Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5336 Papaver somniferum HOM05D006377 ORTHO05D008001 3.4e-107 391.7 204 100.0
PSO761G0064 Papaver somniferum HOM05D006377 ORTHO05D008001 1.8e-100 369.4 204 96.1
TAR365G0273 Trochodendron aralioides HOM05D006377 ORTHO05D008001 2.1e-64 249.6 204 64.7
Nn2g12517 Nelumbo nucifera HOM05D006377 ORTHO05D008001 2.7e-64 249.2 204 63.7
CSS0017897 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 7.4e-62 241.1 208 64.4
Aqoxy2G02484 Aquilegia oxysepala HOM05D006377 ORTHO05D008001 9.6e-62 240.7 218 60.6
CSS0039444 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 2.8e-61 239.2 204 64.7
Prupe.6G338600 Prunus persica HOM05D006377 ORTHO05D008001 8.1e-61 237.7 212 61.8
Cfa006472 Carpinus fangiana HOM05D006377 ORTHO05D008001 9.0e-60 234.2 206 61.7
Haze_04319 Corylus avellana HOM05D006377 ORTHO05D008001 1.5e-59 233.4 206 61.2
MD12G1236300 Malus domestica HOM05D006377 ORTHO05D008001 2.0e-59 233.0 209 60.8
vmacro05068 Vaccinium macrocarpon HOM05D006377 ORTHO05D008001 3.4e-59 232.3 215 59.1
Cc02_g31420 Coffea canephora HOM05D006377 ORTHO05D008001 9.9e-59 230.7 212 59.9
Actinidia05760 Actinidia chinensis HOM05D006377 ORTHO05D008001 1.3e-58 230.3 208 65.4
FAN14G3144 Fragaria x ananassa HOM05D006377 ORTHO05D008001 4.9e-58 228.4 212 59.4
RcHm_v2.0_Chr3g0452211 Rosa chinensis HOM05D006377 ORTHO05D008001 1.1e-57 227.3 204 60.8
FvH4_6g03680 Fragaria vesca HOM05D006377 ORTHO05D008001 1.9e-57 226.5 212 59.9
FAN05G1987 Fragaria x ananassa HOM05D006377 ORTHO05D008001 2.4e-57 226.1 212 57.5
FAN05G4075 Fragaria x ananassa HOM05D006377 ORTHO05D008001 2.4e-57 226.1 212 57.5
QL03p023258 Quercus lobata HOM05D006377 ORTHO05D008001 4.2e-57 225.3 205 59.5
CiPaw.08G178700 Carya illinoinensis HOM05D006377 ORTHO05D008001 2.7e-56 222.6 204 59.8
Ciclev10002532m.g Citrus clementina HOM05D006377 ORTHO05D008001 4.6e-56 221.9 216 57.4
QL03p023964 Quercus lobata HOM05D006377 ORTHO05D008001 4.6e-56 221.9 205 59.0
Sc20g0000200 Simmondsia chinensis HOM05D006377 ORTHO05D008001 7.9e-56 221.1 212 57.5
THA.LOC104805815 Tarenaya hassleriana HOM05D006377 ORTHO05D008001 1.0e-55 220.7 209 57.4
EL10Ac4g09192 Beta vulgaris HOM05D006377 ORTHO05D008001 1.8e-55 219.9 215 56.7
Rhsim07G0175800 Rhododendron simsii HOM05D006377 ORTHO05D008001 2.3e-55 219.5 206 59.7
PGR004G2824 Punica granatum HOM05D006377 ORTHO05D008001 5.1e-55 218.4 211 57.3
ECA238G1597 Erigeron canadensis HOM05D006377 ORTHO05D008001 8.7e-55 217.6 204 57.8
FAN09G4008 Fragaria x ananassa HOM05D006377 ORTHO05D008001 1.5e-54 216.9 205 58.5
TWI36G1766 Tripterygium wilfordii HOM05D006377 ORTHO05D008001 1.5e-54 216.9 212 56.1
ClCG02G016370 Citrullus lanatus HOM05D006377 ORTHO05D008001 1.9e-54 216.5 202 58.4
