Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO266G0076 Papaver somniferum HOM05D003578 ORTHO05D004021 0.0e+00 1119.4 602 100.0
PSO478G5278 Papaver somniferum HOM05D003578 ORTHO05D004021 2.1e-311 1071.6 602 95.5
PSO478G2549 Papaver somniferum HOM05D003578 ORTHO05D004021 8.7e-204 714.1 555 67.7
PSO017G3053 Papaver somniferum HOM05D003578 ORTHO05D004021 2.3e-196 689.5 530 68.1
CSS0023378 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 9.5e-150 534.6 533 54.2
Prupe.1G564000 Prunus persica HOM05D003578 ORTHO05D004021 2.0e-147 526.9 552 52.9
Actinidia39059 Actinidia chinensis HOM05D003578 ORTHO05D004021 2.7e-144 516.5 560 50.9
Dinv19347 Davidia involucrata HOM05D003578 ORTHO05D004021 6.0e-144 515.4 557 52.2
CSS0005813 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 2.3e-143 513.5 559 52.8
Rhsim11G0132000 Rhododendron simsii HOM05D003578 ORTHO05D004021 1.5e-142 510.8 572 50.3
Cfa005568 Carpinus fangiana HOM05D003578 ORTHO05D004021 1.9e-142 510.4 551 51.0
Aqoxy7G03367 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 4.3e-142 509.2 592 48.5
CiPaw.06G150300 Carya illinoinensis HOM05D003578 ORTHO05D004021 7.3e-142 508.4 554 51.4
MBI06_g22317_MAGBIO Magnolia biondii HOM05D003578 ORTHO05D004021 1.4e-140 504.2 561 51.7
Eucgr.G00633 Eucalyptus grandis HOM05D003578 ORTHO05D004021 1.4e-137 494.2 552 50.4
Sc20g0004020 Simmondsia chinensis HOM05D003578 ORTHO05D004021 1.4e-137 494.2 558 50.7
MD15G1419200 Malus domestica HOM05D003578 ORTHO05D004021 5.4e-137 492.3 592 47.6
Haze_10786 Corylus avellana HOM05D003578 ORTHO05D004021 2.1e-136 490.3 587 47.9
Duzib132G0407 Durio zibethinus HOM05D003578 ORTHO05D004021 1.7e-135 487.3 558 48.9
Lj6g0021493 Lotus japonicus HOM05D003578 ORTHO05D004021 5.1e-135 485.7 554 50.4
Lj1g0024840 Lotus japonicus HOM05D003578 ORTHO05D004021 9.5e-134 481.5 556 49.5
Atru.chr6.1000 Acer truncatum HOM05D003578 ORTHO05D004021 1.5e-131 474.2 553 49.5
Medtr2g028550 Medicago truncatula HOM05D003578 ORTHO05D004021 4.4e-131 472.6 555 48.8
Ca_00092_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 7.6e-131 471.9 558 49.1
Ca_29931_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 7.6e-131 471.9 558 49.1
GSVIVG01023023001 Vitis vinifera HOM05D003578 ORTHO05D004021 7.6e-131 471.9 566 49.1
Cc02_g22230 Coffea canephora HOM05D003578 ORTHO05D004021 3.8e-130 469.5 551 49.4
TWI23G0776 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 1.1e-129 468.0 550 47.6
Glyma.15G048000 Glycine max HOM05D003578 ORTHO05D004021 3.2e-129 466.5 546 49.3
Ciclev10007743m.g Citrus clementina HOM05D003578 ORTHO05D004021 4.1e-129 466.1 553 48.8
Gohir.A03G210700 Gossypium hirsutum HOM05D003578 ORTHO05D004021 3.5e-128 463.0 560 47.7
Aqoxy2G04052 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 3.0e-127 459.9 592 45.4
CANSAT11G1197 Cannabis sativa HOM05D003578 ORTHO05D004021 5.6e-126 455.7 551 47.5
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea HOM05D003578 ORTHO05D004021 1.2e-125 454.5 557 46.3
TPR.G17513 Trifolium pratense HOM05D003578 ORTHO05D004021 1.2e-125 454.5 560 47.3
PGR042G1741 Punica granatum HOM05D003578 ORTHO05D004021 2.8e-125 453.4 549 47.5
