Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1467 Papaver somniferum HOM05D003018 ORTHO05D003402 7.7e-86 320.5 165 100.0
PSO339G5858 Papaver somniferum HOM05D003018 ORTHO05D003402 2.9e-24 115.9 169 47.9
Peaxi162Scf01026g00260 Petunia axillaris HOM05D003018 ORTHO05D003402 1.0e-21 107.5 162 40.7
PSO339G5652 Papaver somniferum HOM05D003018 ORTHO05D003402 1.3e-21 107.1 170 43.5
PSO384G5006 Papaver somniferum HOM05D003018 ORTHO05D003402 2.1e-19 99.8 117 49.6
Nitab4.5_0000021g0210 Nicotiana tabacum HOM05D003018 ORTHO05D003402 3.1e-18 95.9 153 40.5
CAN.G303.60 Capsicum annuum HOM05D003018 ORTHO05D003402 4.0e-18 95.5 106 45.3
PGR142G0210 Punica granatum HOM05D003018 ORTHO05D003402 4.0e-18 95.5 185 34.6
PGSC0003DMG400000572 Solanum tuberosum HOM05D003018 ORTHO05D003402 4.0e-18 95.5 106 45.3
Nitab4.5_0007121g0040 Nicotiana tabacum HOM05D003018 ORTHO05D003402 1.2e-17 94.0 104 46.2
Lj1g0024936 Lotus japonicus HOM05D003018 ORTHO05D003402 3.4e-17 92.4 110 40.9
PSO339G2603 Papaver somniferum HOM05D003018 ORTHO05D003402 3.4e-17 92.4 143 44.8
Gohir.A09G187100 Gossypium hirsutum HOM05D003018 ORTHO05D003402 4.5e-17 92.0 184 33.2
Gorai.006G203900 Gossypium raimondii HOM05D003018 ORTHO05D003402 4.5e-17 92.0 188 33.0
Solyc03g079940.3 Solanum lycopersicum HOM05D003018 ORTHO05D003402 4.5e-17 92.0 104 44.2
Sopen03g027480 Solanum pennellii HOM05D003018 ORTHO05D003402 4.5e-17 92.0 104 44.2
Sabra15G0000400 Salix brachista HOM05D003018 ORTHO05D003402 7.6e-17 91.3 113 44.2
vmacro06475 Vaccinium macrocarpon HOM05D003018 ORTHO05D003402 1.3e-16 90.5 188 33.5
CANSAT21G0709 Cannabis sativa HOM05D003018 ORTHO05D003402 1.7e-16 90.1 185 33.0
PSO339G1829 Papaver somniferum HOM05D003018 ORTHO05D003402 2.2e-16 89.7 109 52.3
SGA_v2.0_scaffold165G38214 Striga asiatica HOM05D003018 ORTHO05D003402 2.2e-16 89.7 186 33.3
TAR375G0624 Trochodendron aralioides HOM05D003018 ORTHO05D003402 2.2e-16 89.7 186 34.4
PSO017G1017 Papaver somniferum HOM05D003018 ORTHO05D003402 2.9e-16 89.4 104 45.2
PSO478G2764 Papaver somniferum HOM05D003018 ORTHO05D003402 2.9e-16 89.4 104 45.2
CSS0041512 Camellia sinensis var. sinensis HOM05D003018 ORTHO05D003402 3.8e-16 89.0 187 33.2
MELO3C005915.2 Cucumis melo HOM05D003018 ORTHO05D003402 3.8e-16 89.0 185 34.1
Duzib205G1477 Durio zibethinus HOM05D003018 ORTHO05D003402 3.8e-16 89.0 185 33.5
Glyma.04G225600 Glycine max HOM05D003018 ORTHO05D003402 3.8e-16 89.0 104 42.3
Gohir.D12G245300 Gossypium hirsutum HOM05D003018 ORTHO05D003402 3.8e-16 89.0 185 34.6
