Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5901 Papaver somniferum HOM05D004885 ORTHO05D006124 8.9e-78 293.5 145 100.0
PSO724G1376 Papaver somniferum HOM05D004885 ORTHO05D006124 6.6e-49 197.6 203 57.1
PSO386G0181 Papaver somniferum HOM05D004885 ORTHO05D006124 1.1e-40 170.2 203 52.7
TAR629G2658 Trochodendron aralioides HOM05D004885 ORTHO05D006124 3.7e-15 85.5 197 32.0
GSVIVG01026648001 Vitis vinifera HOM05D004885 ORTHO05D006124 1.0e-12 77.4 202 28.7
Dinv08168 Davidia involucrata HOM05D004885 ORTHO05D006124 2.2e-12 76.3 196 29.6
Aqoxy3G00208 Aquilegia oxysepala HOM05D004885 ORTHO05D006124 5.0e-12 75.1 201 29.4
Rhsim08G0027300 Rhododendron simsii HOM05D004885 ORTHO05D006124 6.5e-12 74.7 182 31.3
Nn4g22671 Nelumbo nucifera HOM05D004885 ORTHO05D006124 1.9e-11 73.2 200 30.0
MBI15_g00077_MAGBIO Magnolia biondii HOM05D004885 ORTHO05D006124 5.5e-11 71.6 203 31.5
CSS0014238 Camellia sinensis var. sinensis HOM05D004885 ORTHO05D006124 7.2e-11 71.2 203 28.1
Atru.chr3.136 Acer truncatum HOM05D004885 ORTHO05D006124 3.6e-10 68.9 211 28.0
Atru.chr4.1890 Acer truncatum HOM05D004885 ORTHO05D006124 3.6e-10 68.9 208 27.9
CSS0037388 Camellia sinensis var. sinensis HOM05D004885 ORTHO05D006124 3.6e-10 68.9 202 28.2
Dinv40183 Davidia involucrata HOM05D004885 ORTHO05D006124 6.1e-10 68.2 158 31.6
Actinidia22902 Actinidia chinensis HOM05D004885 ORTHO05D006124 3.0e-09 65.9 190 27.4
RcHm_v2.0_Chr2g0097311 Rosa chinensis HOM05D004885 ORTHO05D006124 3.0e-09 65.9 173 30.1
Sabra05G0033700 Salix brachista HOM05D004885 ORTHO05D006124 3.0e-09 65.9 155 32.9
Potri.005G028900 Populus trichocarpa HOM05D004885 ORTHO05D006124 3.9e-09 65.5 154 34.4
vmacro18463 Vaccinium macrocarpon HOM05D004885 ORTHO05D006124 5.1e-09 65.1 162 30.9
MD02G1117700 Malus domestica HOM05D004885 ORTHO05D006124 6.7e-09 64.7 157 32.5
Glyma.01G159000 Glycine max HOM05D004885 ORTHO05D006124 8.8e-09 64.3 199 29.6
MD15G1232400 Malus domestica HOM05D004885 ORTHO05D006124 8.8e-09 64.3 158 30.4
Cpa.g.sc365.1 Carica papaya HOM05D004885 ORTHO05D006124 1.5e-08 63.5 203 28.1
CDE06G1258 Ceratophyllum demersum HOM05D004885 ORTHO05D006124 1.5e-08 63.5 197 26.9
Thecc.01G005900 Theobroma cacao HOM05D004885 ORTHO05D006124 1.5e-08 63.5 156 30.8
arahy.Tifrunner.gnm1.ann1.E2QT4D Arachis hypogaea HOM05D004885 ORTHO05D006124 2.5e-08 62.8 198 28.8
arahy.Tifrunner.gnm1.ann1.P2H8QY Arachis hypogaea HOM05D004885 ORTHO05D006124 2.5e-08 62.8 198 28.8
Medtr5g024150 Medicago truncatula HOM05D004885 ORTHO05D006124 2.5e-08 62.8 194 27.8
Ca_24977_v3 Cicer arietinum L. HOM05D004885 ORTHO05D006124 3.3e-08 62.4 199 28.1
Lj4C235G2 Lonicera japonica HOM05D004885 ORTHO05D006124 3.3e-08 62.4 153 30.1
CDE08G1303 Ceratophyllum demersum HOM05D004885 ORTHO05D006124 4.3e-08 62.0 198 28.3