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea HOM05D003578 ORTHO05D004021 3.6e-125 453.0 557 46.0
Potri.001G208700 Populus trichocarpa HOM05D003578 ORTHO05D004021 4.7e-125 452.6 561 46.9
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 6.2e-125 452.2 556 48.9
Nitab4.5_0003071g0040 Nicotiana tabacum HOM05D003578 ORTHO05D004021 1.1e-124 451.4 553 46.1
Oeu000197.1 Olea europaea HOM05D003578 ORTHO05D004021 3.1e-124 449.9 560 46.8
Gohir.A01G176500 Gossypium hirsutum HOM05D003578 ORTHO05D004021 5.2e-124 449.1 553 46.5
QL11p018835 Quercus lobata HOM05D003578 ORTHO05D004021 5.2e-124 449.1 550 48.7
THA.LOC104824162 Tarenaya hassleriana HOM05D003578 ORTHO05D004021 1.5e-123 447.6 555 45.9
Sed0026866 Sechium edule HOM05D003578 ORTHO05D004021 2.0e-123 447.2 556 46.4
Gorai.002G207800 Gossypium raimondii HOM05D003578 ORTHO05D004021 7.6e-123 445.3 551 46.1
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea HOM05D003578 ORTHO05D004021 1.3e-122 444.5 557 45.4
Carub.0005s2123 Capsella rubella HOM05D003578 ORTHO05D004021 2.9e-122 443.4 549 46.1
Nn1g08568 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.9e-122 443.4 434 57.1
TWI14G0091 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 2.9e-122 443.4 550 46.7
MSTRG.16537 Avicennia marina HOM05D003578 ORTHO05D004021 4.9e-122 442.6 550 46.0
Hund15694 Selenicereus undatus HOM05D003578 ORTHO05D004021 6.4e-122 442.2 572 44.8
Aa31LG8G7140 Aethionema arabicum HOM05D003578 ORTHO05D004021 8.4e-122 441.8 550 45.5
CARHR164540 Cardamine hirsuta HOM05D003578 ORTHO05D004021 1.6e-120 437.6 547 45.5
Nitab4.5_0009907g0020 Nicotiana tabacum HOM05D003578 ORTHO05D004021 2.1e-120 437.2 553 45.4
SGA_v2.0_scaffold1G00330 Striga asiatica HOM05D003578 ORTHO05D004021 6.0e-120 435.6 545 45.1
AUR62033619 Chenopodium quinoa HOM05D003578 ORTHO05D004021 1.0e-119 434.9 572 45.1
Thecc.02G041600 Theobroma cacao HOM05D003578 ORTHO05D004021 1.0e-119 434.9 560 46.2
vmacro01788 Vaccinium macrocarpon HOM05D003578 ORTHO05D004021 2.3e-119 433.7 554 47.5
AUR62038607 Chenopodium quinoa HOM05D003578 ORTHO05D004021 3.9e-119 433.0 570 44.4
Phvul.006G211900 Phaseolus vulgaris HOM05D003578 ORTHO05D004021 6.6e-119 432.2 547 45.3
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 8.7e-119 431.8 540 47.4
ClCG05G009820 Citrullus lanatus HOM05D003578 ORTHO05D004021 4.3e-118 429.5 565 45.5
CsaV3_3G018800 Cucumis sativus L. HOM05D003578 ORTHO05D004021 5.6e-118 429.1 553 45.0
arahy.Tifrunner.gnm1.ann1.CJK4SJ Arachis hypogaea HOM05D003578 ORTHO05D004021 7.3e-118 428.7 568 44.2
FAN13G2947 Fragaria x ananassa HOM05D003578 ORTHO05D004021 7.3e-118 428.7 552 43.8
FvH4_5g35831 Fragaria vesca HOM05D003578 ORTHO05D004021 1.8e-116 424.1 552 43.3
FAN18G4487 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.8e-116 424.1 552 43.3
Sabra01G0161000 Salix brachista HOM05D003578 ORTHO05D004021 1.8e-116 424.1 624 43.1
MELO3C006920.2 Cucumis melo HOM05D003578 ORTHO05D004021 3.1e-116 423.3 552 44.4
FAN08G2591 Fragaria x ananassa HOM05D003578 ORTHO05D004021 4.0e-116 422.9 552 43.5
AL5G35710 Arabidopsis lyrata HOM05D003578 ORTHO05D004021 5.3e-116 422.5 549 44.4
