Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0898 Papaver somniferum HOM05D004586 ORTHO05D005266 2.2e-78 295.8 182 100.0
PSO675G0516 Papaver somniferum HOM05D004586 ORTHO05D005266 1.2e-52 210.3 181 79.0
PSO541G0834 Papaver somniferum HOM05D004586 ORTHO05D005266 2.8e-52 209.1 182 79.1
PSO384G2677 Papaver somniferum HOM05D004586 ORTHO05D005266 3.3e-29 132.5 83 83.1
TAR627G0949 Trochodendron aralioides HOM05D004586 ORTHO05D005266 1.0e-22 110.9 91 64.8
HanXRQChr14g0441421 Helianthus annuus HOM05D004586 ORTHO05D005266 3.9e-22 109.0 83 67.5
MBI02_g10548_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 6.6e-22 108.2 82 67.1
HanXRQChr05g0140481 Helianthus annuus HOM05D004586 ORTHO05D005266 1.5e-21 107.1 83 66.3
ECA234G1777 Erigeron canadensis HOM05D004586 ORTHO05D005266 7.3e-21 104.8 84 64.3
Lsat_1_v5_gn_4_68860 Lactuca sativa HOM05D004586 ORTHO05D005266 1.6e-20 103.6 80 63.8
Hma1.2p1_0875F.1_g231553 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 3.6e-20 102.4 83 61.4
Hma1.2p1_0875F.1_g231580 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 3.6e-20 102.4 83 61.4
Actinidia09891 Actinidia chinensis HOM05D004586 ORTHO05D005266 1.4e-19 100.5 86 59.3
CSS0039758 Camellia sinensis var. sinensis HOM05D004586 ORTHO05D005266 1.8e-19 100.1 83 59.0
SalBow1G4799 Salvia bowleyana HOM05D004586 ORTHO05D005266 1.8e-19 100.1 84 61.9
SalBow7G1236 Salvia bowleyana HOM05D004586 ORTHO05D005266 1.8e-19 100.1 84 61.9
FAN02G1766 Fragaria x ananassa HOM05D004586 ORTHO05D005266 6.9e-19 98.2 98 50.0
FAN14G4866 Fragaria x ananassa HOM05D004586 ORTHO05D005266 6.9e-19 98.2 96 52.1
RcHm_v2.0_Chr2g0162091 Rosa chinensis HOM05D004586 ORTHO05D005266 6.9e-19 98.2 101 50.5
Oeu025511.1 Olea europaea HOM05D004586 ORTHO05D005266 1.5e-18 97.1 86 58.1
FvH4_6g44910 Fragaria vesca HOM05D004586 ORTHO05D005266 2.0e-18 96.7 98 50.0
FAN05G3704 Fragaria x ananassa HOM05D004586 ORTHO05D005266 2.0e-18 96.7 98 50.0
FAN09G2343 Fragaria x ananassa HOM05D004586 ORTHO05D005266 4.5e-18 95.5 98 50.0
Lj1C734T7 Lonicera japonica HOM05D004586 ORTHO05D005266 4.5e-18 95.5 84 60.7
Atru.chr6.3049 Acer truncatum HOM05D004586 ORTHO05D005266 5.8e-18 95.1 70 62.9
BraA10t42477Z Brassica rapa HOM05D000330 ORTHO05D000209 1.3e-17 94.0 94 50.0
Cfa014556 Carpinus fangiana HOM05D004586 ORTHO05D005266 1.3e-17 94.0 109 48.6
Actinidia12449 Actinidia chinensis HOM05D004586 ORTHO05D005266 2.2e-17 93.2 89 52.8
Cpa.g.sc34.112 Carica papaya HOM05D004586 ORTHO05D005266 2.9e-17 92.8 81 58.0
Nitab4.5_0007732g0010 Nicotiana tabacum HOM05D004586 ORTHO05D005266 2.9e-17 92.8 105 45.7
Nitab4.5_0009520g0030 Nicotiana tabacum HOM05D004586 ORTHO05D005266 2.9e-17 92.8 82 58.5
BcaC05g24523 Brassica carinata HOM05D004586 ORTHO05D005266 3.8e-17 92.4 98 49.0
BolC5t28977H Brassica oleracea HOM05D004586 ORTHO05D005266 3.8e-17 92.4 98 49.0
