Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G4054 Papaver somniferum HOM05D006220 ORTHO05D007590 4.4e-144 515.8 583 100.0
PSO832G1845 Papaver somniferum HOM05D006220 ORTHO05D007590 2.1e-125 453.8 583 95.2
Aqoxy4G01032 Aquilegia oxysepala HOM05D006220 ORTHO05D007590 7.9e-93 345.5 583 81.1
Cfa020552 Carpinus fangiana HOM05D006220 ORTHO05D007590 3.3e-91 340.1 584 71.6
HanXRQChr03g0078511 Helianthus annuus HOM05D006220 ORTHO05D007590 3.7e-90 336.7 581 67.8
TWI38G2391 Tripterygium wilfordii HOM05D006220 ORTHO05D007590 4.8e-90 336.3 583 74.3
COL.COLO4_09426 Corchorus olitorius HOM05D006220 ORTHO05D007590 5.3e-89 332.8 582 74.9
GSVIVG01014371001 Vitis vinifera HOM05D006220 ORTHO05D007590 6.9e-89 332.4 583 73.8
Prupe.4G184800 Prunus persica HOM05D006220 ORTHO05D007590 6.5e-87 325.9 583 66.9
RcHm_v2.0_Chr5g0034391 Rosa chinensis HOM05D006220 ORTHO05D007590 1.9e-86 324.3 584 72.6
Thecc.07G079000 Theobroma cacao HOM05D006220 ORTHO05D007590 1.9e-86 324.3 583 72.4
Zm00001eb259320 Zea mays HOM05D006220 ORTHO05D007590 2.7e-85 320.5 582 72.0
Hma1.2p1_0148F.1_g066160 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 6.1e-85 319.3 582 72.0
Hund22942 Selenicereus undatus HOM05D006220 ORTHO05D007590 1.0e-84 318.5 581 70.9
HPP92_022050 Vanilla planifolia HOM05D006220 ORTHO05D007590 1.0e-84 318.5 586 67.7
Os02g0826600 Oryza sativa ssp. japonica HOM05D006220 ORTHO05D007590 1.1e-83 315.1 584 67.6
Sp3g13670 Schrenkiella parvula HOM05D006220 ORTHO05D007590 1.1e-83 315.1 585 67.5
CANSAT56G4311 Cannabis sativa HOM05D006220 ORTHO05D007590 5.7e-83 312.8 583 74.8
CSS0010017 Camellia sinensis var. sinensis HOM05D006220 ORTHO05D007590 7.4e-83 312.4 583 71.0
Gohir.A13G145200 Gossypium hirsutum HOM05D006220 ORTHO05D007590 3.7e-82 310.1 583 68.8
ATR0680G100 Amborella trichopoda HOM05D006220 ORTHO05D007590 4.8e-82 309.7 584 81.2
Atru.chr2.2718 Acer truncatum HOM05D006220 ORTHO05D007590 8.2e-82 308.9 582 77.3
Cc05_g12250 Coffea canephora HOM05D006220 ORTHO05D007590 1.8e-81 307.8 583 73.8
FAN25G1684 Fragaria x ananassa HOM05D006220 ORTHO05D007590 6.9e-81 305.8 585 77.6
TAR626G0245 Trochodendron aralioides HOM05D006220 ORTHO05D007590 1.2e-80 305.1 564 77.3
Lalb_Chr20g0109761 Lupinus albus HOM05D006220 ORTHO05D007590 2.0e-80 304.3 583 72.7
arahy.Tifrunner.gnm1.ann1.BQ9KJC Arachis hypogaea HOM05D006220 ORTHO05D007590 1.3e-79 301.6 589 71.0
PGR031G1387 Punica granatum HOM05D006220 ORTHO05D007590 1.3e-79 301.6 582 69.8
arahy.Tifrunner.gnm1.ann1.LU5I8Y Arachis hypogaea HOM05D006220 ORTHO05D007590 2.2e-79 300.8 589 68.6
Glyma.13G278800 Glycine max HOM05D006220 ORTHO05D007590 1.4e-78 298.1 582 75.3
CAN.G1110.52 Capsicum annuum HOM05D006220 ORTHO05D007590 1.9e-78 297.7 583 71.9
FvH4_3g20490 Fragaria vesca HOM05D006220 ORTHO05D007590 1.2e-77 295.0 585 77.8
