Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0577 Papaver somniferum HOM05D004194 ORTHO05D005641 2.8e-299 1031.2 523 100.0
PSO170G4697 Papaver somniferum HOM05D004194 ORTHO05D005641 3.9e-293 1010.7 523 98.1
TAR625G0434 Trochodendron aralioides HOM05D004194 ORTHO05D005641 3.7e-235 818.1 521 79.3
TAR381G0874 Trochodendron aralioides HOM05D004194 ORTHO05D005641 6.4e-235 817.4 515 80.0
vmacro17477 Vaccinium macrocarpon HOM05D004194 ORTHO05D005641 4.1e-234 814.7 471 84.5
Solyc04g076320.4 Solanum lycopersicum HOM05D004194 ORTHO05D005641 1.9e-231 805.8 519 78.4
Sopen04g030120 Solanum pennellii HOM05D004194 ORTHO05D005641 4.3e-231 804.7 519 78.4
Aqoxy6G00868 Aquilegia oxysepala HOM05D004194 ORTHO05D005641 7.3e-231 803.9 503 81.5
vmacro21340 Vaccinium macrocarpon HOM05D004194 ORTHO05D005641 9.5e-231 803.5 479 82.5
CiPaw.07G165400 Carya illinoinensis HOM05D004194 ORTHO05D005641 1.2e-230 803.1 480 83.1
Nn5g29879 Nelumbo nucifera HOM05D004194 ORTHO05D005641 1.2e-230 803.1 518 78.4
Hma1.2p1_0010F.1_g006650 Hydrangea macrophylla HOM05D004194 ORTHO05D005641 4.7e-230 801.2 460 85.7
CDE01G0047 Ceratophyllum demersum HOM05D004194 ORTHO05D005641 8.1e-230 800.4 480 82.7
AUR62004928 Chenopodium quinoa HOM05D004194 ORTHO05D005641 1.8e-229 799.3 464 84.3
Thecc.08G071000 Theobroma cacao HOM05D004194 ORTHO05D005641 2.3e-229 798.9 467 83.3
Manes.18G058500 Manihot esculenta HOM05D004194 ORTHO05D005641 5.2e-229 797.7 472 82.6
CDE02G0818 Ceratophyllum demersum HOM05D004194 ORTHO05D005641 6.8e-229 797.3 480 82.5
DCAR_012855 Daucus carota HOM05D004194 ORTHO05D005641 6.8e-229 797.3 466 84.5
PGSC0003DMG400009343 Solanum tuberosum HOM05D004194 ORTHO05D005641 6.8e-229 797.3 537 76.2
AUR62001023 Chenopodium quinoa HOM05D004194 ORTHO05D005641 1.5e-228 796.2 482 81.5
QL09p017817 Quercus lobata HOM05D004194 ORTHO05D005641 1.5e-228 796.2 515 78.3
Cfa013797 Carpinus fangiana HOM05D004194 ORTHO05D005641 7.5e-228 793.9 479 81.8
Cpa.g.sc21.21 Carica papaya HOM05D004194 ORTHO05D005641 2.2e-227 792.3 468 82.3
PGR042G2811 Punica granatum HOM05D004194 ORTHO05D005641 3.7e-227 791.6 474 81.2
Actinidia10274 Actinidia chinensis HOM05D004194 ORTHO05D005641 8.3e-227 790.4 464 83.6
Haze_22460 Corylus avellana HOM05D004194 ORTHO05D005641 8.3e-227 790.4 478 81.6
Ciclev10000871m.g Citrus clementina HOM05D004194 ORTHO05D005641 1.1e-226 790.0 465 83.2
Gorai.002G139300 Gossypium raimondii HOM05D004194 ORTHO05D005641 2.4e-226 788.9 467 82.2
Rhsim06G0071600 Rhododendron simsii HOM05D004194 ORTHO05D005641 2.4e-226 788.9 475 82.1
Gohir.A01G126900 Gossypium hirsutum HOM05D004194 ORTHO05D005641 3.2e-226 788.5 467 82.0
Peaxi162Scf00454g00416 Petunia axillaris HOM05D004194 ORTHO05D005641 4.1e-226 788.1 460 84.3
Duzib093G0846 Durio zibethinus HOM05D004194 ORTHO05D005641 5.4e-226 787.7 467 81.4
Atru.chr13.1009 Acer truncatum HOM05D004194 ORTHO05D005641 7.1e-226 787.3 460 83.5
CAN.G475.29 Capsicum annuum HOM05D004194 ORTHO05D005641 9.2e-226 786.9 460 83.7
GSVIVG01009181001 Vitis vinifera HOM05D004194 ORTHO05D005641 9.2e-226 786.9 460 83.7
Gohir.D01G114300 Gossypium hirsutum HOM05D004194 ORTHO05D005641 1.2e-225 786.6 467 81.8
TWI12G1457 Tripterygium wilfordii HOM05D004194 ORTHO05D005641 1.2e-225 786.6 485 80.0
RcHm_v2.0_Chr7g0216141 Rosa chinensis HOM05D004194 ORTHO05D005641 2.1e-225 785.8 464 83.4