Gorai.008G262900 Gossypium raimondii HOM05D003018 ORTHO05D003402 3.8e-16 89.0 185 34.6
Lalb_Chr11g0067561 Lupinus albus HOM05D003018 ORTHO05D003402 3.8e-16 89.0 186 32.3
Potri.015G000600 Populus trichocarpa HOM05D003018 ORTHO05D003402 3.8e-16 89.0 104 45.2
TAR374G1266 Trochodendron aralioides HOM05D003018 ORTHO05D003402 3.8e-16 89.0 186 34.9
Dinv17276 Davidia involucrata HOM05D003018 ORTHO05D003402 4.9e-16 88.6 187 33.7
Gohir.A12G244400 Gossypium hirsutum HOM05D003018 ORTHO05D003402 4.9e-16 88.6 185 34.1
Actinidia34288 Actinidia chinensis HOM05D003018 ORTHO05D003402 6.4e-16 88.2 186 34.4
Gohir.A11G017100 Gossypium hirsutum HOM05D003018 ORTHO05D003402 6.4e-16 88.2 104 42.3
Gohir.D11G016900 Gossypium hirsutum HOM05D003018 ORTHO05D003402 6.4e-16 88.2 104 42.3
CsaV3_5G000150 Cucumis sativus L. HOM05D003018 ORTHO05D003402 8.4e-16 87.8 110 40.9
Duzib084G0455 Durio zibethinus HOM05D003018 ORTHO05D003402 8.4e-16 87.8 185 33.5
Eucgr.K00480 Eucalyptus grandis HOM05D003018 ORTHO05D003402 8.4e-16 87.8 185 33.5
Medtr3g093380 Medicago truncatula HOM05D003018 ORTHO05D003402 8.4e-16 87.8 110 40.0
Atru.chr12.2500 Acer truncatum HOM05D003018 ORTHO05D003402 1.4e-15 87.0 187 33.2
Aqoxy5G02912 Aquilegia oxysepala HOM05D003018 ORTHO05D003402 1.4e-15 87.0 104 42.3
Ca_16839_v3 Cicer arietinum L. HOM05D003018 ORTHO05D003402 1.4e-15 87.0 104 42.3
Glyma.06G139200 Glycine max HOM05D003018 ORTHO05D003402 1.4e-15 87.0 104 41.3
PGR042G2079 Punica granatum HOM05D003018 ORTHO05D003402 1.4e-15 87.0 184 34.2
QL09p005993 Quercus lobata HOM05D003018 ORTHO05D003402 1.4e-15 87.0 190 33.7
GSVIVG01038683001 Vitis vinifera HOM05D003018 ORTHO05D003402 1.4e-15 87.0 104 43.3
DCAR_010557 Daucus carota HOM05D003018 ORTHO05D003402 1.9e-15 86.7 110 41.8
Duzib068G0518 Durio zibethinus HOM05D003018 ORTHO05D003402 1.9e-15 86.7 104 42.3
ECA232G4756 Erigeron canadensis HOM05D003018 ORTHO05D003402 1.9e-15 86.7 110 40.9
Eucgr.A00976 Eucalyptus grandis HOM05D003018 ORTHO05D003402 1.9e-15 86.7 104 42.3
HanXRQChr10g0283991 Helianthus annuus HOM05D003018 ORTHO05D003402 1.9e-15 86.7 184 34.2
HanXRQChr16g0499771 Helianthus annuus HOM05D003018 ORTHO05D003402 1.9e-15 86.7 184 34.2
Nn2g15903 Nelumbo nucifera HOM05D003018 ORTHO05D003402 1.9e-15 86.7 185 34.6
Oeu017358.1 Olea europaea HOM05D003018 ORTHO05D003402 1.9e-15 86.7 104 43.3
Actinidia08721 Actinidia chinensis HOM05D003018 ORTHO05D003402 2.4e-15 86.3 186 34.9
MD07G1303500 Malus domestica HOM05D003018 ORTHO05D003402 2.4e-15 86.3 186 33.3
