Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G1653 Papaver somniferum HOM05D005156 ORTHO05D006710 1.6e-178 629.4 333 100.0
PSO210G0499 Papaver somniferum HOM05D005156 ORTHO05D006710 6.8e-174 614.0 333 97.6
Aqoxy8s002 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 3.6e-143 511.9 330 81.8
TAR626G1548 Trochodendron aralioides HOM05D005156 ORTHO05D006710 4.8e-143 511.5 331 81.0
Atru.chr3.2617 Acer truncatum HOM05D005156 ORTHO05D006710 6.2e-143 511.1 332 81.0
CSS0001612 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 1.8e-142 509.6 329 79.0
CSS0030488 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 2.4e-142 509.2 329 78.7
Cfa009832 Carpinus fangiana HOM05D005156 ORTHO05D006710 6.9e-142 507.7 334 80.5
Potri.001G254000 Populus trichocarpa HOM05D005156 ORTHO05D006710 9.0e-142 507.3 331 80.7
CiPaw.13G153000 Carya illinoinensis HOM05D005156 ORTHO05D006710 3.4e-141 505.4 335 79.4
MD11G1196200 Malus domestica HOM05D005156 ORTHO05D006710 4.5e-141 505.0 331 79.2
Actinidia16358 Actinidia chinensis HOM05D005156 ORTHO05D006710 7.6e-141 504.2 333 78.4
CANSAT54G2883 Cannabis sativa HOM05D005156 ORTHO05D006710 7.6e-141 504.2 331 79.5
RcHm_v2.0_Chr5g0050911 Rosa chinensis HOM05D005156 ORTHO05D006710 7.6e-141 504.2 331 79.5
GSVIVG01037376001 Vitis vinifera HOM05D005156 ORTHO05D006710 4.9e-140 501.5 332 80.4
FAN16G2156 Fragaria x ananassa HOM05D005156 ORTHO05D006710 8.4e-140 500.7 332 77.7
Prupe.4G258300 Prunus persica HOM05D005156 ORTHO05D006710 3.2e-139 498.8 331 78.2
FvH4_3g28170 Fragaria vesca HOM05D005156 ORTHO05D006710 4.2e-139 498.4 332 77.4
Ciclev10015838m.g Citrus clementina HOM05D005156 ORTHO05D006710 2.7e-138 495.7 305 82.6
Hma1.2p1_1115F.1_g258845 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 1.0e-137 493.8 334 76.3
Eucgr.J00726 Eucalyptus grandis HOM05D005156 ORTHO05D006710 2.3e-137 492.7 331 76.7
Lj3g0017854 Lotus japonicus HOM05D005156 ORTHO05D006710 3.9e-137 491.9 335 76.7
CsaV3_1G043140 Cucumis sativus L. HOM05D005156 ORTHO05D006710 3.3e-136 488.8 339 75.2
Lalb_Chr10g0094741 Lupinus albus HOM05D005156 ORTHO05D006710 5.6e-136 488.0 337 75.7
Thecc.09G243300 Theobroma cacao HOM05D005156 ORTHO05D006710 1.8e-134 483.0 325 78.2
Cpa.g.sc84.13 Carica papaya HOM05D005156 ORTHO05D006710 6.9e-134 481.1 329 76.0
MSTRG.18451 Avicennia marina HOM05D005156 ORTHO05D006710 2.0e-133 479.6 332 75.0
TPR.G34160 Trifolium pratense HOM05D005156 ORTHO05D006710 4.5e-133 478.4 338 74.6
Oeu001490.1 Olea europaea HOM05D005156 ORTHO05D006710 7.6e-133 477.6 330 75.2
Glyma.09G002700 Glycine max HOM05D005156 ORTHO05D006710 1.3e-132 476.9 330 74.8
Sc16g0011170 Simmondsia chinensis HOM05D005156 ORTHO05D006710 2.2e-132 476.1 334 74.9
QL01p017825 Quercus lobata HOM05D005156 ORTHO05D006710 3.8e-132 475.3 335 76.4
Gorai.001G136000 Gossypium raimondii HOM05D005156 ORTHO05D006710 4.9e-132 474.9 330 75.2
Haze_23195 Corylus avellana HOM05D005156 ORTHO05D006710 8.4e-132 474.2 341 75.7
Gohir.D07G126000 Gossypium hirsutum HOM05D005156 ORTHO05D006710 1.9e-131 473.0 330 74.8
Migut.D00644 Erythranthe guttata HOM05D005156 ORTHO05D006710 7.1e-131 471.1 330 75.2