Lsat_1_v5_gn_9_116440 Lactuca sativa HOM05D003578 ORTHO05D004021 9.0e-116 421.8 555 44.0
Gorai.005G260100 Gossypium raimondii HOM05D003578 ORTHO05D004021 1.2e-115 421.4 560 44.6
Gohir.D02G232300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 1.3e-114 417.9 560 44.6
SGA_v2.0_scaffold110G31277 Striga asiatica HOM05D003578 ORTHO05D004021 4.9e-114 416.0 560 44.5
DCAR_029239 Daucus carota HOM05D003578 ORTHO05D004021 6.4e-114 415.6 552 44.2
Cpa.g.sc2.28 Carica papaya HOM05D003578 ORTHO05D004021 1.9e-113 414.1 557 45.4
ECA238G3381 Erigeron canadensis HOM05D003578 ORTHO05D004021 4.2e-113 412.9 562 44.0
Thhalv10010243m.g Eutrema salsugineum HOM05D003578 ORTHO05D004021 1.2e-112 411.4 550 44.4
Aa31LG2G6060 Aethionema arabicum HOM05D003578 ORTHO05D004021 6.0e-112 409.1 552 42.6
CDE10G0634 Ceratophyllum demersum HOM05D003578 ORTHO05D004021 7.9e-112 408.7 545 45.5
Peaxi162Scf00011g01125 Petunia axillaris HOM05D003578 ORTHO05D004021 3.9e-111 406.4 548 43.8
SHI16565 Sapria himalayana HOM05D003578 ORTHO05D004021 1.1e-110 404.8 560 42.3
RcHm_v2.0_Chr5g0046031 Rosa chinensis HOM05D003578 ORTHO05D004021 8.1e-109 398.7 558 41.8
CSS0048877 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 1.8e-108 397.5 567 43.7
CAN.G1352.14 Capsicum annuum HOM05D003578 ORTHO05D004021 2.4e-108 397.1 511 44.4
FAN04G0507 Fragaria x ananassa HOM05D003578 ORTHO05D004021 3.1e-108 396.7 554 42.6
Migut.B00662 Erythranthe guttata HOM05D003578 ORTHO05D004021 2.6e-107 393.7 549 43.5
AT3G54630 Arabidopsis thaliana HOM05D003578 ORTHO05D004021 9.9e-107 391.7 553 42.9
Solyc01g104570.4 Solanum lycopersicum HOM05D003578 ORTHO05D004021 2.9e-106 390.2 554 42.4
Sopen01g047080 Solanum pennellii HOM05D003578 ORTHO05D004021 8.4e-106 388.7 554 42.2
BcaB02g07728 Brassica carinata HOM05D003578 ORTHO05D004021 2.4e-105 387.1 553 40.5
Lalb_Chr20g0123381 Lupinus albus HOM05D003578 ORTHO05D004021 2.4e-105 387.1 551 42.5
MD08G1226900 Malus domestica HOM05D003578 ORTHO05D004021 4.2e-105 386.3 434 49.1
PGSC0003DMG400029761 Solanum tuberosum HOM05D003578 ORTHO05D004021 2.1e-104 384.0 554 41.7
BolC8t50589H Brassica oleracea HOM05D003578 ORTHO05D004021 6.0e-104 382.5 554 41.2
C08p29780 Brassica napus HOM05D003578 ORTHO05D004021 1.3e-103 381.3 554 41.2
BcaC08g44691 Brassica carinata HOM05D003578 ORTHO05D004021 8.7e-103 378.6 547 41.5
Nn1g08571 Nelumbo nucifera HOM05D003578 ORTHO05D004021 8.7e-103 378.6 363 59.8
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea HOM05D003578 ORTHO05D004021 1.1e-102 378.3 570 40.9
BolC6t37412H Brassica oleracea HOM05D003578 ORTHO05D004021 3.3e-102 376.7 550 41.1
BcaB01g00173 Brassica carinata HOM05D003578 ORTHO05D004021 7.4e-102 375.6 550 40.5
BcaC07g39801 Brassica carinata HOM05D003578 ORTHO05D004021 9.6e-102 375.2 554 40.6
Sp5g07820 Schrenkiella parvula HOM05D003578 ORTHO05D004021 3.7e-101 373.2 558 41.0
HanXRQChr03g0066191 Helianthus annuus HOM05D003578 ORTHO05D004021 8.1e-101 372.1 548 40.9
EL10Ac2g02673 Beta vulgaris HOM05D003578 ORTHO05D004021 1.8e-100 370.9 552 41.1
A09p47580 Brassica napus HOM05D003578 ORTHO05D004021 6.9e-100 369.0 554 40.3
BraA09t40214Z Brassica rapa HOM05D003578 ORTHO05D004021 1.5e-99 367.9 554 40.3
