Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 1.8e-142 509.2 260 100.0
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 7.0e-142 507.3 260 99.2
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 6.2e-106 387.9 254 75.6
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 1.6e-101 373.2 229 80.3
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 1.6e-101 373.2 229 79.5
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 2.1e-101 372.9 252 77.0
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.3e-100 370.2 237 76.8
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 1.7e-100 369.8 241 77.2
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 3.0e-100 369.0 229 79.5
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 3.9e-100 368.6 229 79.0
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 5.1e-100 368.2 241 77.2
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 6.6e-100 367.9 237 76.4
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 1.5e-99 366.7 258 70.5
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 5.6e-99 364.8 248 71.0
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 9.6e-99 364.0 241 75.9
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 9.6e-99 364.0 241 75.9
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 9.6e-99 364.0 229 77.3
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 9.6e-99 364.0 229 77.3
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 1.3e-98 363.6 228 78.9
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 3.6e-98 362.1 241 73.9
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 4.8e-98 361.7 241 74.3
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 6.2e-98 361.3 229 77.7
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 3.1e-97 359.0 241 73.0
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 3.1e-97 359.0 241 75.1
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 3.1e-97 359.0 229 77.3
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 4.0e-97 358.6 229 76.4
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 6.9e-97 357.8 229 74.7
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 9.0e-97 357.5 241 74.7
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 9.0e-97 357.5 229 75.5
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 9.0e-97 357.5 229 76.4
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 2.6e-96 355.9 228 75.9
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 2.6e-96 355.9 229 76.0
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 3.4e-96 355.5 229 74.2
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 7.6e-96 354.4 224 77.2
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 9.9e-96 354.0 221 79.2
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 9.9e-96 354.0 258 70.5
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 1.3e-95 353.6 229 76.4
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 1.7e-95 353.2 228 74.6
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 1.7e-95 353.2 228 75.0
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 2.2e-95 352.8 229 74.7
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.2e-95 352.8 228 74.1
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 4.9e-95 351.7 226 76.5
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 4.9e-95 351.7 229 74.7
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 1.4e-94 350.1 229 74.2
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 1.9e-94 349.7 241 71.4
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 2.4e-94 349.4 229 74.2
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 3.2e-94 349.0 229 74.2
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 3.2e-94 349.0 229 74.2
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 7.1e-94 347.8 229 73.8
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 9.3e-94 347.4 229 74.2
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 9.3e-94 347.4 229 74.2
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 9.3e-94 347.4 229 74.7
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 1.2e-93 347.1 236 74.2
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 1.6e-93 346.7 229 73.4
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.6e-93 346.7 229 75.1
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 2.1e-93 346.3 229 73.4
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 2.1e-93 346.3 223 77.1
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 2.7e-93 345.9 229 74.2
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 2.7e-93 345.9 241 72.6
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 6.0e-93 344.7 229 72.5
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 1.3e-92 343.6 229 72.9
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 1.3e-92 343.6 229 73.8
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 3.0e-92 342.4 228 72.8
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 3.0e-92 342.4 234 73.1
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 3.9e-92 342.0 229 72.1
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 3.9e-92 342.0 229 72.1
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 5.1e-92 341.7 229 72.1
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 5.1e-92 341.7 223 74.4
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 6.7e-92 341.3 230 73.5
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 6.7e-92 341.3 259 66.4
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.9e-91 339.7 229 72.9
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.9e-91 339.7 229 72.9
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 9.6e-91 337.4 229 72.5
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 9.6e-91 337.4 234 71.4
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 1.6e-90 336.7 225 73.8
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 8.4e-87 324.3 237 69.6
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.9e-86 323.2 226 69.9
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 7.9e-85 317.8 234 69.2
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 1.8e-84 316.6 229 70.3
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 6.7e-84 314.7 249 64.7
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 1.1e-83 313.9 236 65.7
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 2.5e-83 312.8 236 64.8
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.3e-83 312.4 236 65.3
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 5.6e-83 311.6 205 75.1
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 4.8e-82 308.5 271 60.9
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 6.9e-81 304.7 199 76.4
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 7.6e-80 301.2 258 60.1
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 4.9e-79 298.5 235 65.1
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.5e-78 296.2 267 57.7
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 2.5e-78 296.2 191 78.5
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 2.5e-78 296.2 234 64.1
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 2.1e-77 293.1 226 64.2
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 2.7e-77 292.7 246 57.3
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.3e-76 290.4 271 59.8
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 1.3e-74 283.9 194 72.7
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 8.2e-74 281.2 193 74.6
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.4e-70 270.4 221 63.3
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 2.5e-70 269.6 229 62.4
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 1.3e-68 263.8 220 59.1
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 2.3e-68 263.1 200 66.0
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 5.7e-67 258.5 196 70.9
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.8e-65 253.4 295 49.8
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 3.8e-63 245.7 241 50.2
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 6.5e-63 245.0 149 75.8
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 1.5e-59 233.8 161 71.4
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 6.9e-57 224.9 221 51.1
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.5e-56 223.8 195 63.6
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 7.7e-56 221.5 217 54.4
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 8.8e-52 208.0 173 61.3
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 8.8e-52 208.0 173 61.3
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 6.3e-50 201.8 140 68.6
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 3.3e-43 179.5 122 74.6
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 1.1e-41 174.5 123 72.4
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 9.8e-35 151.4 121 65.3
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 2.9e-31 139.8 163 49.1
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.5e-30 137.5 93 76.3
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 3.5e-24 116.3 103 57.3
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 6.6e-23 112.1 61 82.0
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 1.9e-22 110.5 71 71.8
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 5.6e-22 109.0 73 69.9
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 3.4e-19 99.8 55 81.8
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 4.6e-16 89.4 65 73.8
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 1.0e-15 88.2 96 56.2
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 2.0e-11 73.9 244 26.2
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 4.6e-08 62.8 65 49.2


User provided reference genes

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