Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2046 Papaver somniferum HOM05D006300 ORTHO05D007623 1.5e-193 679.5 369 100.0
PSO210G0359 Papaver somniferum HOM05D006300 ORTHO05D007623 3.6e-184 648.3 369 96.2
TAR383G0464 Trochodendron aralioides HOM05D006300 ORTHO05D007623 6.1e-75 285.4 342 56.4
Nn6g35476 Nelumbo nucifera HOM05D006300 ORTHO05D007623 1.4e-74 284.3 369 53.7
TAR624G0799 Trochodendron aralioides HOM05D006300 ORTHO05D007623 2.4e-71 273.5 352 55.7
Nn8g38867 Nelumbo nucifera HOM05D006300 ORTHO05D007623 7.8e-70 268.5 375 50.9
MBI04_g34125_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 1.7e-69 267.3 333 52.6
TAR636G0696 Trochodendron aralioides HOM05D006300 ORTHO05D007623 4.3e-68 262.7 360 51.4
Aqoxy7G01215 Aquilegia oxysepala HOM05D006300 ORTHO05D007623 6.2e-67 258.8 294 57.1
Dinv30382 Davidia involucrata HOM05D006300 ORTHO05D007623 1.8e-66 257.3 370 50.8
GSVIVG01016850001 Vitis vinifera HOM05D006300 ORTHO05D007623 1.9e-63 247.3 173 75.1
CANSAT56G1450 Cannabis sativa HOM05D006300 ORTHO05D007623 3.5e-62 243.0 245 60.8
Thecc.06G111200 Theobroma cacao HOM05D006300 ORTHO05D007623 7.8e-62 241.9 177 71.2
Duzib160G0060 Durio zibethinus HOM05D006300 ORTHO05D007623 1.3e-61 241.1 179 69.3
Duzib192G0510 Durio zibethinus HOM05D006300 ORTHO05D007623 1.3e-61 241.1 177 70.6
Dinv37916 Davidia involucrata HOM05D006300 ORTHO05D007623 2.3e-61 240.4 351 48.4
MBI01_g01269_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 6.6e-61 238.8 333 53.2
Solyc03g121560.3 Solanum lycopersicum HOM05D006300 ORTHO05D007623 1.1e-60 238.0 180 71.1
CAN.G1389.16 Capsicum annuum HOM05D006300 ORTHO05D007623 1.5e-60 237.7 180 69.4
Sopen03g040370 Solanum pennellii HOM05D006300 ORTHO05D007623 1.5e-60 237.7 180 70.6
Gohir.A02G115200 Gossypium hirsutum HOM05D006300 ORTHO05D007623 1.9e-60 237.3 179 69.8
Gohir.D03G056300 Gossypium hirsutum HOM05D006300 ORTHO05D007623 3.3e-60 236.5 168 73.2
Gorai.003G059300 Gossypium raimondii HOM05D006300 ORTHO05D007623 3.3e-60 236.5 168 73.2
Rhsim08G0233100 Rhododendron simsii HOM05D006300 ORTHO05D007623 3.3e-60 236.5 176 71.6
HanXRQChr09g0276431 Helianthus annuus HOM05D006300 ORTHO05D007623 4.3e-60 236.1 176 70.5
Actinidia21757 Actinidia chinensis HOM05D006300 ORTHO05D007623 5.6e-60 235.7 179 68.7
COL.COLO4_30656 Corchorus olitorius HOM05D006300 ORTHO05D007623 7.3e-60 235.3 177 69.5
PGR102G2043 Punica granatum HOM05D006300 ORTHO05D007623 4.7e-59 232.6 179 68.2
vmacro18787 Vaccinium macrocarpon HOM05D006300 ORTHO05D007623 1.1e-58 231.5 325 51.4
Manes.04G139300 Manihot esculenta HOM05D006300 ORTHO05D007623 1.8e-58 230.7 167 73.1
Manes.11G026800 Manihot esculenta HOM05D006300 ORTHO05D007623 1.8e-58 230.7 178 68.5
