Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0740 Papaver somniferum HOM05D003612 ORTHO05D004323 6.7e-119 430.6 208 100.0
PSO339G0745 Papaver somniferum HOM05D003612 ORTHO05D004323 3.4e-107 391.7 193 98.4
PSO648G0079 Papaver somniferum HOM05D003612 ORTHO05D004323 5.5e-81 304.7 184 81.5
PSO210G3983 Papaver somniferum HOM05D003612 ORTHO05D004323 1.0e-63 247.3 184 66.3
PSO210G2319 Papaver somniferum HOM05D003612 ORTHO05D004323 2.2e-61 239.6 189 63.5
TAR369G0285 Trochodendron aralioides HOM05D003612 ORTHO05D004323 3.3e-49 199.1 185 55.1
PSO339G6630 Papaver somniferum HOM05D003612 ORTHO05D004323 7.3e-49 198.0 165 60.6
Lj2A386T88 Lonicera japonica HOM05D003612 ORTHO05D004323 1.4e-47 193.7 183 53.0
MBI16_g21161_MAGBIO Magnolia biondii HOM05D003612 ORTHO05D004323 1.2e-46 190.7 183 53.0
Migut.B00971 Erythranthe guttata HOM05D003612 ORTHO05D004323 5.8e-46 188.3 185 53.0
Cc04_g15140 Coffea canephora HOM05D003612 ORTHO05D004323 1.3e-45 187.2 183 51.4
Migut.K00098 Erythranthe guttata HOM05D003612 ORTHO05D004323 1.7e-45 186.8 185 52.4
Aa31LG10G12210 Aethionema arabicum HOM05D000708 ORTHO05D004323 1.9e-44 183.3 183 48.1
Ca_08432_v3 Cicer arietinum L. HOM05D003612 ORTHO05D004323 1.9e-44 183.3 195 48.2
Aqoxy7G03372 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 3.2e-44 182.6 182 50.5
Dinv02797 Davidia involucrata HOM05D003612 ORTHO05D004323 4.1e-44 182.2 180 50.6
Ciclev10005938m.g Citrus clementina HOM05D003612 ORTHO05D004323 7.0e-44 181.4 185 50.3
Gohir.A01G194000 Gossypium hirsutum HOM05D003612 ORTHO05D004323 1.2e-43 180.6 184 50.0
Gorai.002G227800 Gossypium raimondii HOM05D003612 ORTHO05D004323 1.6e-43 180.3 184 50.0
SalBow1G2865 Salvia bowleyana HOM05D003612 ORTHO05D004323 2.1e-43 179.9 185 51.4
Aqoxy7G03834 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 2.7e-43 179.5 183 50.3
Potri.017G142200 Populus trichocarpa HOM05D003612 ORTHO05D004323 4.6e-43 178.7 183 49.2
Cc06_g17860 Coffea canephora HOM05D003612 ORTHO05D004323 7.8e-43 177.9 183 50.8
Actinidia22794 Actinidia chinensis HOM05D003612 ORTHO05D004323 1.3e-42 177.2 183 48.6
arahy.Tifrunner.gnm1.ann1.GM1CB9 Arachis hypogaea HOM05D003612 ORTHO05D004323 1.7e-42 176.8 185 48.6
TPR.G6202 Trifolium pratense HOM05D003612 ORTHO05D004323 1.7e-42 176.8 187 47.1
TWI53G1732 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 2.3e-42 176.4 180 47.2
TWI74G0690 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 2.3e-42 176.4 180 47.8
Haze_19817 Corylus avellana HOM05D003612 ORTHO05D004323 3.0e-42 176.0 194 49.0
Eucgr.B02734 Eucalyptus grandis HOM05D003612 ORTHO05D004323 3.0e-42 176.0 180 48.3
Aa31LG1G13790 Aethionema arabicum HOM05D003612 ORTHO05D004323 3.9e-42 175.6 185 48.6
Lj1g0003709 Lotus japonicus HOM05D003612 ORTHO05D004323 3.9e-42 175.6 195 45.1
Sabra17G0119100 Salix brachista HOM05D003612 ORTHO05D004323 5.1e-42 175.3 183 48.6
Haze_19820 Corylus avellana HOM05D003612 ORTHO05D004323 6.6e-42 174.9 194 49.0
GSVIVG01033242001 Vitis vinifera HOM05D003612 ORTHO05D004323 6.6e-42 174.9 184 51.1