Gohir.A07G121700 Gossypium hirsutum HOM05D005156 ORTHO05D006710 7.1e-131 471.1 330 75.2
AL1G58170 Arabidopsis lyrata HOM05D005156 ORTHO05D006710 1.6e-130 469.9 331 74.6
PGR119G1881 Punica granatum HOM05D005156 ORTHO05D006710 6.0e-130 468.0 331 75.2
HPP92_001936 Vanilla planifolia HOM05D005156 ORTHO05D006710 1.0e-129 467.2 310 75.2
FAN21G2369 Fragaria x ananassa HOM05D005156 ORTHO05D006710 1.3e-129 466.8 332 73.8
ECA238G2265 Erigeron canadensis HOM05D005156 ORTHO05D006710 1.8e-129 466.5 334 70.7
Thhalv10011639m.g Eutrema salsugineum HOM05D005156 ORTHO05D006710 1.8e-129 466.5 331 74.0
FAN25G0057 Fragaria x ananassa HOM05D005156 ORTHO05D006710 3.0e-129 465.7 332 73.5
BcaC05g27410 Brassica carinata HOM05D005156 ORTHO05D006710 3.9e-129 465.3 330 74.2
EL10Ac4g10175 Beta vulgaris HOM05D005156 ORTHO05D006710 6.7e-129 464.5 330 74.8
Carub.0001s3958 Capsella rubella HOM05D005156 ORTHO05D006710 8.7e-129 464.2 330 73.9
BcaB02g11155 Brassica carinata HOM05D005156 ORTHO05D006710 1.5e-128 463.4 326 74.2
Phvul.011G080400 Phaseolus vulgaris HOM05D005156 ORTHO05D006710 2.5e-128 462.6 332 72.0
CARHR040540 Cardamine hirsuta HOM05D005156 ORTHO05D006710 3.3e-128 462.2 331 73.4
AT1G50510 Arabidopsis thaliana HOM05D005156 ORTHO05D006710 4.3e-128 461.8 331 73.1
FAN11G0102 Fragaria x ananassa HOM05D005156 ORTHO05D006710 4.3e-128 461.8 332 72.9
Ah.06g194400 Amaranthus hybridus HOM05D005156 ORTHO05D006710 5.6e-128 461.5 331 73.1
ATR0751G133 Amborella trichopoda HOM05D005156 ORTHO05D006710 1.3e-127 460.3 299 77.9
AUR62000172 Chenopodium quinoa HOM05D005156 ORTHO05D006710 1.3e-127 460.3 333 72.4
MELO3C015153.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.3e-127 460.3 321 75.1
BcaC08g43222 Brassica carinata HOM05D005156 ORTHO05D006710 1.6e-127 459.9 329 72.6
BcaB07g33488 Brassica carinata HOM05D005156 ORTHO05D006710 2.1e-127 459.5 330 73.3
A05p20090 Brassica napus HOM05D005156 ORTHO05D006710 3.7e-127 458.8 332 73.8
BraA05t20917Z Brassica rapa HOM05D005156 ORTHO05D006710 3.7e-127 458.8 332 73.8
BraA06t23519Z Brassica rapa HOM05D005156 ORTHO05D006710 3.7e-127 458.8 331 73.4
THA.LOC104804468 Tarenaya hassleriana HOM05D005156 ORTHO05D006710 3.7e-127 458.8 327 73.7
VMungo1383G1089 Vigna mungo HOM05D005156 ORTHO05D006710 8.2e-127 457.6 343 71.7
Psat7g227760 Pisum sativum HOM05D005156 ORTHO05D006710 1.1e-126 457.2 338 71.0
Manes.15G112800 Manihot esculenta HOM05D005156 ORTHO05D006710 3.1e-126 455.7 273 84.6
C05p33580 Brassica napus HOM05D005156 ORTHO05D006710 6.9e-126 454.5 332 72.9
PGSC0003DMG400019760 Solanum tuberosum HOM05D005156 ORTHO05D006710 2.0e-125 453.0 333 70.9
Cc01_g05890 Coffea canephora HOM05D005156 ORTHO05D006710 3.4e-125 452.2 312 75.6
Solyc11g033260.2 Solanum lycopersicum HOM05D005156 ORTHO05D006710 1.0e-124 450.7 332 71.1
Sopen11g015730 Solanum pennellii HOM05D005156 ORTHO05D006710 1.3e-124 450.3 334 70.7
Sed0002302 Sechium edule HOM05D005156 ORTHO05D006710 2.9e-124 449.1 338 73.1
CAN.G1323.2 Capsicum annuum HOM05D005156 ORTHO05D006710 6.5e-124 448.0 331 71.3
Sp1g37360 Schrenkiella parvula HOM05D005156 ORTHO05D006710 8.4e-124 447.6 330 72.4
Nitab4.5_0006419g0030 Nicotiana tabacum HOM05D005156 ORTHO05D006710 5.5e-123 444.9 340 70.0
