Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G4815 Papaver somniferum HOM05D002270 ORTHO05D002866 7.6e-175 617.5 412 100.0
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 2.0e-114 416.8 353 67.7
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 3.3e-109 399.4 360 70.6
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 1.7e-57 227.6 370 48.4
TAR636G2809 Trochodendron aralioides HOM05D002270 ORTHO05D002866 4.2e-56 223.0 364 45.3
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 1.1e-53 214.9 341 44.0
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 4.1e-51 206.5 370 41.1
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 4.1e-51 206.5 368 42.7
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 4.5e-50 203.0 366 41.3
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 1.7e-49 201.1 350 42.0
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 3.8e-49 199.9 355 44.2
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 1.4e-48 198.0 360 39.4
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 1.8e-46 191.0 369 43.4
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 1.8e-46 191.0 367 38.4
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 4.8e-44 183.0 375 37.3
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 8.2e-44 182.2 344 40.7
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 1.4e-43 181.4 367 38.7
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 2.4e-43 180.6 367 39.0
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 4.1e-43 179.9 374 44.7
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 9.0e-43 178.7 374 44.4
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 2.2e-41 174.1 350 36.3
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 3.8e-41 173.3 356 39.0
QL03p018747 Quercus lobata HOM05D002270 ORTHO05D002866 1.9e-40 171.0 365 41.1
Aqoxy6G02933 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 4.2e-40 169.9 177 56.5
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 5.5e-40 169.5 373 42.9
vmacro22216 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 3.6e-39 166.8 362 35.6
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 1.8e-38 164.5 371 43.9
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 3.9e-38 163.3 365 35.3
MBI17_g19031_MAGBIO Magnolia biondii HOM05D002270 ORTHO05D002866 7.4e-37 159.1 320 38.8
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 9.7e-37 158.7 419 33.9
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 2.2e-36 157.5 362 35.9
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 2.8e-36 157.1 345 35.7
Hma1.2p1_0291F.1_g115290 Hydrangea macrophylla HOM05D002270 ORTHO05D002866 2.8e-36 157.1 202 47.5
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 6.3e-36 156.0 367 35.7
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 1.4e-35 154.8 388 35.1
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 6.9e-35 152.5 366 37.2
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 5.9e-34 149.4 367 36.8
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 3.8e-33 146.7 365 35.6
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 5.0e-33 146.4 350 36.6
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 1.4e-32 144.8 365 34.8
Eucgr.J02836 Eucalyptus grandis HOM05D002270 ORTHO05D002866 1.9e-32 144.4 341 42.8
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 2.5e-32 144.1 426 31.9
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 5.5e-32 142.9 381 34.1
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 7.2e-32 142.5 190 44.7
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 9.4e-32 142.1 315 38.4
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 1.2e-31 141.7 362 37.3
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 2.1e-31 141.0 368 34.2
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 2.7e-31 140.6 366 35.5
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 1.8e-30 137.9 374 38.0
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 5.2e-30 136.3 334 34.7
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 2.0e-29 134.4 338 32.5
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 2.0e-29 134.4 337 33.2
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 4.4e-29 133.3 376 33.0
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 9.7e-29 132.1 362 40.1
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 6.3e-28 129.4 366 33.1
FAN09G1018 Fragaria x ananassa HOM05D002270 ORTHO05D002866 8.2e-28 129.0 356 34.0
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 1.8e-27 127.9 359 34.8
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 2.4e-27 127.5 199 39.2
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 3.1e-27 127.1 367 33.0
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 5.3e-27 126.3 220 37.7
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 7.0e-27 125.9 357 38.1
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 9.1e-27 125.6 373 31.6
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 2.0e-26 124.4 199 38.7
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 1.3e-25 121.7 412 39.6
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea HOM05D002270 ORTHO05D002866 5.0e-25 119.8 402 30.3
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 4.2e-24 116.7 365 38.1
PGSC0003DMG400044228 Solanum tuberosum HOM05D002270 ORTHO05D002866 1.6e-23 114.8 217 39.2
Ah.08g216550 Amaranthus hybridus HOM05D002270 ORTHO05D002866 2.7e-23 114.0 307 31.6
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 2.7e-23 114.0 332 32.8
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 8.0e-23 112.5 403 30.0
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 3.0e-22 110.5 361 32.7
PGSC0003DMG400021645 Solanum tuberosum HOM05D002270 ORTHO05D002866 4.0e-22 110.2 162 45.1
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 2.0e-21 107.8 356 35.4
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 2.6e-21 107.5 400 29.0
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 4.4e-21 106.7 343 32.1
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 4.4e-21 106.7 365 33.4
VMungo0464G0658 Vigna mungo HOM05D002270 ORTHO05D002866 4.4e-21 106.7 432 31.2
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 5.7e-21 106.3 410 31.0
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 9.7e-21 105.5 372 32.8
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 9.7e-21 105.5 207 37.2
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 1.3e-20 105.1 345 31.6
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 2.8e-20 104.0 346 30.3
ATR0736G011 Amborella trichopoda HOM05D002270 ORTHO05D002866 3.7e-20 103.6 367 33.0
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 3.1e-19 100.5 340 37.4
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 4.1e-19 100.1 353 31.4
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 1.6e-18 98.2 343 34.1
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 3.5e-18 97.1 364 28.6
Sp5g22050 Schrenkiella parvula HOM05D002270 ORTHO05D002866 3.5e-18 97.1 357 33.9
TPR.G10921 Trifolium pratense HOM05D002270 ORTHO05D002866 7.7e-18 95.9 355 29.3
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 1.0e-17 95.5 368 37.5
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 2.2e-17 94.4 355 28.5
BcaNung06980 Brassica carinata HOM05D002270 ORTHO05D002866 2.9e-17 94.0 151 40.4
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 2.9e-17 94.0 201 35.3
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 1.9e-16 91.3 175 36.6
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 7.2e-16 89.4 374 29.1
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 7.2e-16 89.4 410 28.0
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 9.4e-16 89.0 405 31.9
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 2.1e-15 87.8 337 32.6
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 2.1e-15 87.8 337 32.6
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 2.3e-14 84.3 195 34.4
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 2.0e-13 81.3 411 30.2
TPR.G9775 Trifolium pratense HOM05D002270 ORTHO05D002866 4.4e-13 80.1 310 29.0
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 9.8e-13 79.0 401 28.9
Os10g0456900 Oryza sativa ssp. japonica HOM05D002270 ORTHO05D002866 1.3e-12 78.6 139 37.4
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 2.0e-10 71.2 219 29.2
SEGI_24649 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 2.7e-10 70.9 375 31.5
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 3.5e-10 70.5 358 27.1
BcaB03g13736 Brassica carinata HOM05D002270 ORTHO05D002866 4.5e-10 70.1 71 53.5
CDE12G0087 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 1.3e-09 68.6 277 29.2
SEGI_09123 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 9.5e-08 62.4 131 34.4
SEGI_29020 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 2.7e-07 60.8 217 28.6


User provided reference genes

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