QL10p048480 Quercus lobata HOM05D004586 ORTHO05D005266 3.8e-17 92.4 66 63.6
TWI36G0730 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 3.8e-17 92.4 66 63.6
MSTRG.14187 Avicennia marina HOM05D004586 ORTHO05D005266 4.9e-17 92.0 88 56.8
COL.COLO4_13701 Corchorus olitorius HOM05D004586 ORTHO05D005266 4.9e-17 92.0 61 68.9
Aa31LG1G20890 Aethionema arabicum HOM05D004586 ORTHO05D005266 6.4e-17 91.7 99 46.5
Psat0s4261g0040 Pisum sativum HOM05D004586 ORTHO05D005266 6.4e-17 91.7 56 73.2
Haze_13103 Corylus avellana HOM05D004586 ORTHO05D005266 8.4e-17 91.3 115 45.2
Lj3g0023901 Lotus japonicus HOM05D004586 ORTHO05D005266 8.4e-17 91.3 93 49.5
Nitab4.5_0003018g0070 Nicotiana tabacum HOM05D004586 ORTHO05D005266 8.4e-17 91.3 82 57.3
PGSC0003DMG400018364 Solanum tuberosum HOM05D004586 ORTHO05D005266 8.4e-17 91.3 82 56.1
A10p02080 Brassica napus HOM05D000330 ORTHO05D005266 1.1e-16 90.9 98 49.0
C05p01990 Brassica napus HOM05D004586 ORTHO05D005266 1.1e-16 90.9 98 49.0
Thhalv10006867m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 1.1e-16 90.9 73 58.9
AT1G03530 Arabidopsis thaliana HOM05D004586 ORTHO05D005266 1.4e-16 90.5 109 45.9
Ca_20687_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 1.4e-16 90.5 64 64.1
Glyma.12G108100 Glycine max HOM05D004586 ORTHO05D005266 1.4e-16 90.5 54 75.9
Gohir.D13G149100 Gossypium hirsutum HOM05D004586 ORTHO05D005266 1.4e-16 90.5 70 61.4
MD09G1092000 Malus domestica HOM05D004586 ORTHO05D005266 1.4e-16 90.5 103 46.6
Peaxi162Scf00007g02845 Petunia axillaris HOM05D004586 ORTHO05D005266 1.4e-16 90.5 82 57.3
Sopen07g028400 Solanum pennellii HOM05D004586 ORTHO05D005266 1.4e-16 90.5 82 56.1
Gorai.013G166800 Gossypium raimondii HOM05D004586 ORTHO05D005266 1.9e-16 90.1 70 61.4
AL1G13040 Arabidopsis lyrata HOM05D004586 ORTHO05D005266 2.4e-16 89.7 105 45.7
SGA_v2.0_scaffold159G37633 Striga asiatica HOM05D004586 ORTHO05D005266 2.4e-16 89.7 84 52.4
Migut.H01030 Erythranthe guttata HOM05D004586 ORTHO05D005266 3.2e-16 89.4 87 52.9
Carub.0001s0267 Capsella rubella HOM05D004586 ORTHO05D005266 4.2e-16 89.0 110 44.5
Thecc.02G173500 Theobroma cacao HOM05D004586 ORTHO05D005266 4.2e-16 89.0 64 62.5
BcaB08g36102 Brassica carinata HOM05D004586 ORTHO05D005266 5.4e-16 88.6 98 48.0
Solyc07g054460.4 Solanum lycopersicum HOM05D004586 ORTHO05D005266 5.4e-16 88.6 82 54.9
TPR.G21660 Trifolium pratense HOM05D004586 ORTHO05D005266 5.4e-16 88.6 83 55.4
Duzib106G1111 Durio zibethinus HOM05D004586 ORTHO05D005266 7.1e-16 88.2 86 54.7
MD17G1081900 Malus domestica HOM05D004586 ORTHO05D005266 7.1e-16 88.2 67 59.7
Prupe.3G233000 Prunus persica HOM05D004586 ORTHO05D005266 7.1e-16 88.2 59 64.4
Sp1g02460 Schrenkiella parvula HOM05D004586 ORTHO05D005266 7.1e-16 88.2 104 46.2
SGA_v2.0_scaffold49G18309 Striga asiatica HOM05D004586 ORTHO05D005266 9.3e-16 87.8 83 54.2
HPP92_014062 Vanilla planifolia HOM05D004586 ORTHO05D005266 9.3e-16 87.8 102 51.0