PSO339G6351 Papaver somniferum HOM05D003018 ORTHO05D003402 2.4e-15 86.3 166 40.4
CiPaw.06G038200 Carya illinoinensis HOM05D003018 ORTHO05D003402 3.2e-15 85.9 104 43.3
Dinv29191 Davidia involucrata HOM05D003018 ORTHO05D003402 3.2e-15 85.9 187 32.6
Migut.F00968 Erythranthe guttata HOM05D003018 ORTHO05D003402 3.2e-15 85.9 104 41.3
arahy.Tifrunner.gnm1.ann1.KA8TW6 Arachis hypogaea HOM05D003018 ORTHO05D003402 4.2e-15 85.5 104 40.4
arahy.Tifrunner.gnm1.ann1.SR3247 Arachis hypogaea HOM05D003018 ORTHO05D003402 4.2e-15 85.5 104 40.4
MSTRG.26952 Avicennia marina HOM05D003018 ORTHO05D003402 4.2e-15 85.5 104 42.3
MD01G1231500 Malus domestica HOM05D003018 ORTHO05D003402 4.2e-15 85.5 186 32.8
Thecc.03G212100 Theobroma cacao HOM05D003018 ORTHO05D003402 4.2e-15 85.5 184 33.2
ATR0582G341 Amborella trichopoda HOM05D003018 ORTHO05D003402 5.5e-15 85.1 104 42.3
Phvul.009G040400 Phaseolus vulgaris HOM05D003018 ORTHO05D003402 5.5e-15 85.1 124 38.7
Potri.012G004600 Populus trichocarpa HOM05D003018 ORTHO05D003402 5.5e-15 85.1 104 44.2
Prupe.2G322200 Prunus persica HOM05D003018 ORTHO05D003402 5.5e-15 85.1 186 33.3
VMungo1309G0595 Vigna mungo HOM05D003018 ORTHO05D003402 5.5e-15 85.1 186 31.2
Atru.chr12.2524 Acer truncatum HOM05D003018 ORTHO05D003402 7.1e-15 84.7 185 33.0
unitig_62.g23859 Utricularia gibba HOM05D003018 ORTHO05D003402 7.1e-15 84.7 104 40.4
unitig_64.g29776 Utricularia gibba HOM05D000525 ORTHO05D001368 7.1e-15 84.7 104 40.4
SalBow4G0431 Salvia bowleyana HOM05D003018 ORTHO05D003402 9.3e-15 84.3 104 39.4
Sed0009908 Sechium edule HOM05D003018 ORTHO05D003402 9.3e-15 84.3 184 32.6
TWI39G0588 Tripterygium wilfordii HOM05D003018 ORTHO05D003402 9.3e-15 84.3 124 39.5
PSO832G1145 Papaver somniferum HOM05D003018 ORTHO05D003402 1.2e-14 84.0 110 43.6
Migut.F00122 Erythranthe guttata HOM05D003018 ORTHO05D003402 1.6e-14 83.6 104 40.4
Manes.05G197500 Manihot esculenta HOM05D003018 ORTHO05D003402 2.7e-14 82.8 104 41.3
Sed0018717 Sechium edule HOM05D003018 ORTHO05D003402 2.7e-14 82.8 112 41.1
Zm00001eb242440 Zea mays HOM05D003018 ORTHO05D003402 2.7e-14 82.8 104 40.4
Lj3C891T18 Lonicera japonica HOM05D003018 ORTHO05D003402 4.6e-14 82.0 104 42.3
Lalb_Chr23g0272051 Lupinus albus HOM05D003018 ORTHO05D003402 4.6e-14 82.0 186 30.6
HPP92_007053 Vanilla planifolia HOM05D003018 ORTHO05D003402 4.6e-14 82.0 104 40.4
Sc19g0000360 Simmondsia chinensis HOM05D003018 ORTHO05D003402 7.9e-14 81.3 104 39.4