Gohir.D13G150000 Gossypium hirsutum HOM05D006220 ORTHO05D007590 1.2e-77 295.0 583 69.0
Gorai.013G167800 Gossypium raimondii HOM05D006220 ORTHO05D007590 2.7e-77 293.9 583 68.6
CDE05G0932 Ceratophyllum demersum HOM05D006220 ORTHO05D007590 3.6e-77 293.5 585 73.0
FAN16G3027 Fragaria x ananassa HOM05D006220 ORTHO05D007590 6.1e-77 292.7 585 77.8
Manes.03G112900 Manihot esculenta HOM05D006220 ORTHO05D007590 6.1e-77 292.7 583 69.5
THA.LOC104810484 Tarenaya hassleriana HOM05D006220 ORTHO05D007590 6.1e-77 292.7 582 70.1
Actinidia05212 Actinidia chinensis HOM05D006220 ORTHO05D007590 1.0e-76 292.0 583 74.6
Solyc10g006930.4 Solanum lycopersicum HOM05D006220 ORTHO05D007590 2.3e-76 290.8 583 71.2
TPR.G38952 Trifolium pratense HOM05D006220 ORTHO05D007590 5.2e-76 289.7 596 69.3
Lj3g0017554 Lotus japonicus HOM05D006220 ORTHO05D007590 6.7e-76 289.3 582 73.2
Sopen10g002840 Solanum pennellii HOM05D006220 ORTHO05D007590 1.1e-75 288.5 583 71.4
AT3G15410 Arabidopsis thaliana HOM05D006220 ORTHO05D007590 1.5e-75 288.1 583 65.2
FAN11G1997 Fragaria x ananassa HOM05D006220 ORTHO05D007590 5.7e-75 286.2 599 71.3
Potri.011G121700 Populus trichocarpa HOM05D006220 ORTHO05D007590 9.7e-75 285.4 583 77.5
Carub.0003s1514 Capsella rubella HOM05D006220 ORTHO05D007590 1.7e-74 284.6 583 66.6
ECA240G2314 Erigeron canadensis HOM05D006220 ORTHO05D007590 1.7e-74 284.6 582 64.6
AL3G27960 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 2.2e-74 284.3 583 65.7
AUR62029364 Chenopodium quinoa HOM05D006220 ORTHO05D007590 2.2e-74 284.3 583 53.0
AUR62034280 Chenopodium quinoa HOM05D006220 ORTHO05D007590 4.8e-74 283.1 574 60.3
MD11G1243700 Malus domestica HOM05D006220 ORTHO05D007590 4.8e-74 283.1 586 61.3
Psat5g245040 Pisum sativum HOM05D006220 ORTHO05D007590 6.3e-74 282.7 583 75.3
Nn1g06599 Nelumbo nucifera HOM05D006220 ORTHO05D007590 1.8e-73 281.2 628 69.9
DCAR_017149 Daucus carota HOM05D006220 ORTHO05D007590 7.0e-73 279.3 498 73.9
MELO3C016523.2 Cucumis melo HOM05D006220 ORTHO05D007590 1.2e-72 278.5 584 64.6
MBI17_g46353_MAGBIO Magnolia biondii HOM05D006220 ORTHO05D007590 4.5e-72 276.6 363 74.7
Sed0021838 Sechium edule HOM05D006220 ORTHO05D007590 4.5e-72 276.6 581 67.5
BcaB06g29573 Brassica carinata HOM05D006220 ORTHO05D007590 1.0e-71 275.4 584 65.1
CsaV3_3G006190 Cucumis sativus L. HOM05D006220 ORTHO05D007590 2.9e-71 273.9 584 64.0
Glyma.12G222700 Glycine max HOM05D006220 ORTHO05D007590 1.5e-70 271.6 583 69.8
Thhalv10020366m.g Eutrema salsugineum HOM05D006220 ORTHO05D007590 4.2e-70 270.0 585 64.3
Nitab4.5_0000207g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 7.2e-70 269.2 318 60.1
Rhsim06G0196800 Rhododendron simsii HOM05D006220 ORTHO05D007590 7.2e-70 269.2 598 72.6
