum HOM05D003018 ORTHO05D003402 6.5e-09 65.1 124 32.3
MCO01G667 Micromonas commoda HOM05D003018 ORTHO05D003402 9.5e-08 61.2 75 40.0
Cpa.g.sc3.188 Carica papaya HOM05D003018 ORTHO05D003402 1.6e-07 60.5 65 52.3
ECA232G1833 Erigeron canadensis HOM05D000455 ORTHO05D000434 2.1e-07 60.1 152 30.9
CBR_g48001 Chara braunii HOM05D003018 ORTHO05D003402 1.8e-06 57.0 49 57.1
ClCG00G004180 Citrullus lanatus HOM05D003018 ORTHO05D003402 1.8e-06 57.0 55 52.7
PSO782G4498 Papaver somniferum HOM05D003018 ORTHO05D003402 1.8e-06 57.0 130 32.3
Ah.13g071050 Amaranthus hybridus HOM05D003018 ORTHO05D003402 3.0e-06 56.2 147 30.6
C07p34110 Brassica napus HOM05D003018 ORTHO05D003402 3.0e-06 56.2 87 39.1


User provided reference genes

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