Rhsim13G0216600 Rhododendron simsii HOM05D005156 ORTHO05D006710 3.5e-122 442.2 352 69.0
Sabra16G0154700 Salix brachista HOM05D005156 ORTHO05D006710 1.0e-121 440.7 315 75.2
arahy.Tifrunner.gnm1.ann1.9TL5ZW Arachis hypogaea HOM05D005156 ORTHO05D006710 2.3e-121 439.5 333 71.8
arahy.Tifrunner.gnm1.ann1.KCM926 Arachis hypogaea HOM05D005156 ORTHO05D006710 2.3e-121 439.5 333 71.8
unitig_90.g27461 Utricularia gibba HOM05D005156 ORTHO05D006710 8.7e-121 437.6 330 71.8
AUR62039839 Chenopodium quinoa HOM05D005156 ORTHO05D006710 1.5e-120 436.8 363 65.8
Ca_12758_v3 Cicer arietinum L. HOM05D005156 ORTHO05D006710 1.9e-120 436.4 362 68.2
HanXRQChr06g0183211 Helianthus annuus HOM05D005156 ORTHO05D006710 2.5e-120 436.0 310 71.0
Peaxi162Scf00473g00218 Petunia axillaris HOM05D005156 ORTHO05D006710 5.7e-120 434.9 366 65.6
ClCG03G012920 Citrullus lanatus HOM05D005156 ORTHO05D006710 1.3e-119 433.7 371 65.5
BolC5t32085H Brassica oleracea HOM05D005156 ORTHO05D006710 1.6e-119 433.3 366 65.6
Hund21990 Selenicereus undatus HOM05D005156 ORTHO05D006710 8.2e-119 431.0 336 69.3
A06p03060 Brassica napus HOM05D005156 ORTHO05D006710 4.1e-118 428.7 309 73.1
Os08g0504400 Oryza sativa ssp. japonica HOM05D005156 ORTHO05D006710 2.0e-117 426.4 292 76.4
vmacro04002 Vaccinium macrocarpon HOM05D005156 ORTHO05D006710 7.7e-117 424.5 402 60.9
C06p05700 Brassica napus HOM05D005156 ORTHO05D006710 5.0e-116 421.8 308 71.8
SMO147G0151 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 8.5e-116 421.0 301 71.4
Lsat_1_v5_gn_2_29420 Lactuca sativa HOM05D005156 ORTHO05D006710 2.5e-115 419.5 340 64.4
CDE12G0606 Ceratophyllum demersum HOM05D005156 ORTHO05D006710 6.1e-114 414.8 266 80.1
Mapoly0048s0046 Marchantia polymorpha HOM05D005156 ORTHO05D006710 3.9e-113 412.1 299 69.9
Nitab4.5_0002113g0190 Nicotiana tabacum HOM05D005156 ORTHO05D006710 9.7e-112 407.5 273 75.8
Aqoxy4G00402 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 6.3e-111 404.8 330 69.1
Aa31LG10G3780 Aethionema arabicum HOM05D005156 ORTHO05D006710 5.3e-110 401.7 295 71.9
Lj2C655T2 Lonicera japonica HOM05D005156 ORTHO05D006710 1.2e-109 400.6 303 71.0
Pp3c21_8650 Physcomitrium patens HOM05D005156 ORTHO05D006710 4.5e-109 398.7 302 67.5
Zm00001eb251060 Zea mays HOM05D005156 ORTHO05D006710 5.5e-107 391.7 248 77.4
CBR_g12801 Chara braunii HOM05D005156 ORTHO05D006710 1.4e-105 387.1 310 65.5
DCAR_002091 Daucus carota HOM05D005156 ORTHO05D006710 7.4e-104 381.3 305 67.5
Dinv22149 Davidia involucrata HOM05D005156 ORTHO05D006710 1.3e-103 380.6 242 79.8
AagrBONN_evm.TU.Sc2ySwM_368.760 Anthoceros agrestis HOM05D005156 ORTHO05D006710 1.1e-102 377.5 300 66.3
SHI21395 Sapria himalayana HOM05D005156 ORTHO05D006710 7.7e-101 371.3 274 71.9
MCO15G168 Micromonas commoda HOM05D005156 ORTHO05D006710 3.7e-95 352.4 302 59.3
SGA_v2.0_scaffold29G12276 Striga asiatica HOM05D005156 ORTHO05D006710 1.1e-94 350.9 214 83.2
PRCOL_00003626 Prasinoderma coloniale HOM05D005156 ORTHO05D006710 2.9e-92 342.8 307 57.3
MBI15_g27827_MAGBIO Magnolia biondii HOM05D005156 ORTHO05D006710 1.0e-89 334.3 204 82.4
Lj2C684T3 Lonicera japonica HOM05D005156 ORTHO05D006710 1.5e-88 330.5 235 75.7