Os05g0502800 Oryza sativa ssp. japonica HOM05D004586 ORTHO05D005266 1.2e-15 87.4 55 72.7
TAR629G0893 Trochodendron aralioides HOM05D004586 ORTHO05D005266 1.2e-15 87.4 88 54.5
Medtr0072s0050 Medicago truncatula HOM05D004586 ORTHO05D005266 1.6e-15 87.0 84 53.6
BcaB01g00913 Brassica carinata HOM05D004586 ORTHO05D005266 2.1e-15 86.7 71 59.2
CANSAT64G2104 Cannabis sativa HOM05D004586 ORTHO05D005266 2.7e-15 86.3 66 62.1
COL.COLO4_08510 Corchorus olitorius HOM05D004586 ORTHO05D005266 2.7e-15 86.3 54 74.1
Eucgr.B03848 Eucalyptus grandis HOM05D004586 ORTHO05D005266 4.6e-15 85.5 113 43.4
Gohir.A13G144300 Gossypium hirsutum HOM05D004586 ORTHO05D005266 4.6e-15 85.5 76 56.6
Lalb_Chr01g0005391 Lupinus albus HOM05D004586 ORTHO05D005266 4.6e-15 85.5 63 60.3
BcaB02g06919 Brassica carinata HOM05D004586 ORTHO05D005266 6.0e-15 85.1 71 57.7
Glyma.06G297000 Glycine max HOM05D004586 ORTHO05D005266 7.9e-15 84.7 77 54.5
Nn1g03938 Nelumbo nucifera HOM05D004586 ORTHO05D005266 7.9e-15 84.7 83 59.0
TWI18G0514 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 7.9e-15 84.7 63 61.9
CAN.G78.83 Capsicum annuum HOM05D004586 ORTHO05D005266 1.0e-14 84.3 71 60.6
Ciclev10014470m.g Citrus clementina HOM05D004586 ORTHO05D005266 1.0e-14 84.3 108 43.5
Manes.12G079600 Manihot esculenta HOM05D004586 ORTHO05D005266 1.3e-14 84.0 66 60.6
THA.LOC104826023 Tarenaya hassleriana HOM05D004586 ORTHO05D005266 1.3e-14 84.0 113 45.1
arahy.Tifrunner.gnm1.ann1.FC6AAX Arachis hypogaea HOM05D004586 ORTHO05D005266 1.8e-14 83.6 72 55.6
CiPaw.03G171000 Carya illinoinensis HOM05D004586 ORTHO05D005266 1.8e-14 83.6 60 63.3
AUR62035735 Chenopodium quinoa HOM05D004586 ORTHO05D005266 2.3e-14 83.2 71 57.7
Sc12g0002770 Simmondsia chinensis HOM05D004586 ORTHO05D005266 2.3e-14 83.2 66 62.1
EL10As5g23555 Beta vulgaris HOM05D004586 ORTHO05D005266 3.0e-14 82.8 83 53.0
Thhalv10024822m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 3.0e-14 82.8 71 53.5
ATR0693G407 Amborella trichopoda HOM05D004586 ORTHO05D005266 3.9e-14 82.4 80 56.2
ClCG02G017410 Citrullus lanatus HOM05D004586 ORTHO05D005266 3.9e-14 82.4 63 63.5
Sed0007770 Sechium edule HOM05D004586 ORTHO05D005266 3.9e-14 82.4 71 60.6
CARHR002890 Cardamine hirsuta HOM05D004586 ORTHO05D005266 5.1e-14 82.0 72 55.6
Cc00_g21120 Coffea canephora HOM05D004586 ORTHO05D005266 5.1e-14 82.0 90 51.1
A08p37340 Brassica napus HOM05D004586 ORTHO05D005266 6.7e-14 81.6 93 44.1
CsaV3_2G036510 Cucumis sativus L. HOM05D004586 ORTHO05D005266 6.7e-14 81.6 63 60.3
GSVIVG01030569001 Vitis vinifera HOM05D004586 ORTHO05D005266 6.7e-14 81.6 65 60.0
MBI02_g27225_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 1.1e-13 80.9 66 63.6
Zm00001eb292050 Zea mays HOM05D004586 ORTHO05D005266 1.1e-13 80.9 80 55.0
PGR042G3101 Punica granatum HOM05D004586 ORTHO05D005266 1.9e-13 80.1 82 51.2
