Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 1.2e-236 822.8 409 100.0
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 1.5e-236 822.4 409 99.8
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 8.3e-198 693.7 414 82.1
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 3.9e-195 684.9 414 82.4
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 2.8e-193 678.7 413 81.6
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 5.6e-186 654.4 411 79.3
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 5.6e-186 654.4 411 79.3
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 7.3e-186 654.1 411 79.3
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 8.9e-184 647.1 418 76.3
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 3.0e-179 632.1 411 77.1
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 1.2e-177 626.7 411 75.9
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 2.4e-176 622.5 411 74.5
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 5.2e-176 621.3 414 74.9
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 8.9e-176 620.5 415 74.0
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 2.2e-174 615.9 415 74.5
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.2e-174 615.9 414 74.4
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 1.1e-173 613.6 412 74.0
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 3.2e-173 612.1 422 72.7
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 4.2e-173 611.7 415 74.0
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.2e-172 610.1 411 74.5
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 2.1e-172 609.4 406 76.1
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 4.6e-172 608.2 410 72.7
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 3.9e-171 605.1 410 72.4
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 3.9e-171 605.1 417 73.4
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.1e-170 603.6 438 70.5
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 4.7e-169 598.2 424 71.9
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 1.4e-168 596.7 425 72.0
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 2.4e-168 595.9 423 71.6
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 2.4e-168 595.9 417 72.2
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 2.0e-167 592.8 425 70.4
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 2.6e-167 592.4 423 70.7
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 7.6e-167 590.9 423 70.7
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 4.9e-166 588.2 421 70.1
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 4.9e-166 588.2 423 69.7
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 6.4e-166 587.8 409 70.4
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 6.4e-166 587.8 423 70.2
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 9.3e-165 583.9 423 69.3
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 1.2e-164 583.6 417 70.0
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 6.0e-164 581.3 418 70.6
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 7.8e-164 580.9 418 70.6
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 3.0e-163 578.9 415 69.9
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 3.0e-163 578.9 417 71.0
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 5.1e-163 578.2 409 69.4
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 3.3e-162 575.5 415 68.9
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 7.3e-162 574.3 413 71.2
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 2.1e-161 572.8 413 70.5
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 2.8e-161 572.4 410 71.2
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 6.2e-161 571.2 421 70.5
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 4.0e-160 568.5 410 68.8
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 2.6e-159 565.8 423 69.0
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 5.8e-159 564.7 418 68.2
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 2.4e-157 559.3 417 68.3
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 9.3e-157 557.4 410 68.5
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 1.2e-156 557.0 416 69.0
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 6.0e-156 554.7 418 68.2
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 1.8e-155 553.1 417 67.9
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 2.3e-155 552.7 410 67.3
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 6.7e-155 551.2 417 68.1
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 8.7e-155 550.8 412 68.7
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 8.7e-155 550.8 410 67.8
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 1.1e-154 550.4 409 68.2
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 1.3e-153 547.0 418 67.2
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 1.3e-153 547.0 416 67.8
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 2.1e-153 546.2 411 68.1
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 9.0e-152 540.8 409 67.5
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 5.8e-151 538.1 418 67.0
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 9.9e-151 537.3 422 66.1
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 6.4e-150 534.6 417 66.4
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 1.1e-149 533.9 417 66.4
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 1.9e-149 533.1 415 66.7
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 1.9e-149 533.1 415 66.7
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 1.9e-149 533.1 415 66.7
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 3.2e-149 532.3 414 66.7
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 7.1e-149 531.2 409 66.0
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 2.7e-148 529.3 409 65.8
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 2.7e-148 529.3 409 65.8
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 3.7e-145 518.8 416 66.1
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 3.7e-145 518.8 424 65.1
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 3.1e-144 515.8 408 64.5
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 5.3e-144 515.0 425 64.5
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 2.6e-143 512.7 409 66.3
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 1.0e-142 510.8 410 65.9
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 2.9e-142 509.2 422 64.0
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 6.5e-142 508.1 409 64.3
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 2.5e-141 506.1 404 65.1
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 3.5e-140 502.3 410 63.4
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 1.8e-139 500.0 415 62.7
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 5.1e-139 498.4 387 66.4
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 9.7e-138 494.2 406 62.6
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 2.8e-137 492.7 405 63.5
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 1.8e-136 490.0 476 56.5
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 1.2e-132 477.2 402 62.9
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 1.8e-128 463.4 364 66.2
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 5.5e-125 451.8 408 59.8
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 2.4e-120 436.4 464 50.6
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 1.2e-119 434.1 409 56.2
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 1.3e-118 430.6 251 85.7
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 1.7e-110 403.7 349 61.3
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 1.1e-109 401.0 254 79.1
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 6.3e-105 385.2 239 79.9
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 4.7e-100 369.0 472 43.9
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 1.5e-98 364.0 414 48.3
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 1.6e-95 354.0 416 48.1
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.3e-94 350.9 298 62.4
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 1.9e-93 347.1 470 43.6
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.7e-89 334.0 248 68.5
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 5.0e-78 295.8 439 41.2
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 7.3e-77 292.0 287 55.7
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 1.1e-75 288.1 182 76.9
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 1.3e-44 184.9 163 52.8
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 6.7e-38 162.5 499 27.9
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 1.3e-36 158.3 172 47.1
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 1.4e-35 154.8 484 26.7
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 2.6e-34 150.6 444 29.1
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 4.2e-32 143.3 195 44.6
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 6.7e-30 136.0 165 45.5
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 1.9e-24 117.9 108 55.6
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 1.2e-23 115.2 98 62.2
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 3.0e-22 110.5 70 77.1
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 6.7e-14 82.8 126 39.7


User provided reference genes

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