Dinv39651 Davidia involucrata HOM05D003612 ORTHO05D004323 8.6e-42 174.5 180 50.6
Cfa016791 Carpinus fangiana HOM05D003612 ORTHO05D004323 1.1e-41 174.1 180 50.6
Hund23474 Selenicereus undatus HOM05D003612 ORTHO05D004323 1.1e-41 174.1 181 50.8
BraA04t16040Z Brassica rapa HOM05D003612 ORTHO05D004323 1.5e-41 173.7 181 48.6
AL5G38900 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 2.5e-41 172.9 183 48.1
arahy.Tifrunner.gnm1.ann1.65NHSX Arachis hypogaea HOM05D003612 ORTHO05D004323 3.3e-41 172.6 185 48.1
Manes.04G104200 Manihot esculenta HOM05D003612 ORTHO05D004323 5.6e-41 171.8 184 47.8
Psat7g055720 Pisum sativum HOM05D003612 ORTHO05D004323 5.6e-41 171.8 195 45.6
vmacro09060 Vaccinium macrocarpon HOM05D003612 ORTHO05D004323 7.3e-41 171.4 183 49.2
Oeu008170.1 Olea europaea HOM05D003612 ORTHO05D004323 9.5e-41 171.0 185 46.5
PGR004G2683 Punica granatum HOM05D003612 ORTHO05D004323 9.5e-41 171.0 180 49.4
CARHR167560 Cardamine hirsuta HOM05D003612 ORTHO05D004323 1.2e-40 170.6 182 47.3
Cpa.g.sc182.7 Carica papaya HOM05D003612 ORTHO05D004323 1.2e-40 170.6 185 50.8
Oeu023123.1 Olea europaea HOM05D003612 ORTHO05D004323 1.2e-40 170.6 184 47.8
Psat3g074360 Pisum sativum HOM05D003612 ORTHO05D004323 1.2e-40 170.6 206 45.1
AT3G57360 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 1.6e-40 170.2 183 48.1
BcaC02g09930 Brassica carinata HOM05D003612 ORTHO05D004323 2.1e-40 169.9 181 48.1
C04p35070 Brassica napus HOM05D003612 ORTHO05D004323 2.1e-40 169.9 181 48.1
BolC4t25063H Brassica oleracea HOM05D003612 ORTHO05D004323 2.1e-40 169.9 181 48.1
Eucgr.A02322 Eucalyptus grandis HOM05D003612 ORTHO05D004323 2.1e-40 169.9 180 47.2
Medtr8g090105 Medicago truncatula HOM05D003612 ORTHO05D004323 2.1e-40 169.9 187 44.4
Carub.0001s3481 Capsella rubella HOM05D003612 ORTHO05D004323 2.8e-40 169.5 182 49.5
Hund15698 Selenicereus undatus HOM05D003612 ORTHO05D004323 2.8e-40 169.5 181 49.2
Carub.0005s2421 Capsella rubella HOM05D003612 ORTHO05D004323 3.6e-40 169.1 183 49.2
Actinidia17229 Actinidia chinensis HOM05D003612 ORTHO05D004323 4.7e-40 168.7 180 47.8
QL11p026785 Quercus lobata HOM05D003612 ORTHO05D004323 4.7e-40 168.7 191 46.6
TPR.G18234 Trifolium pratense HOM05D003612 ORTHO05D004323 6.2e-40 168.3 187 46.0
MELO3C025231.2 Cucumis melo HOM05D003612 ORTHO05D004323 8.1e-40 167.9 182 50.0
Lj6g0010730 Lotus japonicus HOM05D003612 ORTHO05D004323 1.4e-39 167.2 187 43.9
CSS0036075 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 1.8e-39 166.8 182 47.3
Sed0024079 Sechium edule HOM05D003612 ORTHO05D004323 1.8e-39 166.8 181 49.7
A04p03190 Brassica napus HOM05D003612 ORTHO05D004323 3.1e-39 166.0 176 47.7
ClCG04G006280 Citrullus lanatus HOM05D003612 ORTHO05D004323 4.0e-39 165.6 182 48.4
Rhsim04G0105800 Rhododendron simsii HOM05D003612 ORTHO05D004323 4.0e-39 165.6 183 45.9
AL3G11670 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 5.2e-39 165.2 183 48.6
RcHm_v2.0_Chr3g0483371 Rosa chinensis HOM05D003612 ORTHO05D004323 6.8e-39 164.9 177 48.6