SEGI_14341 Sequoiadendron giganteum HOM05D003018 ORTHO05D003402 1.0e-13 80.9 105 41.9
Cpa.g.sc3.188 Carica papaya HOM05D003018 ORTHO05D003402 1.8e-13 80.1 94 44.7
CiPaw.05G208700 Carya illinoinensis HOM05D003018 ORTHO05D003402 1.8e-13 80.1 112 39.3
CDE02G1662 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 1.8e-13 80.1 185 31.9
Lsat_1_v5_gn_2_3400 Lactuca sativa HOM05D003018 ORTHO05D003402 1.8e-13 80.1 107 40.2
Ah.13g071050 Amaranthus hybridus HOM05D003018 ORTHO05D003402 2.3e-13 79.7 179 30.7
MBI07_g11061_MAGBIO Magnolia biondii HOM05D003018 ORTHO05D003402 2.3e-13 79.7 186 34.4
Psat5g071120 Pisum sativum HOM05D003018 ORTHO05D003402 2.3e-13 79.7 160 32.5
Zm00001eb084410 Zea mays HOM05D003018 ORTHO05D003402 2.3e-13 79.7 107 39.3
AUR62028118 Chenopodium quinoa HOM05D003018 ORTHO05D003402 3.0e-13 79.3 187 29.9
Lsat_1_v5_gn_0_9661 Lactuca sativa HOM05D003018 ORTHO05D003402 3.0e-13 79.3 180 33.3
Os04g0405100 Oryza sativa ssp. japonica HOM05D003018 ORTHO05D003402 3.0e-13 79.3 104 39.4
AUR62005947 Chenopodium quinoa HOM05D003018 ORTHO05D003402 6.7e-13 78.2 187 30.5
Zm00001eb181270 Zea mays HOM05D003018 ORTHO05D003402 6.7e-13 78.2 104 38.5
BcaNung01249 Brassica carinata HOM05D003018 ORTHO05D003402 1.1e-12 77.4 166 34.3
CDE06G0409 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 2.5e-12 76.3 104 38.5
Ciclev10021773m.g Citrus clementina HOM05D003018 ORTHO05D003402 2.5e-12 76.3 107 41.1
Cc02_g00590 Coffea canephora HOM05D003018 ORTHO05D003402 2.5e-12 76.3 97 42.3
Rhsim03G0218500 Rhododendron simsii HOM05D003018 ORTHO05D003402 3.3e-12 75.9 178 32.0
TPR.G35918 Trifolium pratense HOM05D003018 ORTHO05D003402 3.3e-12 75.9 104 38.5
EL10Ac3g05130 Beta vulgaris HOM05D003018 ORTHO05D003402 4.3e-12 75.5 106 35.8
ClCG00G004180 Citrullus lanatus HOM05D003018 ORTHO05D003402 4.3e-12 75.5 94 42.6
FAN10G1538 Fragaria x ananassa HOM05D003018 ORTHO05D003402 4.3e-12 75.5 106 39.6
CARHR188810 Cardamine hirsuta HOM05D003018 ORTHO05D003402 5.6e-12 75.1 105 42.9
RcHm_v2.0_Chr1g0383311 Rosa chinensis HOM05D003018 ORTHO05D003402 5.6e-12 75.1 106 38.7
A06p35470 Brassica napus HOM05D003018 ORTHO05D003402 7.4e-12 74.7 178 32.6
BraA06t26470Z Brassica rapa HOM05D003018 ORTHO05D003402 7.4e-12 74.7 178 32.6
Lalb_Chr08g0239401 Lupinus albus HOM05D003018 ORTHO05D003402 7.4e-12 74.7 91 42.9
PSO675G9013 Papaver somniferum HOM05D003018 ORTHO05D003402 7.4e-12 74.7 170 34.7
THA.LOC104798993 Tarenaya hassleriana HOM05D003018 ORTHO05D003402 7.4e-12 74.7 105 41.9