Manes.08G127500 Manihot esculenta HOM05D006377 ORTHO05D008001 1.9e-54 216.5 219 55.7
MD04G1219300 Malus domestica HOM05D006377 ORTHO05D008001 3.3e-54 215.7 220 55.9
Lsat_1_v5_gn_2_67840 Lactuca sativa HOM05D006377 ORTHO05D008001 4.3e-54 215.3 177 62.1
MBI19_g37073_MAGBIO Magnolia biondii HOM05D006377 ORTHO05D008001 2.8e-53 212.6 207 57.5
Nitab4.5_0002840g0030 Nicotiana tabacum HOM05D006377 ORTHO05D008001 2.8e-53 212.6 208 56.7
Potri.013G035700 Populus trichocarpa HOM05D006377 ORTHO05D008001 2.8e-53 212.6 209 56.0
Ah.06g192660 Amaranthus hybridus HOM05D006377 ORTHO05D008001 3.7e-53 212.2 206 58.7
MELO3C004358.2 Cucumis melo HOM05D006377 ORTHO05D008001 4.8e-53 211.8 204 58.3
Sed0019582 Sechium edule HOM05D006377 ORTHO05D008001 4.8e-53 211.8 203 56.7
PGSC0003DMG400022504 Solanum tuberosum HOM05D006377 ORTHO05D008001 4.8e-53 211.8 208 56.7
Duzib177G1058 Durio zibethinus HOM05D006377 ORTHO05D008001 6.2e-53 211.5 212 57.1
Gorai.007G285800 Gossypium raimondii HOM05D006377 ORTHO05D008001 6.2e-53 211.5 205 57.1
Hma1.2p1_0332F.1_g127770 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 6.2e-53 211.5 200 59.5
Solyc01g097910.2 Solanum lycopersicum HOM05D006377 ORTHO05D008001 6.2e-53 211.5 208 56.7
Sopen01g041500 Solanum pennellii HOM05D006377 ORTHO05D008001 8.1e-53 211.1 208 56.7
Gohir.D11G265800 Gossypium hirsutum HOM05D006377 ORTHO05D008001 1.1e-52 210.7 211 56.4
Lj1g0014721 Lotus japonicus HOM05D006377 ORTHO05D008001 1.1e-52 210.7 202 55.9
Gohir.A11G256100 Gossypium hirsutum HOM05D006377 ORTHO05D008001 1.4e-52 210.3 211 56.4
Nitab4.5_0002361g0100 Nicotiana tabacum HOM05D006377 ORTHO05D008001 5.3e-52 208.4 208 55.8
Oeu012478.1 Olea europaea HOM05D006377 ORTHO05D008001 9.0e-52 207.6 205 56.6
Atru.chr2.718 Acer truncatum HOM05D006377 ORTHO05D008001 2.0e-51 206.5 150 70.0
CsaV3_2G004360 Cucumis sativus L. HOM05D006377 ORTHO05D008001 2.0e-51 206.5 202 56.4
Potri.005G049000 Populus trichocarpa HOM05D006377 ORTHO05D008001 2.6e-51 206.1 211 55.5
Thecc.05G289700 Theobroma cacao HOM05D006377 ORTHO05D008001 4.5e-51 205.3 209 56.0
CDE01G0680 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 5.8e-51 204.9 212 53.3
Dinv11572 Davidia involucrata HOM05D006377 ORTHO05D008001 1.0e-50 204.1 194 56.7
Oeu027050.1 Olea europaea HOM05D006377 ORTHO05D008001 1.0e-50 204.1 205 54.6
MSTRG.3650 Avicennia marina HOM05D006377 ORTHO05D008001 1.3e-50 203.8 207 54.1
CAN.G134.174 Capsicum annuum HOM05D006377 ORTHO05D008001 1.3e-50 203.8 203 55.2
Lalb_Chr15g0076921 Lupinus albus HOM05D006377 ORTHO05D008001 1.3e-50 203.8 178 61.2
HanXRQChr04g0094091 Helianthus annuus HOM05D006377 ORTHO05D008001 1.7e-50 203.4 157 66.2
AT1G54500 Arabidopsis thaliana HOM05D006377 ORTHO05D008001 4.9e-50 201.8 172 61.0
