Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 4.1e-212 741.1 370 100.0
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 1.5e-209 732.6 370 98.4
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 2.6e-174 615.5 368 80.4
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 9.9e-174 613.6 368 80.2
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 7.3e-169 597.4 368 76.9
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 7.3e-169 597.4 368 77.4
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 1.6e-168 596.3 368 76.6
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 1.6e-168 596.3 368 77.7
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 2.1e-168 595.9 368 77.7
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 6.2e-168 594.3 370 76.8
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 4.0e-167 591.7 368 76.4
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 5.3e-167 591.3 370 77.6
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 9.0e-167 590.5 368 77.2
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 9.0e-167 590.5 368 76.6
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 1.5e-166 589.7 368 76.1
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 2.0e-166 589.3 368 75.5
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 3.4e-166 588.6 365 77.5
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 3.4e-166 588.6 369 75.1
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 4.4e-166 588.2 368 76.6
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 4.4e-166 588.2 369 76.4
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 5.8e-166 587.8 368 76.1
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 5.8e-166 587.8 369 76.7
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 9.9e-166 587.0 369 77.0
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 9.9e-166 587.0 369 76.4
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 1.7e-165 586.3 368 76.9
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 1.7e-165 586.3 368 76.4
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 2.2e-165 585.9 368 76.4
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 2.2e-165 585.9 371 75.5
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 3.8e-165 585.1 368 76.6
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 3.8e-165 585.1 368 76.1
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 4.9e-165 584.7 368 76.9
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 1.1e-164 583.6 368 76.1
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 1.1e-164 583.6 371 75.2
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 1.4e-164 583.2 368 75.5
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 1.4e-164 583.2 371 75.2
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 1.9e-164 582.8 368 75.3
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 2.4e-164 582.4 369 75.6
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 9.3e-164 580.5 369 75.6
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 1.2e-163 580.1 370 75.9
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 1.6e-163 579.7 368 75.0
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 2.1e-163 579.3 368 75.0
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 2.7e-163 578.9 368 75.3
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 7.8e-163 577.4 368 75.3
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 7.8e-163 577.4 368 75.5
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 7.8e-163 577.4 395 71.1
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 1.0e-162 577.0 368 75.3
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.3e-162 576.6 368 76.1
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 1.7e-162 576.2 375 74.4
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 1.7e-162 576.2 368 75.0
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 1.7e-162 576.2 368 75.0
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 1.7e-162 576.2 368 75.0
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 2.3e-162 575.9 368 75.3
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 2.3e-162 575.9 368 75.0
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 3.9e-162 575.1 371 75.2
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 3.9e-162 575.1 388 73.2
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 1.1e-161 573.5 371 74.7
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 1.1e-161 573.5 371 74.9
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 1.1e-161 573.5 369 74.5
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 1.1e-161 573.5 369 73.7
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.5e-161 573.2 371 74.7
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.9e-161 572.8 382 73.0
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 2.5e-161 572.4 368 74.7
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 5.6e-161 571.2 368 74.5
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 5.6e-161 571.2 369 74.0
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 5.6e-161 571.2 369 74.0
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 5.6e-161 571.2 368 74.2
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 9.6e-161 570.5 368 75.0
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 9.6e-161 570.5 372 73.9
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 9.6e-161 570.5 368 74.5
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.3e-160 570.1 368 74.5
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 1.3e-160 570.1 368 73.9
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.3e-160 570.1 371 74.7
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.3e-160 570.1 369 73.7
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 3.6e-160 568.5 368 73.9
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 4.8e-160 568.2 368 73.6
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 4.8e-160 568.2 371 75.2
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 4.8e-160 568.2 369 73.4
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 6.2e-160 567.8 407 68.6
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 6.2e-160 567.8 362 75.7
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 8.1e-160 567.4 369 73.4
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 8.1e-160 567.4 368 74.7
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 2.4e-159 565.8 362 74.9
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 4.0e-159 565.1 368 72.6
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 5.3e-159 564.7 362 74.0
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 6.9e-159 564.3 351 76.1
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 2.0e-158 562.8 369 72.6
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 3.4e-158 562.0 364 74.5
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 4.5e-158 561.6 362 75.1
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 9.9e-158 560.5 369 72.4
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 1.7e-157 559.7 368 73.4
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 4.9e-157 558.1 371 73.9
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 6.4e-157 557.8 357 73.9