Prupe.3G050100 Prunus persica HOM05D006300 ORTHO05D007623 8.9e-58 228.4 170 70.0
Potri.003G038600 Populus trichocarpa HOM05D006300 ORTHO05D007623 1.2e-57 228.0 179 67.0
Gohir.D10G061000 Gossypium hirsutum HOM05D006300 ORTHO05D007623 2.0e-57 227.3 178 69.1
AT1G17665 Arabidopsis thaliana HOM05D006300 ORTHO05D007623 2.6e-57 226.9 167 69.5
QL05p012743 Quercus lobata HOM05D006300 ORTHO05D007623 2.6e-57 226.9 371 47.4
MD17G1174400 Malus domestica HOM05D006300 ORTHO05D007623 3.4e-57 226.5 177 66.7
Duzib235G0903 Durio zibethinus HOM05D006300 ORTHO05D007623 4.4e-57 226.1 177 66.7
Migut.I01022 Erythranthe guttata HOM05D006300 ORTHO05D007623 5.8e-57 225.7 170 71.8
Gohir.A10G059500 Gossypium hirsutum HOM05D006300 ORTHO05D007623 1.3e-56 224.6 178 68.5
Cc04_g01980 Coffea canephora HOM05D006300 ORTHO05D007623 2.9e-56 223.4 167 68.3
CARHR018270 Cardamine hirsuta HOM05D006300 ORTHO05D007623 3.7e-56 223.0 167 69.5
CsaV3_7G034830 Cucumis sativus L. HOM05D006300 ORTHO05D007623 4.9e-56 222.6 233 60.1
AL1G29990 Arabidopsis lyrata HOM05D006300 ORTHO05D007623 6.4e-56 222.2 167 67.1
THA.LOC104812213 Tarenaya hassleriana HOM05D006300 ORTHO05D007623 6.4e-56 222.2 173 67.6
Carub.0001s1740 Capsella rubella HOM05D006300 ORTHO05D007623 8.3e-56 221.9 167 68.3
Lsat_1_v5_gn_4_95241 Lactuca sativa HOM05D006300 ORTHO05D007623 1.9e-55 220.7 336 44.3
BcaC05g25688 Brassica carinata HOM05D006300 ORTHO05D007623 2.4e-55 220.3 168 68.5
C05p16080 Brassica napus HOM05D006300 ORTHO05D007623 2.4e-55 220.3 168 68.5
BolC5t30308H Brassica oleracea HOM05D006300 ORTHO05D007623 2.4e-55 220.3 168 68.5
BcaB07g34023 Brassica carinata HOM05D006300 ORTHO05D007623 3.2e-55 219.9 168 68.5
CiPaw.02G140400 Carya illinoinensis HOM05D006300 ORTHO05D007623 3.2e-55 219.9 172 66.9
CDE04G2687 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 3.2e-55 219.9 280 55.4
SalBow6G0902 Salvia bowleyana HOM05D006300 ORTHO05D007623 3.2e-55 219.9 170 68.8
CiPaw.01G225300 Carya illinoinensis HOM05D006300 ORTHO05D007623 7.1e-55 218.8 353 44.2
Thhalv10008108m.g Eutrema salsugineum HOM05D006300 ORTHO05D007623 7.1e-55 218.8 185 62.7
Ah.15g094170 Amaranthus hybridus HOM05D006300 ORTHO05D007623 1.2e-54 218.0 348 45.1
ECA232G1041 Erigeron canadensis HOM05D000140 ORTHO05D000087 1.2e-54 218.0 168 69.0
arahy.Tifrunner.gnm1.ann1.F4I7X2 Arachis hypogaea HOM05D006300 ORTHO05D007623 2.7e-54 216.9 164 70.7
CDE06G2767 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 2.7e-54 216.9 348 48.0
PGR102G2710 Punica granatum HOM05D006300 ORTHO05D007623 2.7e-54 216.9 179 64.2
Sp1g15770 Schrenkiella parvula HOM05D006300 ORTHO05D007623 4.6e-54 216.1 166 66.3
DCAR_007620 Daucus carota HOM05D006300 ORTHO05D007623 6.0e-54 215.7 228 56.6