FAN02G4534 Fragaria x ananassa HOM05D006377 ORTHO05D008001 6.5e-50 201.4 167 64.7
CDE12G0044 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 8.4e-50 201.1 202 55.0
SGA_v2.0_scaffold35G13993 Striga asiatica HOM05D006377 ORTHO05D008001 8.4e-50 201.1 154 64.3
Lj7P475T32 Lonicera japonica HOM05D006377 ORTHO05D008001 1.1e-49 200.7 212 55.2
arahy.Tifrunner.gnm1.ann1.VW98FE Arachis hypogaea HOM05D006377 ORTHO05D008001 2.5e-49 199.5 118 79.7
AL1G64910 Arabidopsis lyrata HOM05D006377 ORTHO05D008001 3.2e-49 199.1 172 60.5
Glyma.03G245100 Glycine max HOM05D006377 ORTHO05D008001 3.2e-49 199.1 173 60.1
unitig_0.g1675 Utricularia gibba HOM05D006377 ORTHO05D008001 3.2e-49 199.1 156 62.8
CARHR055600 Cardamine hirsuta HOM05D006377 ORTHO05D008001 4.2e-49 198.7 176 60.8
Medtr7g114590 Medicago truncatula HOM05D006377 ORTHO05D008001 4.2e-49 198.7 200 53.0
Phvul.006G099300 Phaseolus vulgaris HOM05D006377 ORTHO05D008001 4.2e-49 198.7 204 55.4
Migut.E01572 Erythranthe guttata HOM05D006377 ORTHO05D008001 5.5e-49 198.4 138 71.0
Carub.0002s0934 Capsella rubella HOM05D006377 ORTHO05D008001 7.1e-49 198.0 176 59.7
Ca_09403_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 9.3e-49 197.6 127 74.8
Ca_30164_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 9.3e-49 197.6 127 74.8
Cpa.g.sc264.18 Carica papaya HOM05D006377 ORTHO05D008001 3.5e-48 195.7 124 75.0
Actinidia30919 Actinidia chinensis HOM05D006377 ORTHO05D008001 6.0e-48 194.9 178 60.7
Peaxi162Scf00404g00014 Petunia axillaris HOM05D006377 ORTHO05D008001 6.0e-48 194.9 198 54.0
BcaB02g08603 Brassica carinata HOM05D006377 ORTHO05D008001 3.0e-47 192.6 171 62.6
Thhalv10023702m.g Eutrema salsugineum HOM05D006377 ORTHO05D008001 3.0e-47 192.6 171 57.9
SalBow5G2979 Salvia bowleyana HOM05D006377 ORTHO05D008001 3.0e-47 192.6 204 58.3
TPR.G7004 Trifolium pratense HOM05D006377 ORTHO05D008001 5.1e-47 191.8 196 53.6
C04p41160 Brassica napus HOM05D006377 ORTHO05D008001 6.7e-47 191.4 150 64.7
BolC4t25698H Brassica oleracea HOM05D006377 ORTHO05D008001 6.7e-47 191.4 150 64.7
Os08g0323400 Oryza sativa ssp. japonica HOM05D006377 ORTHO05D008001 6.7e-47 191.4 187 54.5
BcaC02g09303 Brassica carinata HOM05D006377 ORTHO05D008001 8.7e-47 191.0 158 62.0
A04p07500 Brassica napus HOM05D006377 ORTHO05D008001 8.7e-47 191.0 158 62.0
BraA04t16445Z Brassica rapa HOM05D006377 ORTHO05D008001 8.7e-47 191.0 150 64.7
VMungo0540G1412 Vigna mungo HOM05D006377 ORTHO05D008001 8.7e-47 191.0 204 53.4
Aa31LG2G12300 Aethionema arabicum HOM05D006377 ORTHO05D008001 1.1e-46 190.7 204 50.5
Zm00001eb061720 Zea mays HOM05D006377 ORTHO05D008001 1.5e-46 190.3 113 77.0
SpUn0001_0720 Schrenkiella parvula HOM05D006377 ORTHO05D008001 2.5e-46 189.5 129 69.8
Zm00001eb061690 Zea mays HOM05D006377 ORTHO05D008001 2.5e-46 189.5 113 77.0