Sabra13G0117000 Salix brachista HOM05D004586 ORTHO05D005266 2.5e-13 79.7 108 41.7
VMungo1127G2109 Vigna mungo HOM05D004586 ORTHO05D005266 4.3e-13 79.0 86 48.8
MELO3C021880.2 Cucumis melo HOM05D004586 ORTHO05D005266 5.6e-13 78.6 54 64.8
Duzib052G0504 Durio zibethinus HOM05D004586 ORTHO05D005266 5.6e-13 78.6 64 56.2
C08p00660 Brassica napus HOM05D004586 ORTHO05D005266 1.3e-12 77.4 96 43.8
Phvul.011G112400 Phaseolus vulgaris HOM05D004586 ORTHO05D005266 1.3e-12 77.4 54 61.1
BraA08t35631Z Brassica rapa HOM05D004586 ORTHO05D005266 2.1e-12 76.6 93 41.9
Potri.013G145300 Populus trichocarpa HOM05D004586 ORTHO05D005266 2.1e-12 76.6 114 41.2
vmacro12267 Vaccinium macrocarpon HOM05D004586 ORTHO05D005266 2.1e-12 76.6 188 43.1
Potri.019G104400 Populus trichocarpa HOM05D004586 ORTHO05D005266 3.6e-12 75.9 62 58.1
MELO3C003861.2 Cucumis melo HOM05D004586 ORTHO05D005266 4.8e-12 75.5 106 38.7
unitig_26.g9937 Utricularia gibba HOM05D004586 ORTHO05D005266 6.2e-12 75.1 89 49.4
Ca_27565_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 8.1e-12 74.7 91 44.0
BolC8t46864H Brassica oleracea HOM05D004586 ORTHO05D005266 5.3e-11 72.0 91 39.6
SEGI_15076 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 3.4e-10 69.3 107 38.3
CDE02G4059 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 5.8e-10 68.6 65 47.7
Rhsim06G0149700 Rhododendron simsii HOM05D004586 ORTHO05D005266 7.6e-10 68.2 53 54.7
CDE02G0135 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 9.9e-10 67.8 44 63.6
Lj3g0000702 Lotus japonicus HOM05D004586 ORTHO05D005266 9.9e-10 67.8 75 52.0
Dinv15471 Davidia involucrata HOM05D004586 ORTHO05D005266 1.7e-09 67.0 43 69.8
SHI10466 Sapria himalayana HOM05D004586 ORTHO05D005266 2.9e-09 66.2 107 42.1
arahy.Tifrunner.gnm1.ann1.SANC69 Arachis hypogaea HOM05D004586 ORTHO05D005266 3.8e-09 65.9 78 42.3
Ah.01g003940 Amaranthus hybridus HOM05D004586 ORTHO05D005266 1.9e-08 63.5 72 44.4
SMO137G0274 Selaginella moellendorffii HOM05D004586 ORTHO05D005266 3.2e-08 62.8 53 50.9
arahy.Tifrunner.gnm1.ann1.IS01QF Arachis hypogaea HOM05D004586 ORTHO05D005266 5.5e-08 62.0 83 42.2
CBR_g12767 Chara braunii HOM05D004586 ORTHO05D005266 1.2e-07 60.8 68 42.6
AUR62000198 Chenopodium quinoa HOM05D004586 ORTHO05D005266 1.6e-07 60.5 100 36.0
Pp3c14_14050 Physcomitrium patens HOM05D004586 ORTHO05D005266 1.6e-07 60.5 87 39.1
TPR.G27075 Trifolium pratense HOM05D004586 ORTHO05D005266 2.1e-07 60.1 94 41.5
SEGI_25704 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 6.0e-07 58.5 106 37.7
Hund09647 Selenicereus undatus HOM05D004586 ORTHO05D005266 7.9e-07 58.2 45 57.8
Medtr2g090095 Medicago truncatula HOM05D004586 ORTHO05D005266 1.3e-06 57.4 93 37.6
Peaxi162Scf00485g00032 Petunia axillaris HOM05D004586 ORTHO05D005266 2.3e-06 56.6 250 28.8


User provided reference genes

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