Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2862 Papaver somniferum HOM05D004913 ORTHO05D006150 2.0e-194 682.6 399 100.0
PSO238G0009 Papaver somniferum HOM05D004913 ORTHO05D006150 5.6e-181 637.9 403 93.5
GSVIVG01018096001 Vitis vinifera HOM05D004913 ORTHO05D006150 7.6e-53 212.2 307 47.2
TAR636G2191 Trochodendron aralioides HOM05D004913 ORTHO05D006150 2.9e-52 210.3 308 47.7
THA.LOC104826068 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 6.4e-52 209.1 235 56.6
Nn1g02556 Nelumbo nucifera HOM05D004913 ORTHO05D006150 8.4e-52 208.8 302 46.7
Eucgr.H03172 Eucalyptus grandis HOM05D004913 ORTHO05D006150 1.9e-51 207.6 200 61.0
MBI11_g38514_MAGBIO Magnolia biondii HOM05D004913 ORTHO05D006150 7.1e-51 205.7 319 46.4
Duzib151G0562 Durio zibethinus HOM05D004913 ORTHO05D006150 9.3e-51 205.3 236 55.1
Manes.15G035800 Manihot esculenta HOM05D004913 ORTHO05D006150 9.3e-51 205.3 286 48.3
THA.LOC104815979 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 1.6e-50 204.5 235 54.5
Oeu032612.1 Olea europaea HOM05D004913 ORTHO05D006150 2.1e-50 204.1 235 54.5
Thecc.04G244000 Theobroma cacao HOM05D004913 ORTHO05D006150 2.1e-50 204.1 307 46.3
Gohir.D10G152000 Gossypium hirsutum HOM05D004913 ORTHO05D006150 2.7e-50 203.8 307 45.6
Potri.010G078500 Populus trichocarpa HOM05D004913 ORTHO05D006150 3.5e-50 203.4 236 52.5
QL06p015098 Quercus lobata HOM05D004913 ORTHO05D006150 4.6e-50 203.0 294 46.9
Duzib052G0554 Durio zibethinus HOM05D004913 ORTHO05D006150 6.0e-50 202.6 309 45.6
Gorai.011G170500 Gossypium raimondii HOM05D004913 ORTHO05D006150 1.7e-49 201.1 309 45.0
Potri.008G160800 Populus trichocarpa HOM05D004913 ORTHO05D006150 3.0e-49 200.3 236 53.8
Gohir.A10G114500 Gossypium hirsutum HOM05D004913 ORTHO05D006150 5.1e-49 199.5 309 45.0
Sabra08G0122700 Salix brachista HOM05D004913 ORTHO05D006150 5.1e-49 199.5 236 53.0
Cpa.g.sc58.23 Carica papaya HOM05D004913 ORTHO05D006150 1.1e-48 198.4 303 45.2
DCAR_030710 Daucus carota HOM05D004913 ORTHO05D006150 1.5e-48 198.0 235 54.9
PGR004G2231 Punica granatum HOM05D004913 ORTHO05D006150 1.5e-48 198.0 302 46.4
Dinv44614 Davidia involucrata HOM05D004913 ORTHO05D006150 1.9e-48 197.6 235 54.0
Sed0018032 Sechium edule HOM05D004913 ORTHO05D003182 1.9e-48 197.6 235 51.5
Sed0027984 Sechium edule HOM05D004913 ORTHO05D006150 1.9e-48 197.6 206 54.4
MD13G1204100 Malus domestica HOM05D004913 ORTHO05D006150 2.5e-48 197.2 199 58.8
SGA_v2.0_scaffold101G29779 Striga asiatica HOM05D004913 ORTHO05D006150 2.5e-48 197.2 235 54.5
CSS0025455 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D006150 7.3e-48 195.7 314 44.3
RcHm_v2.0_Chr5g0043971 Rosa chinensis HOM05D004913 ORTHO05D006150 7.3e-48 195.7 235 52.3
arahy.Tifrunner.gnm1.ann1.9S1KBE Arachis hypogaea HOM05D004913 ORTHO05D006150 1.3e-47 194.9 286 43.4
vmacro15402 Vaccinium macrocarpon HOM05D004913 ORTHO05D006150 1.3e-47 194.9 314 45.2
CiPaw.02G117800 Carya illinoinensis HOM05D004913 ORTHO05D006150 1.6e-47 194.5 283 47.3
