Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 1.1e-256 889.4 450 100.0
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 4.2e-251 870.9 450 98.0
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 5.0e-204 714.5 461 77.4
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 2.1e-202 709.1 461 77.0
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 3.6e-202 708.4 461 79.2
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 4.0e-201 704.9 461 76.8
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 5.2e-201 704.5 462 78.6
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 5.2e-201 704.5 459 78.0
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 1.8e-198 696.0 461 75.7
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 3.1e-198 695.3 455 78.2
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 7.0e-198 694.1 459 75.8
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 2.3e-196 689.1 482 74.5
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 1.5e-195 686.4 456 75.4
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 3.3e-195 685.3 459 76.7
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 3.3e-195 685.3 455 75.8
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 5.5e-195 684.5 461 75.1
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 2.1e-194 682.6 467 76.2
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 2.1e-194 682.6 461 76.1
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 2.8e-194 682.2 460 75.2
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 2.8e-194 682.2 461 75.7
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 2.8e-194 682.2 461 74.8
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 6.1e-194 681.0 460 75.4
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 6.1e-194 681.0 461 74.8
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 1.4e-193 679.9 462 74.9
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 1.4e-193 679.9 468 75.0
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 4.0e-193 678.3 462 74.9
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 1.5e-192 676.4 458 75.3
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 2.6e-192 675.6 462 74.9
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 4.4e-192 674.9 461 74.2
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 1.3e-191 673.3 451 75.6
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 2.2e-191 672.5 461 73.8
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 2.2e-191 672.5 449 76.4
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 2.2e-191 672.5 479 72.7
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 8.3e-191 670.6 460 74.1
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 1.1e-190 670.2 461 73.8
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 1.4e-190 669.8 461 73.8
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 1.8e-190 669.5 461 73.8
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 3.1e-190 668.7 469 74.8
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 5.4e-190 667.9 461 74.0
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 7.0e-190 667.5 453 74.8
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 2.7e-189 665.6 461 74.4
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 2.7e-189 665.6 461 74.6
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.7e-189 665.6 462 72.9
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 5.9e-189 664.5 460 73.5
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 5.9e-189 664.5 462 73.4
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 7.8e-189 664.1 461 72.7
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.7e-188 662.9 460 73.3
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 3.8e-188 661.8 462 73.4
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 3.8e-188 661.8 462 71.9
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 5.0e-188 661.4 461 73.1
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 6.6e-188 661.0 461 72.5
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 4.3e-187 658.3 468 71.2
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 5.6e-187 657.9 468 73.3
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 5.6e-187 657.9 464 73.1
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 5.6e-187 657.9 464 72.2
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 1.2e-186 656.8 465 72.7
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 1.6e-186 656.4 425 78.4
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 2.1e-186 656.0 455 73.8
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 2.8e-186 655.6 461 71.8
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 8.0e-186 654.1 460 73.7
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 8.0e-186 654.1 468 70.3
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 1.4e-185 653.3 425 77.9
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 1.8e-185 652.9 465 72.3
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 1.8e-185 652.9 461 72.0
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 2.3e-185 652.5 461 72.5
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 2.3e-185 652.5 455 73.8
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 3.0e-185 652.1 459 72.8
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 3.0e-185 652.1 459 74.7
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 1.5e-184 649.8 461 70.9
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 2.0e-184 649.4 509 67.4
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 4.4e-184 648.3 459 73.0
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 5.8e-184 647.9 458 72.1
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 5.8e-184 647.9 493 69.4
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 1.7e-183 646.4 461 70.5
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 2.9e-183 645.6 459 72.8
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 3.7e-183 645.2 469 70.1
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 4.9e-183 644.8 459 71.0
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 4.9e-183 644.8 459 71.0
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 4.9e-183 644.8 459 71.0
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 8.3e-183 644.0 435 75.6
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 1.4e-182 643.3 460 71.1
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 2.4e-182 642.5 461 70.9
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 3.2e-182 642.1 440 73.6
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 1.2e-181 640.2 461 70.1
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 2.0e-181 639.4 460 70.4
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 7.8e-181 637.5 467 70.2
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 1.3e-180 636.7 468 71.6
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 8.6e-180 634.0 468 71.4
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 4.3e-179 631.7 468 70.9
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 7.3e-179 630.9 416 74.5
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 7.3e-179 630.9 460 69.3
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 2.8e-178 629.0 467 70.7
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 6.2e-178 627.9 465 69.0
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.4e-177 626.7 465 71.0
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.8e-177 626.3 463 69.1
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 2.3e-177 625.9 464 69.4
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 3.1e-177 625.5 456 70.8
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 8.9e-177 624.0 454 71.1
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.6e-176 622.5 464 71.6
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 6.4e-175 617.8 415 74.0
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 1.9e-174 616.3 405 73.6
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.2e-173 613.6 487 65.7
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 1.8e-169 599.7 448 67.4
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 4.9e-167 591.7 455 64.4
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 9.2e-166 587.4 398 72.4
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 2.3e-164 582.8 456 66.2
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 7.3e-163 577.8 388 73.7
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 2.1e-162 576.2 461 65.3
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 1.4e-161 573.5 415 72.8
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 1.3e-159 567.0 415 67.7
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 9.6e-139 497.7 414 60.6
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 2.8e-138 496.1 380 68.2
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 1.1e-137 494.2 316 79.1
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 4.9e-135 485.3 416 58.7
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 1.5e-128 463.8 402 57.0
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 2.9e-119 433.0 456 53.5
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.8e-105 387.1 410 53.7
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 6.1e-101 372.1 274 67.5
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 5.2e-100 369.0 258 73.6
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 1.0e-95 354.8 535 38.3
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 1.7e-74 284.3 187 76.5
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 1.6e-72 277.7 264 56.1
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 5.4e-65 252.7 244 56.1
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 7.0e-65 252.3 244 56.1
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 1.2e-53 214.9 206 60.7
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 2.4e-44 184.1 145 66.9
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 4.0e-44 183.3 167 61.1
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 1.3e-42 178.3 119 79.0
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 6.4e-42 176.0 146 64.4
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 4.4e-35 153.3 123 65.9
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 3.8e-34 150.2 385 31.4
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 2.8e-21 107.5 60 83.3
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 3.2e-17 94.0 57 82.5
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 1.0e-15 89.0 59 72.9
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 1.3e-15 88.6 70 70.0
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 8.4e-10 69.3 65 58.5


User provided reference genes

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