Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 1.5e-55 219.9 175 100.0
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 8.3e-38 161.0 157 60.5
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 6.6e-27 124.8 102 65.7
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 9.5e-26 120.9 93 69.9
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 2.8e-25 119.4 92 68.5
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 3.6e-25 119.0 93 67.7
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 4.7e-25 118.6 95 69.5
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 8.1e-25 117.9 97 66.0
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 1.4e-24 117.1 99 63.6
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 3.1e-24 115.9 109 60.6
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 4.0e-24 115.5 95 67.4
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 5.2e-24 115.2 93 66.7
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 8.9e-24 114.4 95 66.3
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 1.5e-23 113.6 100 66.0
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 1.5e-23 113.6 92 66.3
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 1.5e-23 113.6 96 65.6
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 2.0e-23 113.2 95 66.3
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 3.4e-23 112.5 100 65.0
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 3.4e-23 112.5 92 66.3
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 3.4e-23 112.5 96 65.6
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 4.4e-23 112.1 103 60.2
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 4.4e-23 112.1 99 63.6
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 4.4e-23 112.1 92 68.5
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 4.4e-23 112.1 101 61.4
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 5.8e-23 111.7 93 71.0
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 7.5e-23 111.3 92 65.2
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 7.5e-23 111.3 99 63.6
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 9.8e-23 110.9 92 63.0
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 1.3e-22 110.5 103 62.1
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 1.3e-22 110.5 100 57.0
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 1.3e-22 110.5 92 62.0
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 1.7e-22 110.2 100 65.0
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 2.2e-22 109.8 96 69.8
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 2.2e-22 109.8 92 65.2
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 2.9e-22 109.4 106 67.0
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 2.9e-22 109.4 100 63.0
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 4.9e-22 108.6 92 66.3
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 1.1e-21 107.5 100 62.0
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 1.1e-21 107.5 104 60.6
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 2.4e-21 106.3 92 67.4
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 3.2e-21 105.9 94 66.0
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 4.1e-21 105.5 98 58.2
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 4.1e-21 105.5 105 61.0
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 4.1e-21 105.5 93 71.0
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 5.4e-21 105.1 96 62.5
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 5.4e-21 105.1 93 69.9
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 5.4e-21 105.1 106 57.5
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 7.1e-21 104.8 105 56.2
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 7.1e-21 104.8 92 62.0
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 9.2e-21 104.4 108 59.3
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 1.2e-20 104.0 109 57.8
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 2.7e-20 102.8 92 69.6
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 4.6e-20 102.1 82 64.6
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 7.8e-20 101.3 109 56.9
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 7.8e-20 101.3 60 85.0
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 1.7e-19 100.1 97 58.8
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 2.3e-19 99.8 98 57.1
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 2.3e-19 99.8 60 85.0
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 2.3e-19 99.8 98 57.1
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 2.3e-19 99.8 98 57.1
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 2.3e-19 99.8 60 85.0
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 2.3e-19 99.8 60 85.0
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 2.3e-19 99.8 60 83.3
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 3.0e-19 99.4 80 63.8
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 3.0e-19 99.4 106 55.7
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 3.9e-19 99.0 91 60.4
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 3.9e-19 99.0 92 67.4
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 8.6e-19 97.8 93 62.4
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 8.6e-19 97.8 101 55.4
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 1.1e-18 97.4 91 57.1
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 1.1e-18 97.4 102 55.9
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 1.5e-18 97.1 55 81.8
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 1.5e-18 97.1 60 80.0
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 1.9e-18 96.7 92 66.3
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 2.5e-18 96.3 78 65.4
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 3.3e-18 95.9 56 82.1
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 4.3e-18 95.5 96 57.3
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 4.3e-18 95.5 98 55.1
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 7.3e-18 94.7 71 69.0
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 9.5e-18 94.4 53 81.1
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 9.5e-18 94.4 60 78.3
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 1.2e-17 94.0 60 78.3
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 1.6e-17 93.6 97 62.9
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 1.6e-17 93.6 60 78.3
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 2.8e-17 92.8 56 83.9
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 6.2e-17 91.7 60 76.7
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 1.1e-16 90.9 60 75.0
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 2.3e-16 89.7 55 76.4
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 8.9e-16 87.8 92 54.3
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 1.2e-15 87.4 101 58.4
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 2.0e-15 86.7 78 64.1
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 2.0e-15 86.7 78 62.8
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 4.4e-15 85.5 56 71.4
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 6.4e-14 81.6 58 69.0
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 1.2e-07 60.8 56 53.6


User provided reference genes

Program Settings