MSTRG.26129 Avicennia marina HOM05D003612 ORTHO05D004323 1.2e-38 164.1 199 43.7
SGA_v2.0_scaffold94G28492 Striga asiatica HOM05D003612 ORTHO05D004323 1.2e-38 164.1 186 47.3
THA.LOC104802043 Tarenaya hassleriana HOM05D003612 ORTHO05D004323 1.5e-38 163.7 185 47.0
VMungo1309G0648 Vigna mungo HOM05D003612 ORTHO05D004323 1.5e-38 163.7 189 44.4
CiPaw.09G039700 Carya illinoinensis HOM05D003612 ORTHO05D004323 2.0e-38 163.3 180 48.3
QL07p002913 Quercus lobata HOM05D003612 ORTHO05D004323 2.0e-38 163.3 191 45.0
HPP92_020032 Vanilla planifolia HOM05D003612 ORTHO05D004323 2.6e-38 162.9 180 47.8
MD12G1080400 Malus domestica HOM05D003612 ORTHO05D004323 3.4e-38 162.5 178 49.4
VMungo1383G3573 Vigna mungo HOM05D003612 ORTHO05D004323 3.4e-38 162.5 197 42.6
CsaV3_4G027280 Cucumis sativus L. HOM05D003612 ORTHO05D004323 7.5e-38 161.4 182 48.9
Prupe.7G055000 Prunus persica HOM05D003612 ORTHO05D004323 7.5e-38 161.4 177 49.2
Phvul.008G158112 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 1.3e-37 160.6 186 44.6
CANSAT80G2682 Cannabis sativa HOM05D003612 ORTHO05D004323 3.7e-37 159.1 183 47.0
A09p50260 Brassica napus HOM05D003612 ORTHO05D004323 1.4e-36 157.1 183 44.3
BraA09t40476Z Brassica rapa HOM05D003612 ORTHO05D004323 1.4e-36 157.1 183 44.3
Nn8g39441 Nelumbo nucifera HOM05D003612 ORTHO05D004323 2.4e-36 156.4 184 44.6
Nitab4.5_0004416g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 2.4e-36 156.4 189 46.6
Zm00001eb102310 Zea mays HOM05D003612 ORTHO05D004323 2.4e-36 156.4 181 45.9
Sp5g05240 Schrenkiella parvula HOM05D003612 ORTHO05D004323 3.2e-36 156.0 183 44.8
C08p32750 Brassica napus HOM05D003612 ORTHO05D004323 4.1e-36 155.6 183 43.7
BolC8t50886H Brassica oleracea HOM05D003612 ORTHO05D004323 4.1e-36 155.6 183 43.7
Lalb_Chr20g0110641 Lupinus albus HOM05D003612 ORTHO05D004323 7.1e-36 154.8 188 43.1
DCAR_030722 Daucus carota HOM05D003612 ORTHO05D004323 9.2e-36 154.5 177 46.3
HanXRQChr04g0113101 Helianthus annuus HOM05D003612 ORTHO05D004323 9.2e-36 154.5 187 44.9
AUR62029731 Chenopodium quinoa HOM05D003612 ORTHO05D004323 1.2e-35 154.1 201 41.3
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.2e-35 154.1 177 45.2
Sopen10g029960 Solanum pennellii HOM05D003612 ORTHO05D004323 1.2e-35 154.1 189 43.4
ClCG10G015700 Citrullus lanatus HOM05D003612 ORTHO05D004323 1.6e-35 153.7 191 46.1
ECA236G0894 Erigeron canadensis HOM05D003612 ORTHO05D004323 1.6e-35 153.7 185 43.2
Peaxi162Scf00059g01812 Petunia axillaris HOM05D003612 ORTHO05D004323 1.6e-35 153.7 189 41.8
Solyc10g079310.2 Solanum lycopersicum HOM05D003612 ORTHO05D004323 1.6e-35 153.7 189 43.9
unitig_52.g17667 Utricularia gibba HOM05D003612 ORTHO05D004323 1.6e-35 153.7 182 48.4
AT3G02370 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 2.1e-35 153.3 163 48.5
Lsat_1_v5_gn_7_11501 Lactuca sativa HOM05D000048 ORTHO05D000436 2.1e-35 153.3 174 43.1
AUR62005836 Chenopodium quinoa HOM05D000760 ORTHO05D004323 2.7e-35 152.9 207 41.5