arahy.Tifrunner.gnm1.ann1.X9C73S Arachis hypogaea HOM05D006300 ORTHO05D007623 7.8e-54 215.3 164 70.7
MSTRG.10986 Avicennia marina HOM05D006300 ORTHO05D007623 3.0e-53 213.4 175 66.3
BraA06t24508Z Brassica rapa HOM05D006300 ORTHO05D007623 3.0e-53 213.4 168 67.9
Medtr2g100100 Medicago truncatula HOM05D006300 ORTHO05D007623 3.0e-53 213.4 173 65.9
RcHm_v2.0_Chr2g0142971 Rosa chinensis HOM05D006300 ORTHO05D007623 5.1e-53 212.6 179 64.8
A06p13560 Brassica napus HOM05D006300 ORTHO05D007623 6.6e-53 212.2 167 67.7
AUR62038132 Chenopodium quinoa HOM05D000073 ORTHO05D000033 8.6e-53 211.8 157 72.6
MELO3C024394.2 Cucumis melo HOM05D006300 ORTHO05D007623 1.1e-52 211.5 359 45.1
Glyma.13G350600 Glycine max HOM05D006300 ORTHO05D007623 1.9e-52 210.7 170 67.1
Glyma.15G023900 Glycine max HOM05D006300 ORTHO05D007623 1.9e-52 210.7 170 67.1
Aa31LG7G2500 Aethionema arabicum HOM05D006300 ORTHO05D007623 2.5e-52 210.3 163 66.3
Phvul.005G159900 Phaseolus vulgaris HOM05D006300 ORTHO05D007623 2.5e-52 210.3 172 66.9
TPR.G6530 Trifolium pratense HOM05D006300 ORTHO05D007623 5.6e-52 209.1 161 69.6
Hund20857 Selenicereus undatus HOM05D006300 ORTHO05D007623 1.6e-51 207.6 214 56.1
Lj3g0013508 Lotus japonicus HOM05D006300 ORTHO05D007623 2.1e-51 207.2 159 69.8
FvH4_6g33270 Fragaria vesca HOM05D006300 ORTHO05D007623 3.6e-51 206.5 170 65.9
FAN14G0371 Fragaria x ananassa HOM05D006300 ORTHO05D007623 3.6e-51 206.5 170 65.9
Lalb_Chr24g0396361 Lupinus albus HOM05D006300 ORTHO05D007623 3.6e-51 206.5 180 63.3
Nitab4.5_0001295g0030 Nicotiana tabacum HOM05D006300 ORTHO05D007623 3.6e-51 206.5 318 49.7
Sabra03G0025100 Salix brachista HOM05D006300 ORTHO05D007623 1.4e-50 204.5 214 55.1
VMungo1080G1020 Vigna mungo HOM05D006300 ORTHO05D007623 2.4e-50 203.8 160 69.4
Gorai.011G065200 Gossypium raimondii HOM05D006300 ORTHO05D007623 6.8e-50 202.2 344 46.5
Psat4g199680 Pisum sativum HOM05D006300 ORTHO05D007623 1.5e-49 201.1 166 66.3
FAN02G1261 Fragaria x ananassa HOM05D006300 ORTHO05D007623 2.9e-48 196.8 233 53.2
FAN05G1138 Fragaria x ananassa HOM05D006300 ORTHO05D007623 6.4e-48 195.7 158 66.5
Mapoly0001s0383 Marchantia polymorpha HOM05D006300 ORTHO05D007623 6.4e-48 195.7 168 62.5
Ciclev10025783m.g Citrus clementina HOM05D006300 ORTHO05D007623 3.5e-46 189.9 172 59.9
AagrBONN_evm.TU.Sc2ySwM_228.500 Anthoceros agrestis HOM05D006300 ORTHO05D007623 1.0e-45 188.3 168 60.1
Haze_15947 Corylus avellana HOM05D006300 ORTHO05D007623 2.3e-45 187.2 384 40.4
Medtr8g016260 Medicago truncatula HOM05D006300 ORTHO05D007623 3.0e-45 186.8 174 59.2
Pp3c7_7340 Physcomitrium patens HOM05D006300 ORTHO05D007623 6.6e-45 185.7 169 60.4
Peaxi162Scf00038g01529 Petunia axillaris HOM05D006300 ORTHO05D007623 2.5e-44 183.7 127 75.6