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 8.4e-157 557.4 369 73.4
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 8.4e-157 557.4 361 74.0
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 1.1e-156 557.0 369 73.4
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 1.9e-156 556.2 356 74.7
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 3.2e-156 555.4 369 73.2
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 4.2e-156 555.1 368 72.0
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 5.4e-156 554.7 369 74.0
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 5.4e-156 554.7 431 65.0
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 3.5e-155 552.0 358 75.1
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 1.0e-154 550.4 369 71.5
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 1.3e-154 550.1 368 70.1
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 1.8e-154 549.7 370 73.5
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 5.1e-154 548.1 368 73.6
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 1.5e-153 546.6 368 72.3
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 1.9e-153 546.2 369 71.3
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 3.3e-153 545.4 369 70.7
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 3.3e-153 545.4 360 72.5
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 7.4e-153 544.3 366 73.0
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 1.6e-152 543.1 369 71.8
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 2.1e-152 542.7 358 73.5
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 3.7e-152 542.0 369 71.8
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 4.8e-152 541.6 360 71.9
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 4.8e-152 541.6 360 71.9
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 4.8e-152 541.6 360 71.9
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 4.8e-152 541.6 360 71.9
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 4.8e-152 541.6 360 71.9
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 1.1e-151 540.4 400 67.8
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 4.0e-151 538.5 350 74.3
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 6.9e-151 537.7 368 70.4
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 2.0e-150 536.2 351 73.8
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 2.0e-150 536.2 363 71.9
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 3.4e-150 535.4 368 70.7
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 4.5e-150 535.0 373 70.0
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 2.2e-149 532.7 358 72.1
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 4.9e-149 531.6 369 70.7
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 1.9e-148 529.6 368 70.7
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 2.5e-148 529.3 363 71.3
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 7.1e-148 527.7 351 73.5
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 3.5e-147 525.4 363 69.1
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 6.7e-146 521.2 351 72.9
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 1.1e-145 520.4 365 67.9
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 9.6e-145 517.3 360 70.6
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 3.1e-143 512.3 363 69.1
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 3.1e-143 512.3 368 65.8
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 1.1e-140 503.8 361 67.3
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 1.2e-139 500.4 368 65.2
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 1.6e-139 500.0 361 68.7
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 1.5e-137 493.4 368 64.7
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 8.2e-136 487.6 370 63.2
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 3.1e-135 485.7 370 61.9
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 3.1e-135 485.7 395 62.8
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 1.4e-132 476.9 372 62.1
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 9.4e-132 474.2 369 63.7
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 1.7e-128 463.4 286 78.0
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 4.1e-127 458.8 356 66.0
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 8.5e-125 451.1 365 59.2
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 7.2e-124 448.0 281 75.1
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 2.3e-122 443.0 323 65.9
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 1.1e-121 440.7 279 76.0
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 2.0e-121 439.9 370 60.5
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 9.7e-121 437.6 278 76.3
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 1.8e-119 433.3 356 61.0
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 7.0e-119 431.4 280 74.6
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 2.9e-117 426.0 281 73.3
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 3.0e-114 416.0 325 64.0
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 3.9e-114 415.6 384 53.1
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 3.3e-113 412.5 366 54.9
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 2.2e-112 409.8 275 70.5
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 6.5e-109 398.3 238 77.7
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 8.5e-109 397.9 273 70.7
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 2.7e-107 392.9 369 52.6
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 2.3e-106 389.8 400 49.5
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 2.0e-105 386.7 287 63.8
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 4.8e-104 382.1 273 68.9
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 8.0e-83 311.6 241 63.9
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 1.4e-82 310.8 198 75.8
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 2.3e-82 310.1 179 81.6
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 3.4e-81 306.2 197 72.1
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 3.1e-74 283.1 198 69.7
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 3.6e-59 233.0 171 69.6
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 6.4e-56 222.2 263 51.0
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 1.3e-43 181.4 400 28.8
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 3.4e-41 173.3 364 31.0
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 2.4e-39 167.2 113 73.5
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 9.3e-39 165.2 430 28.8
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 2.7e-38 163.7 118 64.4
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 6.0e-38 162.5 146 58.2
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 2.3e-37 160.6 118 63.6
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 3.1e-34 150.2 115 62.6
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 6.5e-32 142.5 306 31.4
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 2.6e-25 120.6 84 70.2
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 2.6e-09 67.4 49 67.3


User provided reference genes

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