Gohir.D01G167300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 3.8e-98 363.2 389 52.2
unitig_8.g4524 Utricularia gibba HOM05D003578 ORTHO05D004021 1.1e-97 361.7 550 40.5
Ah.10g033260 Amaranthus hybridus HOM05D003578 ORTHO05D004021 2.5e-97 360.5 554 41.9
COL.COLO4_33122 Corchorus olitorius HOM05D003578 ORTHO05D004021 3.5e-96 356.7 553 42.0
Lsat_1_v5_gn_9_118160 Lactuca sativa HOM05D003578 ORTHO05D004021 7.4e-94 349.0 553 38.9
Psat1g170680 Pisum sativum HOM05D003578 ORTHO05D004021 4.8e-93 346.3 453 44.6
Lj1C1063G12 Lonicera japonica HOM05D003578 ORTHO05D004021 8.2e-93 345.5 365 51.8
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea HOM05D003578 ORTHO05D004021 2.9e-90 337.0 439 42.8
Manes.07G012900 Manihot esculenta HOM05D003578 ORTHO05D004021 6.5e-90 335.9 444 46.8
Psat1g170240 Pisum sativum HOM05D003578 ORTHO05D004021 7.2e-89 332.4 458 43.9
HanXRQChr03g0066541 Helianthus annuus HOM05D003578 ORTHO05D004021 3.6e-88 330.1 552 39.1
Eucgr.G00629 Eucalyptus grandis HOM05D003578 ORTHO05D004021 7.9e-88 328.9 438 45.2
C06p22270 Brassica napus HOM05D003578 ORTHO05D004021 3.9e-87 326.6 547 38.6
Oeu026056.1 Olea europaea HOM05D003578 ORTHO05D004021 6.3e-85 319.3 441 45.6
TAR374G1024 Trochodendron aralioides HOM05D003578 ORTHO05D004021 1.4e-84 318.2 265 65.7
HPP92_025499 Vanilla planifolia HOM05D003578 ORTHO05D004021 8.2e-77 292.4 547 34.4
Os08g0468400 Oryza sativa ssp. japonica HOM05D003578 ORTHO05D004021 1.4e-76 291.6 561 34.8
CiPaw.05G040700 Carya illinoinensis HOM05D003578 ORTHO05D004021 2.3e-71 274.2 262 56.5
Aqoxy2G02351 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 9.7e-70 268.9 327 49.2
SEGI_09452 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 9.7e-70 268.9 442 37.8
ATR0193G049 Amborella trichopoda HOM05D003578 ORTHO05D004021 2.8e-69 267.3 419 40.3
CsaV3_3G021940 Cucumis sativus L. HOM05D003578 ORTHO05D004021 1.8e-60 238.0 250 52.0
SEGI_11795 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 1.6e-51 208.4 364 37.1
Zm00001eb040130 Zea mays HOM05D003578 ORTHO05D004021 1.0e-50 205.7 374 35.8
Mapoly0042s0088 Marchantia polymorpha HOM05D003578 ORTHO05D004021 1.8e-47 194.9 435 30.8
HPP92_025538 Vanilla planifolia HOM05D003578 ORTHO05D004021 1.1e-44 185.7 248 41.9
Pp3c7_8870 Physcomitrium patens HOM05D003578 ORTHO05D004021 3.6e-40 170.6 536 27.1
SMO254G0006 Selaginella moellendorffii HOM05D003578 ORTHO05D004021 4.7e-40 170.2 542 27.1
CiPaw.05G040600 Carya illinoinensis HOM05D003578 ORTHO05D004021 1.4e-39 168.7 224 43.8
GSVIVG01023034001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.4e-36 158.7 157 56.1
GSVIVG01023046001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.4e-36 158.7 157 56.7
PRCOL_00003819 Prasinoderma coloniale HOM05D003578 ORTHO05D004021 2.5e-33 147.9 528 25.9
Nn7g38101 Nelumbo nucifera HOM05D003578 ORTHO05D004021 7.3e-33 146.4 164 50.6
Aqoxy2G02352 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.2e-32 145.6 150 46.0
GSVIVG01023069001 Vitis vinifera HOM05D003578 ORTHO05D004021 3.6e-32 144.1 231 37.2
Nn1g00799 Nelumbo nucifera HOM05D003578 ORTHO05D004021 4.7e-32 143.7 190 45.8
A07p22210 Brassica napus HOM05D003578 ORTHO05D004021 6.2e-32 143.3 161 46.6