Thecc.05G151100 Theobroma cacao HOM05D003612 ORTHO05D004323 3.5e-35 152.5 167 49.1
SHI13547 Sapria himalayana HOM05D003612 ORTHO05D004323 4.6e-35 152.1 200 41.0
BcaB02g08320 Brassica carinata HOM05D003612 ORTHO05D004323 6.0e-35 151.8 172 43.6
Thhalv10006455m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 7.8e-35 151.4 181 43.6
FvH4_6g24380 Fragaria vesca HOM05D003612 ORTHO05D004323 7.8e-35 151.4 177 44.6
Glyma.07G129400 Glycine max HOM05D003612 ORTHO05D004323 7.8e-35 151.4 249 36.5
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.0e-34 151.0 177 44.1
Nitab4.5_0000082g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.0e-34 151.0 183 42.6
Nitab4.5_0000912g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.0e-34 151.0 189 45.0
CAN.G641.26 Capsicum annuum HOM05D003612 ORTHO05D004323 1.7e-34 150.2 189 44.4
AUR62032829 Chenopodium quinoa HOM05D003612 ORTHO05D004323 1.7e-34 150.2 204 41.2
ATR0829G008 Amborella trichopoda HOM05D003612 ORTHO05D004323 2.3e-34 149.8 233 39.5
PSO339G4790 Papaver somniferum HOM05D003612 ORTHO05D004323 2.3e-34 149.8 111 64.0
FAN02G1760 Fragaria x ananassa HOM05D003612 ORTHO05D004323 3.0e-34 149.4 177 44.1
PGSC0003DMG400008168 Solanum tuberosum HOM05D003612 ORTHO05D004323 3.0e-34 149.4 189 41.8
Nitab4.5_0000082g0220 Nicotiana tabacum HOM05D003612 ORTHO05D004323 3.9e-34 149.1 186 44.6
Thhalv10008553m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 8.6e-34 147.9 164 47.6
COL.COLO4_19254 Corchorus olitorius HOM05D003612 ORTHO05D004323 1.1e-33 147.5 184 45.7
Os09g0504800 Oryza sativa ssp. japonica HOM05D003612 ORTHO05D004323 1.5e-33 147.1 181 41.4
Nn1g01643 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.9e-33 146.7 184 41.8
Sopen03g026320 Solanum pennellii HOM05D003612 ORTHO05D004323 4.3e-33 145.6 169 44.4
Thhalv10009639m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 5.6e-33 145.2 182 44.0
Nitab4.5_0010316g0020 Nicotiana tabacum HOM05D003612 ORTHO05D004323 9.5e-33 144.4 183 42.1
Lj1C1128T4 Lonicera japonica HOM05D003612 ORTHO05D004323 1.2e-32 144.1 162 45.7
EL10Ac6g13255 Beta vulgaris HOM05D003612 ORTHO05D004323 1.6e-32 143.7 205 35.6
CDE09G0671 Ceratophyllum demersum HOM05D003612 ORTHO05D004323 1.6e-32 143.7 181 44.2
Phvul.007G088100 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 1.6e-32 143.7 171 44.4
COL.COLO4_22302 Corchorus olitorius HOM05D003612 ORTHO05D004323 2.8e-32 142.9 184 44.0
Ah.03g134750 Amaranthus hybridus HOM05D003612 ORTHO05D004323 3.6e-32 142.5 205 41.5
Thhalv10009908m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 2.4e-31 139.8 195 40.5
BcaC07g40390 Brassica carinata HOM05D003612 ORTHO05D004323 8.9e-31 137.9 164 45.7
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 7.6e-30 134.8 173 43.9
TAR369G0664 Trochodendron aralioides HOM05D003612 ORTHO05D004323 7.6e-30 134.8 134 50.0
CSS0050265 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 2.2e-29 133.3 152 44.1
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 6.4e-29 131.7 173 43.4