FvH4_3g24470 Fragaria vesca HOM05D004913 ORTHO05D006150 3.6e-47 193.4 234 52.1
CSS0009777 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D003182 4.8e-47 193.0 315 44.4
Ciclev10005381m.g Citrus clementina HOM05D004913 ORTHO05D006150 8.1e-47 192.2 227 53.3
MD16G1206200 Malus domestica HOM05D004913 ORTHO05D006150 8.1e-47 192.2 235 51.9
arahy.Tifrunner.gnm1.ann1.8JLR9N Arachis hypogaea HOM05D004913 ORTHO05D006150 1.1e-46 191.8 311 41.8
Manes.03G170000 Manihot esculenta HOM05D004913 ORTHO05D006150 1.1e-46 191.8 235 53.6
TWI09G0491 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 4.0e-46 189.9 269 46.8
Prupe.1G027200 Prunus persica HOM05D004913 ORTHO05D006150 5.3e-46 189.5 237 50.2
CsaV3_3G012680 Cucumis sativus L. HOM05D004913 ORTHO05D006150 9.0e-46 188.7 310 43.2
Gorai.006G070100 Gossypium raimondii HOM05D004913 ORTHO05D006150 2.0e-45 187.6 248 49.6
MSTRG.21888 Avicennia marina HOM05D004913 ORTHO05D006150 3.4e-45 186.8 280 44.6
Lalb_Chr06g0168981 Lupinus albus HOM05D004913 ORTHO05D006150 3.4e-45 186.8 283 45.2
CANSAT78G1520 Cannabis sativa HOM05D004913 ORTHO05D006150 5.8e-45 186.0 222 51.8
AL1G13830 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 7.6e-45 185.7 270 47.4
AL37U10050 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 1.3e-44 184.9 231 49.8
Carub.0001s0342 Capsella rubella HOM05D004913 ORTHO05D006150 1.3e-44 184.9 230 50.4
EL10Ac4g07493 Beta vulgaris HOM05D004913 ORTHO05D006150 1.7e-44 184.5 235 49.8
Glyma.20G210600 Glycine max HOM05D004913 ORTHO05D006150 2.2e-44 184.1 279 45.5
Carub.0008s0491 Capsella rubella HOM05D004913 ORTHO05D006150 2.9e-44 183.7 225 52.4
Gohir.A09G057300 Gossypium hirsutum HOM05D004913 ORTHO05D006150 3.8e-44 183.3 317 42.9
Phvul.003G138434 Phaseolus vulgaris HOM05D004913 ORTHO05D006150 6.4e-44 182.6 306 44.1
VMungo0720G1087 Vigna mungo HOM05D004913 ORTHO05D006150 8.4e-44 182.2 306 43.8
AT1G04230 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 1.4e-43 181.4 270 46.3
AT5G43720 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 1.4e-43 181.4 228 50.9
Glyma.10G179800 Glycine max HOM05D004913 ORTHO05D006150 1.4e-43 181.4 283 44.5
Haze_11271 Corylus avellana HOM05D004913 ORTHO05D006150 1.9e-43 181.0 235 51.9
CARHR179900 Cardamine hirsuta HOM05D004913 ORTHO05D006150 2.4e-43 180.6 220 52.7
Sp2g08510 Schrenkiella parvula HOM05D004913 ORTHO05D006150 2.4e-43 180.6 235 50.2
Lj5g0012164 Lotus japonicus HOM05D004913 ORTHO05D006150 3.2e-43 180.3 328 39.6
Thhalv10003245m.g Eutrema salsugineum HOM05D004913 ORTHO05D006150 4.2e-43 179.9 219 51.6
FAN11G1852 Fragaria x ananassa HOM05D004913 ORTHO05D006150 4.2e-43 179.9 234 50.4
CAN.G626.13 Capsicum annuum HOM05D004913 ORTHO05D006150 2.1e-42 177.6 209 55.0
CARHR003560 Cardamine hirsuta HOM05D004913 ORTHO05D006150 2.7e-42 177.2 236 49.6
Rhsim02G0032600 Rhododendron simsii HOM05D004913 ORTHO05D006150 2.7e-42 177.2 269 46.5
Medtr1g076290 Medicago truncatula HOM05D004913 ORTHO05D006150 3.5e-42 176.8 299 42.8