Duzib213G0302 Durio zibethinus HOM05D006220 ORTHO05D007590 1.6e-69 268.1 497 71.0
CARHR090460 Cardamine hirsuta HOM05D006220 ORTHO05D007590 2.1e-69 267.7 583 65.0
Lsat_1_v5_gn_9_97140 Lactuca sativa HOM05D006220 ORTHO05D007590 8.0e-69 265.8 498 61.8
Oeu008016.1 Olea europaea HOM05D006220 ORTHO05D007590 1.4e-68 265.0 363 67.2
BraA05t22221Z Brassica rapa HOM05D006220 ORTHO05D007590 1.8e-68 264.6 590 64.1
Ciclev10007835m.g Citrus clementina HOM05D006220 ORTHO05D007590 4.0e-68 263.5 582 69.9
Migut.H01927 Erythranthe guttata HOM05D006220 ORTHO05D007590 1.2e-67 261.9 583 70.7
Eucgr.F03334 Eucalyptus grandis HOM05D006220 ORTHO05D007590 2.0e-67 261.2 580 68.3
Phvul.005G083000 Phaseolus vulgaris HOM05D006220 ORTHO05D007590 3.3e-67 260.4 587 74.3
VMungo1080G0525 Vigna mungo HOM05D006220 ORTHO05D007590 1.3e-66 258.5 562 75.8
Medtr2g079560 Medicago truncatula HOM05D006220 ORTHO05D007590 4.8e-66 256.5 589 71.6
MD00G1090000 Malus domestica HOM05D006220 ORTHO05D007590 2.4e-65 254.2 554 63.7
Dinv08311 Davidia involucrata HOM05D006220 ORTHO05D007590 4.1e-65 253.4 364 76.1
BolC5t33860H Brassica oleracea HOM05D006220 ORTHO05D007590 5.9e-64 249.6 590 62.4
Cpa.g.sc80.40 Carica papaya HOM05D006220 ORTHO05D007590 6.5e-63 246.1 591 62.1
SGA_v2.0_scaffold9G04934 Striga asiatica HOM05D006220 ORTHO05D007590 7.2e-62 242.7 598 61.7
MSTRG.14365 Avicennia marina HOM05D006220 ORTHO05D007590 1.2e-61 241.9 583 65.2
Sabra11G0107700 Salix brachista HOM05D006220 ORTHO05D007590 1.6e-61 241.5 683 62.4
EL10Ac4g08136 Beta vulgaris HOM05D006220 ORTHO05D007590 2.7e-61 240.7 562 69.2
CiPaw.11G172800 Carya illinoinensis HOM05D006220 ORTHO05D007590 3.6e-61 240.4 443 73.4
Sc16g0006920 Simmondsia chinensis HOM05D006220 ORTHO05D007590 3.0e-60 237.3 499 67.3
A05p33990 Brassica napus HOM05D006220 ORTHO05D007590 7.5e-59 232.6 563 62.5
Aa31LG8G2650 Aethionema arabicum HOM05D006220 ORTHO05D007590 7.0e-57 226.1 642 55.5
BcaC05g29008 Brassica carinata HOM05D006220 ORTHO05D007590 4.5e-56 223.4 562 62.6
ClCG10G006830 Citrullus lanatus HOM05D006220 ORTHO05D007590 1.6e-53 214.9 524 61.6
vmacro11856 Vaccinium macrocarpon HOM05D006220 ORTHO05D007590 5.2e-52 209.9 574 63.4
Nitab4.5_0001320g0170 Nicotiana tabacum HOM05D006220 ORTHO05D007590 2.0e-51 208.0 313 57.2
Hma1.2p1_0148F.1_g066170 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 4.4e-51 206.8 280 62.1
unitig_26.g9535 Utricularia gibba HOM05D006220 ORTHO05D007590 7.8e-48 196.1 557 36.4
Mapoly0029s0091 Marchantia polymorpha HOM05D006220 ORTHO05D007590 1.3e-47 195.3 588 62.1
Haze_09468 Corylus avellana HOM05D006220 ORTHO05D007590 4.3e-46 190.3 223 61.9
Pp3c6_15930 Physcomitrium patens HOM05D006220 ORTHO05D007590 4.7e-45 186.8 594 57.2
Peaxi162Scf00027g02813 Petunia axillaris HOM05D006220 ORTHO05D007590 2.3e-44 184.5 561 64.3