BolC8t50888H Brassica oleracea HOM05D003612 ORTHO05D004323 4.2e-28 129.0 182 40.7
Dinv02795 Davidia involucrata HOM05D003612 ORTHO05D004323 9.2e-28 127.9 138 47.8
Sc04g0007910 Simmondsia chinensis HOM05D003612 ORTHO05D004323 2.3e-26 123.2 132 50.0
Pp3c3_37380 Physcomitrium patens HOM05D003612 ORTHO05D004323 6.6e-26 121.7 194 37.1
GSVIVG01033245001 Vitis vinifera HOM05D003612 ORTHO05D004323 6.6e-26 121.7 113 52.2
Ah.02g117470 Amaranthus hybridus HOM05D003612 ORTHO05D004323 4.3e-25 119.0 205 35.6
SGA_v2.0_scaffold1G00588 Striga asiatica HOM05D003612 ORTHO05D004323 5.6e-25 118.6 183 38.8
Duzib128G0868 Durio zibethinus HOM05D003612 ORTHO05D004323 8.1e-24 114.8 136 43.4
Prupe.5G048800 Prunus persica HOM05D003612 ORTHO05D004323 1.4e-23 114.0 166 39.8
SMO364G0364 Selaginella moellendorffii HOM05D003612 ORTHO05D004323 1.4e-23 114.0 171 36.3
Gohir.D01G184300 Gossypium hirsutum HOM05D003612 ORTHO05D004323 4.0e-23 112.5 135 42.2
Sopen03g026330 Solanum pennellii HOM05D003612 ORTHO05D004323 9.9e-22 107.8 176 35.8
Nn2g10440 Nelumbo nucifera HOM05D003612 ORTHO05D004323 4.9e-21 105.5 90 54.4
PGSC0003DMG400011936 Solanum tuberosum HOM05D003612 ORTHO05D004323 8.4e-21 104.8 152 37.5
MELO3C030712.2 Cucumis melo HOM05D003612 ORTHO05D004323 1.2e-19 100.9 104 50.0
Mapoly0007s0121 Marchantia polymorpha HOM05D003612 ORTHO05D004323 2.7e-19 99.8 270 27.8
AagrBONN_evm.TU.Sc2ySwM_368.1563 Anthoceros agrestis HOM05D003612 ORTHO05D004323 6.0e-19 98.6 139 36.7
Peaxi162Scf00244g00019 Petunia axillaris HOM05D003612 ORTHO05D004323 6.0e-19 98.6 138 39.1
CSS0020602 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 6.6e-18 95.1 131 40.5
RcHm_v2.0_Chr1g0361791 Rosa chinensis HOM05D003612 ORTHO05D004323 4.3e-17 92.4 90 46.7
BcaNung07094 Brassica carinata HOM05D003612 ORTHO05D004323 5.6e-17 92.0 118 40.7
Nitab4.5_0001598g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 9.0e-15 84.7 123 42.3
CBR_g2822 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-14 84.0 100 42.0
Eucgr.A02319 Eucalyptus grandis HOM05D003612 ORTHO05D004323 2.4e-12 76.6 68 52.9
SEGI_02185 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 2.4e-12 76.6 64 54.7
Duzib093G1009 Durio zibethinus HOM05D003612 ORTHO05D004323 3.2e-12 76.3 74 45.9
MD14G1076600 Malus domestica HOM05D003612 ORTHO05D004323 2.7e-11 73.2 178 32.6
QL07p002858 Quercus lobata HOM05D003612 ORTHO05D004323 1.0e-10 71.2 130 35.4
Glyma.03G134401 Glycine max HOM05D003612 ORTHO05D004323 1.8e-10 70.5 62 50.0
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 5.1e-10 68.9 65 52.3
BcaNung07092 Brassica carinata HOM05D003612 ORTHO05D004323 1.4e-07 60.8 179 27.4
Glyma.19G136600 Glycine max HOM05D003612 ORTHO05D004323 6.9e-07 58.5 50 52.0
Cfa015703 Carpinus fangiana HOM05D003612 ORTHO05D004323 1.2e-06 57.8 52 51.9
Lj1A1127T48 Lonicera japonica HOM05D003612 ORTHO05D004323 1.2e-06 57.8 57 49.1
C08p32770 Brassica napus HOM05D003612 ORTHO05D004323 3.4e-06 56.2 55 45.5


User provided reference genes

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