Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 6.7e-159 563.9 275 100.0
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 1.0e-98 364.0 241 73.9
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 1.2e-91 340.5 224 72.3
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 1.6e-91 340.1 218 74.8
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 2.5e-89 332.8 241 66.4
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 1.6e-88 330.1 236 68.2
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 6.8e-87 324.7 214 73.8
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 1.5e-86 323.6 240 67.1
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 4.4e-86 322.0 226 69.0
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 1.3e-85 320.5 248 62.9
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 2.2e-85 319.7 222 69.4
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 8.3e-85 317.8 224 68.3
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 1.9e-84 316.6 216 70.4
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 7.1e-84 314.7 191 76.4
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 1.2e-83 313.9 216 69.4
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 2.7e-83 312.8 222 68.5
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 1.0e-82 310.8 231 65.8
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 1.3e-82 310.5 215 67.4
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 1.7e-82 310.1 230 63.5
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 1.7e-82 310.1 248 61.3
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 3.0e-82 309.3 235 63.0
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 3.9e-82 308.9 252 62.3
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.9e-81 306.6 250 61.2
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 3.3e-81 305.8 203 70.9
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 4.3e-81 305.4 244 63.1
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 7.3e-81 304.7 219 65.8
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 7.3e-81 304.7 247 64.0
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 2.8e-80 302.8 216 66.2
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 3.6e-80 302.4 224 64.3
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 3.6e-80 302.4 217 65.4
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 4.7e-80 302.0 238 60.1
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 4.7e-80 302.0 237 60.8
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 6.2e-80 301.6 217 65.0
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 6.2e-80 301.6 258 60.1
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 1.1e-79 300.8 244 60.7
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 1.1e-79 300.8 244 60.7
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 1.4e-79 300.4 224 62.5
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 1.4e-79 300.4 239 60.3
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 1.8e-79 300.1 247 61.1
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 2.3e-79 299.7 216 63.9
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 3.1e-79 299.3 255 59.2
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 4.0e-79 298.9 243 62.1
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 6.8e-79 298.1 232 61.6
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 8.9e-79 297.7 224 62.9
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 8.9e-79 297.7 273 54.2
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 1.2e-78 297.4 235 62.6
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 2.0e-78 296.6 244 59.0
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 4.4e-78 295.4 232 62.5
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 9.9e-78 294.3 230 63.0
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 1.7e-77 293.5 216 64.8
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 1.7e-77 293.5 218 64.2
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 1.7e-77 293.5 219 63.5
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 2.2e-77 293.1 192 69.8
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 2.9e-77 292.7 226 61.5
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 2.9e-77 292.7 240 58.3
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 3.7e-77 292.4 197 71.1
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 6.4e-77 291.6 218 62.4
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.4e-76 290.4 217 64.5
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 2.4e-76 289.7 240 62.1
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 2.7e-75 286.2 213 63.8
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 4.6e-75 285.4 214 61.2
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 1.7e-74 283.5 229 60.3
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 7.3e-73 278.1 194 65.5
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 3.6e-72 275.8 207 64.7
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 2.4e-71 273.1 205 63.9
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 8.9e-71 271.2 199 63.3
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 1.3e-69 267.3 206 65.5
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 2.9e-69 266.2 204 59.8
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 6.4e-69 265.0 186 68.8
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 9.3e-68 261.2 214 59.8
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 6.0e-67 258.5 224 62.1
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 1.1e-65 254.2 197 69.0
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 1.6e-64 250.4 213 56.8
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 3.0e-58 229.6 194 56.2
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 1.6e-56 223.8 194 54.1
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 1.1e-55 221.1 196 52.6
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 7.6e-54 214.9 159 62.3
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 2.9e-53 213.0 229 51.1
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 7.1e-52 208.4 248 46.0
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 1.2e-51 207.6 199 50.3
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 2.5e-49 199.9 125 72.0
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 1.8e-47 193.7 170 59.4
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 9.3e-44 181.4 135 65.2
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 9.6e-41 171.4 105 67.6
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 1.3e-40 171.0 201 44.3
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 2.7e-35 153.3 123 63.4
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 1.9e-33 147.1 172 46.5
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 2.5e-33 146.7 106 68.9
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.9e-29 133.3 133 54.1
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.5e-28 130.2 80 72.5
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 1.4e-26 124.4 138 54.3
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 5.1e-26 122.5 100 62.0
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 5.1e-26 122.5 199 38.7
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 4.5e-14 82.8 76 55.3
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 4.2e-12 76.3 105 41.0
PRCOL_00002242 Prasinoderma coloniale HOM05D060700 ORTHO05D009694 3.5e-06 56.6 159 32.1


User provided reference genes

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