SalBow7G3592 Salvia bowleyana HOM05D006220 ORTHO05D007590 3.4e-43 180.6 558 53.0
AagrBONN_evm.TU.Sc2ySwM_362.1464 Anthoceros agrestis HOM05D006220 ORTHO05D007590 2.4e-41 174.5 595 52.9
SMO200G0168 Selaginella moellendorffii HOM05D006220 ORTHO05D007590 5.0e-39 166.8 585 62.7
C05p51740 Brassica napus HOM05D006220 ORTHO05D007590 2.1e-37 161.4 518 62.4
Lj1A847G19 Lonicera japonica HOM05D006220 ORTHO05D007590 1.7e-34 151.8 544 63.4
MD11G1243500 Malus domestica HOM05D006220 ORTHO05D007590 1.6e-32 145.2 198 63.1
arahy.Tifrunner.gnm1.ann1.XCJ8AH Arachis hypogaea HOM05D006220 ORTHO05D007590 1.1e-30 139.0 142 54.9
FAN11G3846 Fragaria x ananassa HOM05D000189 ORTHO05D007610 2.3e-28 131.3 107 59.8
Sabra11G0105900 Salix brachista HOM05D006220 ORTHO05D007590 1.6e-21 108.6 76 65.8
Sabra11G0106700 Salix brachista HOM05D006220 ORTHO05D007590 1.6e-21 108.6 75 66.7
Sabra11G0107000 Salix brachista HOM05D006220 ORTHO05D007590 1.6e-21 108.6 75 66.7
HPP92_027622 Vanilla planifolia HOM05D006220 ORTHO05D007590 3.6e-21 107.5 75 66.7
CBR_g29878 Chara braunii HOM05D006220 ORTHO05D007590 1.1e-20 105.9 165 38.2
Sabra11G0105600 Salix brachista HOM05D006220 ORTHO05D007590 1.1e-20 105.9 75 65.3
Gohir.1Z049312 Gossypium hirsutum HOM05D006220 ORTHO05D007590 1.4e-20 105.5 92 60.9
Nitab4.5_0001320g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 1.2e-19 102.4 99 53.5
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 5.8e-19 100.1 120 48.3
Lsat_1_v5_gn_9_85500 Lactuca sativa HOM05D006220 ORTHO05D007590 7.1e-17 93.2 68 63.2
HanXRQChr09g0260971 Helianthus annuus HOM05D006220 ORTHO05D007590 1.5e-14 85.5 60 60.0
Haze_09464 Corylus avellana HOM05D006220 ORTHO05D007590 1.5e-11 75.5 54 61.1
Atru.chr2.2722 Acer truncatum HOM05D006220 ORTHO05D017154 2.9e-10 71.2 41 82.9
CBR_g29877 Chara braunii HOM05D005358 ORTHO05D006384 2.9e-10 71.2 76 40.8
Cc05_g12270 Coffea canephora HOM05D006220 ORTHO05D007590 8.4e-10 69.7 104 75.0
Cc05_g12290 Coffea canephora HOM05D006220 ORTHO05D007590 8.4e-10 69.7 104 75.0
Cc05_g12300 Coffea canephora HOM05D006220 ORTHO05D007590 8.4e-10 69.7 104 75.0
Cre01.g054100 Chlamydomonas reinhardtii HOM05D006220 ORTHO05D007590 1.4e-09 68.9 231 55.4
Thecc.07G078400 Theobroma cacao HOM05D006220 ORTHO05D007590 3.2e-09 67.8 41 80.5
MCO03G083 Micromonas commoda HOM05D006220 ORTHO05D007590 1.2e-08 65.9 295 30.5
Sc13g0008670 Simmondsia chinensis HOM05D006220 ORTHO05D007590 2.1e-08 65.1 98 67.3
AL230U10010 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 1.9e-06 58.5 40 75.0
Duzib268G0075 Durio zibethinus HOM05D000101 ORTHO05D000089 2.5e-06 58.2 123 31.7
PSO017G1403 Papaver somniferum HOM05D006395 ORTHO05D007894 9.6e-06 56.2 87 37.9


User provided reference genes

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