Cre02.g098300 Chlamydomonas reinhardtii HOM05D003578 ORTHO05D004021 1.4e-31 142.1 554 24.2
Lj1A1063T36 Lonicera japonica HOM05D003578 ORTHO05D004021 9.2e-28 129.4 158 45.6
arahy.Tifrunner.gnm1.ann1.0Y2WZB Arachis hypogaea HOM05D003578 ORTHO05D004021 2.7e-27 127.9 139 53.2
Nn1g08562 Nelumbo nucifera HOM05D003578 ORTHO05D004021 5.0e-26 123.6 116 56.9
Nn1g00803 Nelumbo nucifera HOM05D003578 ORTHO05D004021 6.6e-26 123.2 135 48.1
ATR0686G046 Amborella trichopoda HOM05D003578 ORTHO05D004021 4.7e-24 117.1 146 45.2
Lsat_1_v5_gn_4_72880 Lactuca sativa HOM05D003578 ORTHO05D004021 1.8e-23 115.2 157 37.6
CBR_g55876 Chara braunii HOM05D003578 ORTHO05D004021 2.6e-22 111.3 550 22.4
CAN.G1352.18 Capsicum annuum HOM05D003578 ORTHO05D004021 5.8e-22 110.2 162 42.6
GSVIVG01023076001 Vitis vinifera HOM05D003578 ORTHO05D004021 3.7e-21 107.5 109 55.0
HPP92_026283 Vanilla planifolia HOM05D003578 ORTHO05D004021 2.4e-20 104.8 163 41.1
PGSC0003DMG400023774 Solanum tuberosum HOM05D003578 ORTHO05D004021 2.7e-19 101.3 123 46.3
Actinidia00223 Actinidia chinensis HOM05D003578 ORTHO05D004021 4.6e-19 100.5 526 23.0
COL.COLO4_34280 Corchorus olitorius HOM05D003578 ORTHO05D004021 4.6e-19 100.5 85 61.2
Lsat_1_v5_gn_4_97940 Lactuca sativa HOM05D003523 ORTHO05D004021 2.3e-18 98.2 76 63.2
MCO01G050 Micromonas commoda HOM05D003578 ORTHO05D004021 4.3e-17 94.0 232 28.9
Solyc01g104520.3 Solanum lycopersicum HOM05D003578 ORTHO05D004021 3.6e-16 90.9 121 45.5
CsaV3_6G032180 Cucumis sativus L. HOM05D003578 ORTHO05D004021 3.1e-15 87.8 105 49.5
Pp3c11_11580 Physcomitrium patens HOM05D003578 ORTHO05D004021 1.5e-14 85.5 451 22.4
ATR0193G025 Amborella trichopoda HOM05D003578 ORTHO05D004021 2.0e-14 85.1 104 43.3
GSVIVG01038756001 Vitis vinifera HOM05D003578 ORTHO05D004021 4.4e-14 84.0 90 48.9
arahy.Tifrunner.gnm1.ann1.3K20HM Arachis hypogaea HOM05D003578 ORTHO05D004021 7.6e-14 83.2 177 29.4
Zm00001eb317570 Zea mays HOM05D003578 ORTHO05D004021 9.9e-14 82.8 134 38.8
Lsat_1_v5_gn_3_132221 Lactuca sativa HOM05D003523 ORTHO05D004493 1.3e-13 82.4 73 60.3
GSVIVG01023027001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.3e-13 82.4 75 62.7
Zm00001eb226250 Zea mays HOM05D003578 ORTHO05D004021 1.7e-13 82.0 123 39.0
Atru.chr6.1018 Acer truncatum HOM05D003578 ORTHO05D004021 1.1e-12 79.3 125 41.6
ATR0686G029 Amborella trichopoda HOM05D003578 ORTHO05D004021 2.4e-12 78.2 104 40.4
Nn7g38100 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.6e-11 75.5 111 45.9
Aqoxy2G04053 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.5e-09 68.9 65 55.4
Aqoxy7G03366 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.5e-09 68.9 65 55.4
Zm00001eb322170 Zea mays HOM05D003578 ORTHO05D004021 2.8e-08 64.7 82 37.8
FAN11G2867 Fragaria x ananassa HOM05D001988 ORTHO05D006298 4.4e-06 57.4 53 56.6
GSVIVG01023070001 Vitis vinifera HOM05D003578 ORTHO05D004021 4.4e-06 57.4 55 49.1
Sopen01g047030 Solanum pennellii HOM05D003578 ORTHO05D004021 9.9e-06 56.2 90 38.9
Zm00001eb135950 Zea mays HOM05D003578 ORTHO05D004021 9.9e-06 56.2 64 42.2


User provided reference genes

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