Zm00001eb140200 Zea mays HOM05D006377 ORTHO05D008001 3.3e-46 189.1 158 58.9
Sabra05G0044300 Salix brachista HOM05D006377 ORTHO05D008001 4.3e-46 188.7 138 66.7
HPP92_001948 Vanilla planifolia HOM05D006377 ORTHO05D008001 1.3e-45 187.2 204 51.5
Sabra13G0035000 Salix brachista HOM05D006377 ORTHO05D008001 3.7e-45 185.7 163 59.5
AUR62000968 Chenopodium quinoa HOM05D006377 ORTHO05D008001 8.2e-45 184.5 192 54.2
AagrBONN_evm.TU.Sc2ySwM_344.5347 Anthoceros agrestis HOM05D006377 ORTHO05D008001 1.1e-44 184.1 164 54.3
Zm00001eb061700 Zea mays HOM05D006377 ORTHO05D008001 1.1e-44 184.1 185 52.4
ATR0796G227 Amborella trichopoda HOM05D006377 ORTHO05D008001 3.1e-44 182.6 185 54.1
AagrBONN_evm.TU.Sc2ySwM_368.50 Anthoceros agrestis HOM05D006377 ORTHO05D008001 5.3e-44 181.8 146 58.9
SEGI_38373 Sequoiadendron giganteum HOM05D006377 ORTHO05D008001 9.0e-44 181.0 209 49.8
Zm00001eb061670 Zea mays HOM05D006377 ORTHO05D008001 1.5e-43 180.3 150 59.3
Duzib128G0229 Durio zibethinus HOM05D006377 ORTHO05D008001 2.9e-42 176.0 180 53.9
Pp3c1_22450 Physcomitrium patens HOM05D006377 ORTHO05D008001 5.0e-42 175.3 164 55.5
Psat5g039080 Pisum sativum HOM05D006377 ORTHO05D008001 5.0e-42 175.3 177 53.1
Mapoly0032s0089 Marchantia polymorpha HOM05D006377 ORTHO05D008001 8.5e-42 174.5 178 50.0
Zm00001eb061710 Zea mays HOM05D006377 ORTHO05D008001 1.2e-40 170.6 166 53.0
AagrBONN_evm.TU.Sc2ySwM_368.3396 Anthoceros agrestis HOM05D006377 ORTHO05D008001 1.6e-40 170.2 148 55.4
Pp3c2_13970 Physcomitrium patens HOM05D006377 ORTHO05D008001 6.1e-40 168.3 118 66.9
Manes.09G157000 Manihot esculenta HOM05D006377 ORTHO05D008001 1.8e-39 166.8 177 53.1
SMO137G0026 Selaginella moellendorffii HOM05D006377 ORTHO05D008001 8.7e-39 164.5 108 68.5
AUR62004997 Chenopodium quinoa HOM05D006377 ORTHO05D008001 1.9e-38 163.3 173 52.6
CBR_g55374 Chara braunii HOM05D006377 ORTHO05D008001 9.7e-38 161.0 113 64.6
unitig_748.g7013 Utricularia gibba HOM05D000757 ORTHO05D000622 1.8e-36 156.8 145 54.5
DCAR_009137 Daucus carota HOM05D006377 ORTHO05D008001 5.0e-34 148.7 133 56.4
MCO15G508 Micromonas commoda HOM05D006377 ORTHO05D008001 8.8e-31 137.9 109 57.8
Hma1.2p1_0332F.1_g127760 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 1.5e-30 137.1 152 52.0
Cre07.g315150 Chlamydomonas reinhardtii HOM05D006377 ORTHO05D008001 1.3e-26 124.0 113 51.3
Zm00001eb061680 Zea mays HOM05D006377 ORTHO05D008001 1.2e-24 117.5 137 42.3
PRCOL_00004455 Prasinoderma coloniale HOM05D006377 ORTHO05D008001 3.6e-24 115.9 104 52.9
Hma1.2p1_0332F.1_g127740 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 2.2e-18 96.7 90 55.6
Actinidia36920 Actinidia chinensis HOM05D006377 ORTHO05D057244 4.7e-08 62.4 129 37.2


User provided reference genes

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