SGA_v2.0_scaffold127G34049 Striga asiatica HOM05D006300 ORTHO05D007623 3.6e-43 179.9 179 57.0
Nitab4.5_0007429g0010 Nicotiana tabacum HOM05D006300 ORTHO05D007623 6.9e-42 175.6 289 46.0
ClCG09G000650 Citrullus lanatus HOM05D006300 ORTHO05D007623 1.3e-40 171.4 186 55.4
Atru.chr1.3720 Acer truncatum HOM05D001008 ORTHO05D003146 1.7e-40 171.0 300 42.7
ATR0026G017 Amborella trichopoda HOM05D006300 ORTHO05D007623 2.9e-40 170.2 173 57.2
Ca_28052_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 1.9e-39 167.5 128 66.4
Ca_30533_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 1.9e-39 167.5 128 66.4
FAN09G0301 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.3e-37 161.4 139 64.7
Oeu039964.1 Olea europaea HOM05D006300 ORTHO05D007623 1.3e-37 161.4 125 67.2
HPP92_003967 Vanilla planifolia HOM05D006300 ORTHO05D007623 3.1e-34 150.2 126 64.3
Cpa.g.sc25.55 Carica papaya HOM05D006300 ORTHO05D007623 1.2e-33 148.3 101 73.3
PGSC0003DMG400002589 Solanum tuberosum HOM05D006300 ORTHO05D007623 2.7e-30 137.1 92 73.9
TPR.G7922 Trifolium pratense HOM05D006300 ORTHO05D007623 1.1e-28 131.7 122 60.7
Os01g0197400 Oryza sativa ssp. japonica HOM05D006300 ORTHO05D007623 1.5e-25 121.3 179 40.8
Zm00001eb337890 Zea mays HOM05D006300 ORTHO05D007623 3.8e-24 116.7 172 39.0
arahy.Tifrunner.gnm1.ann1.046NH9 Arachis hypogaea HOM05D006300 ORTHO05D007623 5.1e-21 106.3 111 54.1
CSS0024626 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 3.7e-19 100.1 64 76.6
COL.COLO4_30657 Corchorus olitorius HOM05D001008 ORTHO05D007623 9.0e-18 95.5 71 71.8
arahy.Tifrunner.gnm1.ann1.Z85M5C Arachis hypogaea HOM05D006300 ORTHO05D007623 4.5e-17 93.2 116 50.0
arahy.Tifrunner.gnm1.ann1.RJ4DBV Arachis hypogaea HOM05D006300 ORTHO05D007623 7.9e-14 82.4 133 44.4
Sc15g0000130 Simmondsia chinensis HOM05D006300 ORTHO05D007623 2.8e-11 73.9 56 69.6
MBI06_g20962_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 3.7e-11 73.6 40 85.0
Sed0006903 Sechium edule HOM05D006300 ORTHO05D007623 8.2e-11 72.4 61 57.4
MBI09_g03017_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 1.4e-10 71.6 39 84.6
MBI07_g16251_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 1.8e-10 71.2 79 50.6
CSS0019345 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 1.5e-09 68.2 227 35.2
Cpa.g.sc25.56 Carica papaya HOM05D006300 ORTHO05D007623 6.5e-08 62.8 39 79.5
arahy.Tifrunner.gnm1.ann1.IE7N3Z Arachis hypogaea HOM05D006300 ORTHO05D007623 8.5e-08 62.4 108 39.8
Lj9P518T56 Lonicera japonica HOM05D006300 ORTHO05D007623 1.4e-07 61.6 164 36.6
Oeu007005.1 Olea europaea HOM05D006300 ORTHO05D007623 4.6e-06 56.6 66 48.5


User provided reference genes

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