Medtr4g031220 Medicago truncatula HOM05D005156 ORTHO05D006710 3.1e-86 322.8 232 73.7
Hma1.2p1_2309F.1_g319520 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 4.1e-86 322.4 209 77.5
Cre02.g144000 Chlamydomonas reinhardtii HOM05D005156 ORTHO05D006710 6.1e-82 308.5 271 59.4
SMO273G0012 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 5.4e-78 295.4 207 72.9
Nn1g08054 Nelumbo nucifera HOM05D005156 ORTHO05D006710 1.6e-74 283.9 168 86.3
BcaB02g11038 Brassica carinata HOM05D005156 ORTHO05D006710 4.4e-72 275.8 198 74.2
BcaB01g01392 Brassica carinata HOM05D005156 ORTHO05D006710 9.5e-67 258.1 199 71.4
Cfa025164 Carpinus fangiana HOM05D005156 ORTHO05D006710 5.4e-62 242.3 331 42.3
Nn1g08053 Nelumbo nucifera HOM05D005156 ORTHO05D006710 5.6e-51 205.7 147 73.5
Haze_26247 Corylus avellana HOM05D005156 ORTHO05D006710 2.7e-45 186.8 286 41.3
COL.COLO4_04116 Corchorus olitorius HOM05D005156 ORTHO05D006710 1.2e-42 177.9 139 69.8
Medtr4g031235 Medicago truncatula HOM05D005156 ORTHO05D006710 4.3e-35 152.9 104 73.1
SMO147G0118 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 1.6e-29 134.4 247 40.1
Aqoxy1G04277 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 1.7e-28 131.0 95 73.7
ATR0585G005 Amborella trichopoda HOM05D005156 ORTHO05D006710 3.3e-27 126.7 90 70.0
Oeu016690.1 Olea europaea HOM05D005156 ORTHO05D006710 1.6e-26 124.4 224 38.8
EL10Ac8g19800 Beta vulgaris HOM05D005156 ORTHO05D006710 2.8e-26 123.6 111 60.4
SalBow6G0988 Salvia bowleyana HOM05D005156 ORTHO05D006710 5.4e-22 109.4 79 68.4
SMO164G0249 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 1.3e-20 104.8 118 55.1
SMO147G0310 Selaginella moellendorffii HOM05D000066 ORTHO05D373802 9.6e-19 98.6 103 52.4
SEGI_37101 Sequoiadendron giganteum HOM05D005156 ORTHO05D006710 1.3e-18 98.2 91 58.2
EL10Ac3g06833 Beta vulgaris HOM05D005156 ORTHO05D006710 4.8e-18 96.3 81 56.8
EL10Ac2g04378 Beta vulgaris HOM05D005156 ORTHO05D006710 6.2e-18 95.9 84 54.8
MELO3C033715.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.8e-17 94.4 61 75.4
MELO3C034160.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.8e-17 94.4 62 75.8
MELO3C030656.2 Cucumis melo HOM05D005156 ORTHO05D006710 3.1e-17 93.6 62 77.4
MELO3C034654.2 Cucumis melo HOM05D005156 ORTHO05D006710 3.1e-17 93.6 62 79.0
MELO3C030457.2 Cucumis melo HOM05D005156 ORTHO05D006710 2.5e-14 84.0 56 78.6
MELO3C016526.2 Cucumis melo HOM05D005156 ORTHO05D006710 7.1e-14 82.4 55 78.2
Hma1.2p1_1115F.1_g258870 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 3.3e-11 73.6 37 86.5
SMO147G0023 Selaginella moellendorffii HOM05D005156 ORTHO05D376049 4.1e-09 66.6 125 37.6
EL10Ac2g02892 Beta vulgaris HOM05D005156 ORTHO05D039042 6.9e-09 65.9 42 73.8
EL10Ac8g20129 Beta vulgaris HOM05D005156 ORTHO05D000004 9.0e-09 65.5 117 39.3
EL10As2g23197 Beta vulgaris HOM05D005156 ORTHO05D039042 3.4e-08 63.5 41 73.2
EL10Ac9g22728 Beta vulgaris HOM05D005156 ORTHO05D000004 7.6e-08 62.4 35 82.9
Rhsim05G0077000 Rhododendron simsii HOM05D003003 ORTHO05D008343 1.9e-06 57.8 39 74.4
Rhsim07G0166700 Rhododendron simsii HOM05D005156 ORTHO05D050672 1.9e-06 57.8 69 47.8


User provided reference genes

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