MELO3C006479.2 Cucumis melo HOM05D004913 ORTHO05D006150 4.6e-42 176.4 314 40.1
Lsat_1_v5_gn_5_67500 Lactuca sativa HOM05D004913 ORTHO05D006150 4.6e-42 176.4 235 49.8
Lalb_Chr21g0311951 Lupinus albus HOM05D004913 ORTHO05D006150 4.6e-42 176.4 281 42.7
Migut.N00232 Erythranthe guttata HOM05D004913 ORTHO05D006150 6.0e-42 176.0 285 45.3
Solyc09g083270.4 Solanum lycopersicum HOM05D004913 ORTHO05D006150 6.0e-42 176.0 205 53.7
Sopen09g032190 Solanum pennellii HOM05D004913 ORTHO05D006150 6.0e-42 176.0 205 53.7
PGSC0003DMG400006092 Solanum tuberosum HOM05D004913 ORTHO05D006150 6.0e-42 176.0 205 53.7
FAN16G1149 Fragaria x ananassa HOM05D004913 ORTHO05D006150 7.9e-42 175.6 227 51.1
BolC7t43157H Brassica oleracea HOM05D004913 ORTHO05D006150 1.0e-41 175.3 301 41.5
Aa31LG5G3520 Aethionema arabicum HOM05D004913 ORTHO05D006150 1.8e-41 174.5 203 52.7
Ca_09877_v3 Cicer arietinum L. HOM05D004913 ORTHO05D006150 1.8e-41 174.5 237 49.4
C07p26280 Brassica napus HOM05D004913 ORTHO05D006150 3.0e-41 173.7 301 41.5
BcaC06g31682 Brassica carinata HOM05D004913 ORTHO05D006150 3.9e-41 173.3 220 50.5
ATR0665G449 Amborella trichopoda HOM05D004913 ORTHO05D006150 6.7e-41 172.6 319 39.2
FAN25G2316 Fragaria x ananassa HOM05D004913 ORTHO05D006150 8.7e-41 172.2 232 49.6
FAN25G1200 Fragaria x ananassa HOM05D004913 ORTHO05D006150 1.1e-40 171.8 232 49.1
HanXRQChr12g0381181 Helianthus annuus HOM05D004913 ORTHO05D006150 1.9e-40 171.0 234 48.7
Lj3A719T118 Lonicera japonica HOM05D004913 ORTHO05D006150 2.5e-40 170.6 311 43.1
Nitab4.5_0004203g0050 Nicotiana tabacum HOM05D004913 ORTHO05D006150 3.3e-40 170.2 164 59.1
BraA06t27642Z Brassica rapa HOM05D004913 ORTHO05D006150 4.3e-40 169.9 220 49.1
AUR62040390 Chenopodium quinoa HOM05D004913 ORTHO05D006150 5.6e-40 169.5 176 54.0
Psat6g114920 Pisum sativum HOM05D004913 ORTHO05D006150 5.6e-40 169.5 299 41.5
A06p47740 Brassica napus HOM05D004913 ORTHO05D006150 7.4e-40 169.1 220 49.1
Gohir.D09G056500 Gossypium hirsutum HOM05D004913 ORTHO05D006150 7.4e-40 169.1 248 46.4
CDE07G0872 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 1.3e-39 168.3 318 39.3
Peaxi162Scf01416g00120 Petunia axillaris HOM05D004913 ORTHO05D006150 1.3e-39 168.3 203 51.2
A02p27910 Brassica napus HOM05D004913 ORTHO05D006150 1.6e-39 167.9 219 49.3
BraA02t07829Z Brassica rapa HOM05D004913 ORTHO05D006150 1.6e-39 167.9 219 49.3
AUR62041210 Chenopodium quinoa HOM05D004913 ORTHO05D006150 1.6e-39 167.9 234 48.7
BolC2t10451H Brassica oleracea HOM05D004913 ORTHO05D006150 2.8e-39 167.2 283 42.4
ECA233G3913 Erigeron canadensis HOM05D004913 ORTHO05D006150 2.8e-39 167.2 251 47.4
FAN21G0973 Fragaria x ananassa HOM05D004913 ORTHO05D006150 2.8e-39 167.2 232 48.7
Cc03_g04640 Coffea canephora HOM05D004913 ORTHO05D006150 3.7e-39 166.8 196 52.0
PSO210G5612 Papaver somniferum HOM05D004913 ORTHO05D006150 3.7e-39 166.8 302 43.0
TWI73G0814 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 6.2e-39 166.0 230 48.3