VMungo1215G0823 Vigna mungo HOM05D004885 ORTHO05D006124 4.3e-08 62.0 197 29.9
Potri.005G030000 Populus trichocarpa HOM05D004885 ORTHO05D006124 5.7e-08 61.6 153 33.3
CANSAT80G0225 Cannabis sativa HOM05D004885 ORTHO05D006124 1.3e-07 60.5 197 27.9
Ciclev10025327m.g Citrus clementina HOM05D004885 ORTHO05D006124 1.3e-07 60.5 201 27.9
Duzib147G0190 Durio zibethinus HOM05D004885 ORTHO05D006124 1.7e-07 60.1 159 29.6
BraA05t22870Z Brassica rapa HOM05D004885 ORTHO05D006124 2.8e-07 59.3 206 25.2
MD10G1065000 Malus domestica HOM05D004885 ORTHO05D006124 2.8e-07 59.3 136 33.1
Manes.01G155100 Manihot esculenta HOM05D004885 ORTHO05D006124 2.8e-07 59.3 201 27.4
Migut.C00024 Erythranthe guttata HOM05D004885 ORTHO05D006124 3.7e-07 58.9 205 24.4
FvH4_1g10450 Fragaria vesca HOM05D004885 ORTHO05D006124 3.7e-07 58.9 204 26.0
TWI09G0982 Tripterygium wilfordii HOM05D004885 ORTHO05D006124 3.7e-07 58.9 201 28.4
AT3G06540 Arabidopsis thaliana HOM05D004885 ORTHO05D006124 6.3e-07 58.2 203 28.1
FAN28G2162 Fragaria x ananassa HOM05D004885 ORTHO05D006124 6.3e-07 58.2 204 26.0
FAN26G3465 Fragaria x ananassa HOM05D004885 ORTHO05D006124 8.2e-07 57.8 180 28.9
Gohir.A07G170900 Gossypium hirsutum HOM05D004885 ORTHO05D006124 8.2e-07 57.8 160 30.6
MBI01_g31987_MAGBIO Magnolia biondii HOM05D004885 ORTHO05D006124 8.2e-07 57.8 163 30.1
C05p60690 Brassica napus HOM05D001895 ORTHO05D002082 1.1e-06 57.4 203 26.6
Prupe.7G181700 Prunus persica HOM05D004885 ORTHO05D006124 1.1e-06 57.4 156 30.8
BolC5t34729H Brassica oleracea HOM05D004885 ORTHO05D006124 1.4e-06 57.0 203 26.1
Glyma.11G085700 Glycine max HOM05D004885 ORTHO05D006124 1.4e-06 57.0 200 27.5
Gohir.D07G177700 Gossypium hirsutum HOM05D004885 ORTHO05D006124 1.4e-06 57.0 159 32.7
Gorai.001G198800 Gossypium raimondii HOM05D004885 ORTHO05D006124 1.4e-06 57.0 159 32.7
EL10Ac8g19196 Beta vulgaris HOM05D004885 ORTHO05D006124 1.8e-06 56.6 209 27.8
CiPaw.06G030500 Carya illinoinensis HOM05D004885 ORTHO05D006124 1.8e-06 56.6 199 26.1
MD17G1057100 Malus domestica HOM05D004885 ORTHO05D006124 1.8e-06 56.6 198 27.3
AL3G17570 Arabidopsis lyrata HOM05D004885 ORTHO05D006124 2.4e-06 56.2 204 29.4
BcaNung06662 Brassica carinata HOM05D004885 ORTHO05D006124 2.4e-06 56.2 171 29.2
QL04p013021 Quercus lobata HOM05D004885 ORTHO05D006124 2.4e-06 56.2 188 27.1
Lsat_1_v5_gn_2_73361 Lactuca sativa HOM05D004885 ORTHO05D006124 5.3e-06 55.1 165 27.3
A05p41490 Brassica napus HOM05D001895 ORTHO05D002082 9.1e-06 54.3 203 24.6
Cc07_g11780 Coffea canephora HOM05D004885 ORTHO05D006124 9.1e-06 54.3 203 26.6
Hma1.2p1_0085F.1_g044730 Hydrangea macrophylla HOM05D004885 ORTHO05D006124 9.1e-06 54.3 201 26.4
Phvul.002G116400 Phaseolus vulgaris HOM05D004885 ORTHO05D006124 9.1e-06 54.3 194 27.8


User provided reference genes

Program Settings