Aa31LG11G3900 Aethionema arabicum HOM05D003018 ORTHO05D003402 9.6e-12 74.3 179 31.8
FAN10G3922 Fragaria x ananassa HOM05D003018 ORTHO05D003402 1.3e-11 73.9 106 38.7
Sp2g22740 Schrenkiella parvula HOM05D003018 ORTHO05D003402 1.3e-11 73.9 105 41.0
FvH4_7g33330 Fragaria vesca HOM05D003018 ORTHO05D003402 1.6e-11 73.6 106 38.7
FAN03G3459 Fragaria x ananassa HOM05D003018 ORTHO05D003402 1.6e-11 73.6 106 38.7
THA.LOC104814958 Tarenaya hassleriana HOM05D003018 ORTHO05D003402 1.6e-11 73.6 105 41.0
BcaNung02005 Brassica carinata HOM05D003018 ORTHO05D003402 2.1e-11 73.2 178 32.0
C07p43070 Brassica napus HOM05D003018 ORTHO05D003402 2.1e-11 73.2 178 32.0
BolC7t44834H Brassica oleracea HOM05D003018 ORTHO05D003402 2.1e-11 73.2 178 32.0
FAN01G2324 Fragaria x ananassa HOM05D003018 ORTHO05D003402 2.1e-11 73.2 106 38.7
AL6G36250 Arabidopsis lyrata HOM05D003018 ORTHO05D003402 2.8e-11 72.8 178 32.6
AT5G24650 Arabidopsis thaliana HOM05D003018 ORTHO05D003402 2.8e-11 72.8 178 32.6
Carub.0006s2250 Capsella rubella HOM05D003018 ORTHO05D003402 2.8e-11 72.8 178 32.6
Thhalv10004788m.g Eutrema salsugineum HOM05D003018 ORTHO05D003402 2.8e-11 72.8 105 41.0
Pp3c25_7060 Physcomitrium patens HOM05D003018 ORTHO05D003402 2.8e-11 72.8 111 36.0
ECA248G2250 Erigeron canadensis HOM05D003018 ORTHO05D003402 3.7e-11 72.4 114 40.4
Carub.0005s1589 Capsella rubella HOM05D003018 ORTHO05D003402 6.2e-11 71.6 111 39.6
SMO356G0102 Selaginella moellendorffii HOM05D003018 ORTHO05D003402 6.2e-11 71.6 190 29.5
AL5G29400 Arabidopsis lyrata HOM05D003018 ORTHO05D003402 8.1e-11 71.2 111 39.6
CARHR158570 Cardamine hirsuta HOM05D003018 ORTHO05D003402 8.1e-11 71.2 111 38.7
Eucgr.K00528 Eucalyptus grandis HOM05D003018 ORTHO05D003402 1.8e-10 70.1 91 40.7
unitig_52.g16865 Utricularia gibba HOM05D003018 ORTHO05D003402 1.8e-10 70.1 180 31.1
AT3G49560 Arabidopsis thaliana HOM05D003018 ORTHO05D003402 2.4e-10 69.7 111 38.7
Sp5g12550 Schrenkiella parvula HOM05D003018 ORTHO05D003402 2.4e-10 69.7 111 38.7
Aa31LG4G18050 Aethionema arabicum HOM05D003018 ORTHO05D003402 5.3e-10 68.6 105 40.0
PSO339G1784 Papaver somniferum HOM05D003018 ORTHO05D003402 9.0e-10 67.8 173 34.7
PSO782G4498 Papaver somniferum HOM05D003018 ORTHO05D003402 9.0e-10 67.8 174 35.1
Thhalv10010930m.g Eutrema salsugineum HOM05D003018 ORTHO05D003402 1.2e-09 67.4 182 29.7
BcaB01g00697 Brassica carinata HOM05D003018 ORTHO05D003402 1.5e-09 67.0 177 30.5
Haze_00335 Corylus avellana HOM05D003018 ORTHO05D003402 1.5e-09 67.0 137 32.8