Mapoly0010s0154 Marchantia polymorpha HOM05D004913 ORTHO05D006150 1.8e-38 164.5 323 40.6
Actinidia05471 Actinidia chinensis HOM05D004913 ORTHO05D006150 3.1e-38 163.7 220 51.8
AagrBONN_evm.TU.Sc2ySwM_362.2200 Anthoceros agrestis HOM05D004913 ORTHO05D006150 3.1e-38 163.7 239 48.5
Os03g0797700 Oryza sativa ssp. japonica HOM05D004913 ORTHO05D006150 6.9e-38 162.5 158 58.9
Sc13g0004930 Simmondsia chinensis HOM05D004913 ORTHO05D006150 6.9e-38 162.5 139 61.2
PSO832G0934 Papaver somniferum HOM05D004913 ORTHO05D006150 3.4e-37 160.2 314 41.7
Migut.G00417 Erythranthe guttata HOM05D004913 ORTHO05D006150 4.5e-37 159.8 310 41.3
SalBow3G1711 Salvia bowleyana HOM05D004913 ORTHO05D006150 4.5e-37 159.8 219 47.0
BcaC03g16589 Brassica carinata HOM05D004913 ORTHO05D006150 9.9e-37 158.7 212 49.1
C02p44080 Brassica napus HOM05D004913 ORTHO05D006150 9.9e-37 158.7 212 49.1
CDE04G3353 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 4.9e-36 156.4 318 38.1
Zm00001eb212900 Zea mays HOM05D004913 ORTHO05D006150 6.4e-36 156.0 197 48.7
Nitab4.5_0000525g0090 Nicotiana tabacum HOM05D004913 ORTHO05D006150 1.1e-35 155.2 210 48.6
CDE06G2453 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 1.9e-35 154.5 255 45.1
unitig_0.g131 Utricularia gibba HOM05D004913 ORTHO05D006150 3.2e-35 153.7 203 48.8
Pp3c2_37690 Physcomitrium patens HOM05D004913 ORTHO05D006150 4.2e-35 153.3 277 40.8
Aqoxy2G03527 Aquilegia oxysepala HOM05D004913 ORTHO05D006150 9.3e-35 152.1 252 41.3
HPP92_014140 Vanilla planifolia HOM05D004913 ORTHO05D006150 1.2e-34 151.8 198 50.0
CDE07G2030 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 3.5e-34 150.2 297 38.7
Hund17874 Selenicereus undatus HOM05D004913 ORTHO05D006150 1.8e-33 147.9 225 45.3
SEGI_31281 Sequoiadendron giganteum HOM05D004913 ORTHO05D006150 1.8e-33 147.9 246 41.5
AL8G16560 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 2.4e-30 137.5 171 49.1
COL.COLO4_15768 Corchorus olitorius HOM05D000979 ORTHO05D003182 1.3e-28 131.7 206 44.7
SMO358G0388 Selaginella moellendorffii HOM05D004913 ORTHO05D006150 2.2e-28 131.0 262 38.5
BcaC06g34634 Brassica carinata HOM05D004913 ORTHO05D006150 7.7e-21 105.9 152 47.4
Ah.13g071540 Amaranthus hybridus HOM05D004913 ORTHO05D006150 1.6e-18 98.2 185 39.5
CBR_g525 Chara braunii HOM05D004913 ORTHO05D006150 1.5e-16 91.7 136 38.2
SMO347G0406 Selaginella moellendorffii HOM05D004913 ORTHO05D006150 2.0e-16 91.3 163 39.3
SHI00581 Sapria himalayana HOM05D004913 ORTHO05D006150 1.7e-15 88.2 145 44.1
ClCG05G004680 Citrullus lanatus HOM05D000979 ORTHO05D003182 6.3e-15 86.3 105 52.4
TAR365G1176 Trochodendron aralioides HOM05D004913 ORTHO05D006150 2.5e-11 74.3 164 39.0
Zm00001eb034960 Zea mays HOM05D004913 ORTHO05D006150 2.5e-11 74.3 85 48.2
Ah.13g071550 Amaranthus hybridus HOM05D004913 ORTHO05D006150 4.7e-10 70.1 102 47.1
MCO11G351 Micromonas commoda HOM05D004913 ORTHO05D006150 5.7e-08 63.2 178 32.0


User provided reference genes

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