Hma1.2p1_0115F.1_g055830 Hydrangea macrophylla HOM05D003018 ORTHO05D003402 1.5e-09 67.0 91 40.7
Mapoly0083s0018 Marchantia polymorpha HOM05D003018 ORTHO05D003402 2.6e-09 66.2 111 34.2
BcaC06g31155 Brassica carinata HOM05D003018 ORTHO05D003402 5.8e-09 65.1 118 35.6
PSO729G0279 Papaver somniferum HOM05D003018 ORTHO05D003402 7.6e-09 64.7 171 35.1
C08p24540 Brassica napus HOM05D003018 ORTHO05D003402 1.0e-08 64.3 115 37.4
BolC8t50072H Brassica oleracea HOM05D003018 ORTHO05D003402 1.0e-08 64.3 115 37.4
ECA232G1833 Erigeron canadensis HOM05D000455 ORTHO05D000434 1.0e-08 64.3 119 39.5
BcaC07g39417 Brassica carinata HOM05D003018 ORTHO05D003402 1.3e-08 63.9 111 38.7
C07p34110 Brassica napus HOM05D003018 ORTHO05D003402 1.3e-08 63.9 116 36.2
ECA248G1111 Erigeron canadensis HOM05D001208 ORTHO05D001593 1.3e-08 63.9 92 40.2
BolC7t43925H Brassica oleracea HOM05D003018 ORTHO05D003402 1.7e-08 63.5 122 34.4
A06p18200 Brassica napus HOM05D003018 ORTHO05D003402 2.2e-08 63.2 115 37.4
BraA06t24904Z Brassica rapa HOM05D003018 ORTHO05D003402 2.2e-08 63.2 115 37.4
PSO017G0083 Papaver somniferum HOM05D003018 ORTHO05D003402 4.9e-08 62.0 111 38.7
BolC7t43940H Brassica oleracea HOM05D003018 ORTHO05D003402 2.5e-07 59.7 164 29.3
BcaC06g31152 Brassica carinata HOM05D003018 ORTHO05D003402 4.2e-07 58.9 164 29.3
C07p34140 Brassica napus HOM05D003018 ORTHO05D003402 4.2e-07 58.9 164 29.3
BolC7t43927H Brassica oleracea HOM05D003018 ORTHO05D003402 4.2e-07 58.9 164 29.3
PSO339G5543 Papaver somniferum HOM05D003018 ORTHO05D003402 4.2e-07 58.9 123 40.7
BcaB08g34600 Brassica carinata HOM05D003018 ORTHO05D003402 9.3e-07 57.8 115 37.4
A06p42880 Brassica napus HOM05D003018 ORTHO05D003402 1.2e-06 57.4 104 35.6
A06p42900 Brassica napus HOM05D003018 ORTHO05D003402 1.2e-06 57.4 105 36.2
BraA06t27200Z Brassica rapa HOM05D003018 ORTHO05D003402 1.2e-06 57.4 104 35.6
CiPaw.05G209100 Carya illinoinensis HOM05D003018 ORTHO05D003402 3.5e-06 55.8 84 39.3
ClCG01G000020 Citrullus lanatus HOM05D003018 ORTHO05D003402 3.5e-06 55.8 165 30.9
BolC7t43931H Brassica oleracea HOM05D003018 ORTHO05D003402 4.6e-06 55.5 105 35.2
BcaB08g34602 Brassica carinata HOM05D003018 ORTHO05D003402 6.0e-06 55.1 118 34.7
DCAR_014570 Daucus carota HOM05D006062 ORTHO05D007613 6.0e-06 55.1 178 29.2
BcaC06g31150 Brassica carinata HOM05D003018 ORTHO05D003402 7.9e-06 54.7 105 35.2
C07p34160 Brassica napus HOM05D003018 ORTHO05D003402 7.9e-06 54.7 105 35.2


User provided reference genes

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