Hund21605 Selenicereus undatus HOM05D004194 ORTHO05D005641 2.7e-225 785.4 462 82.5
FvH4_5g34710 Fragaria vesca HOM05D004194 ORTHO05D005641 3.5e-225 785.0 457 84.5
Glyma.04G094600 Glycine max HOM05D004194 ORTHO05D005641 3.5e-225 785.0 459 82.4
EL10Ac4g09117 Beta vulgaris HOM05D004194 ORTHO05D005641 4.6e-225 784.6 474 81.6
CSS0028335 Camellia sinensis var. sinensis HOM05D004194 ORTHO05D005641 4.6e-225 784.6 483 81.2
Lj4A737T61 Lonicera japonica HOM05D004194 ORTHO05D005641 1.7e-224 782.7 464 82.3
ATR0767G266 Amborella trichopoda HOM05D004194 ORTHO05D005641 2.3e-224 782.3 462 81.6
Glyma.06G096700 Glycine max HOM05D004194 ORTHO05D005641 2.3e-224 782.3 471 80.5
Lalb_Chr11g0064971 Lupinus albus HOM05D004194 ORTHO05D005641 2.3e-224 782.3 478 79.7
Prupe.1G532200 Prunus persica HOM05D004194 ORTHO05D005641 3.0e-224 781.9 459 84.3
Cc10_g15890 Coffea canephora HOM05D004194 ORTHO05D005641 1.1e-223 780.0 474 80.0
Eucgr.F02151 Eucalyptus grandis HOM05D004194 ORTHO05D005641 1.5e-223 779.6 474 79.7
MD12G1008900 Malus domestica HOM05D004194 ORTHO05D005641 1.5e-223 779.6 460 83.7
Lj1g0000709 Lotus japonicus HOM05D004194 ORTHO05D005641 1.9e-223 779.2 461 82.0
Medtr3g100220 Medicago truncatula HOM05D004194 ORTHO05D005641 1.9e-223 779.2 517 74.7
FAN13G1619 Fragaria x ananassa HOM05D004194 ORTHO05D005641 4.3e-223 778.1 516 76.4
VMungo1309G1669 Vigna mungo HOM05D004194 ORTHO05D005641 9.5e-223 776.9 459 81.0
MELO3C003523.2 Cucumis melo HOM05D004194 ORTHO05D005641 2.1e-222 775.8 471 80.0
Ca_23440_v3 Cicer arietinum L. HOM05D004194 ORTHO05D005641 3.6e-222 775.0 459 81.0
FAN08G1093 Fragaria x ananassa HOM05D004194 ORTHO05D005641 1.1e-221 773.5 552 71.7
CsaV3_3G047990 Cucumis sativus L. HOM05D004194 ORTHO05D005641 2.3e-221 772.3 471 79.6
TPR.G6303 Trifolium pratense HOM05D004194 ORTHO05D005641 2.3e-221 772.3 459 81.3
MSTRG.28070 Avicennia marina HOM05D004194 ORTHO05D005641 3.1e-221 771.9 461 82.9
Phvul.002G296600 Phaseolus vulgaris HOM05D004194 ORTHO05D005641 3.1e-221 771.9 459 80.4
Sed0019515 Sechium edule HOM05D004194 ORTHO05D005641 1.2e-220 770.0 461 80.7
ECA232G1743 Erigeron canadensis HOM05D004194 ORTHO05D005641 2.6e-220 768.8 460 81.3
FAN04G1572 Fragaria x ananassa HOM05D004194 ORTHO05D005641 3.4e-220 768.5 552 71.6
Potri.002G106200 Populus trichocarpa HOM05D004194 ORTHO05D005641 5.8e-220 767.7 489 77.7
Sed0011017 Sechium edule HOM05D004194 ORTHO05D005641 5.8e-220 767.7 473 79.1
Hund09317 Selenicereus undatus HOM05D004194 ORTHO05D005641 7.6e-220 767.3 474 80.4
ClCG08G011660 Citrullus lanatus HOM05D004194 ORTHO05D005641 1.3e-219 766.5 486 77.2
CsaV3_2G030250 Cucumis sativus L. HOM05D004194 ORTHO05D005641 2.2e-219 765.8 476 77.5
CANSAT21G1481 Cannabis sativa HOM05D004194 ORTHO05D005641 3.8e-219 765.0 492 77.2
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 8.4e-219 763.8 459 80.8
FAN18G1922 Fragaria x ananassa HOM05D004194 ORTHO05D005641 8.4e-219 763.8 536 73.3
arahy.Tifrunner.gnm1.ann1.S0XZCZ Arachis hypogaea HOM05D004194 ORTHO05D005641 1.4e-218 763.1 467 78.6
SalBow6G2182 Salvia bowleyana HOM05D004194 ORTHO05D005641 1.4e-218 763.1 463 80.8
A10p26770 Brassica napus HOM05D004194 ORTHO05D005641 1.9e-218 762.7 459 80.8
Lsat_1_v5_gn_9_75040 Lactuca sativa HOM05D004194 ORTHO05D005641 1.9e-218 762.7 460 81.3
BcaNung01903 Brassica carinata HOM05D004194 ORTHO05D005641 3.2e-218 761.9 514 74.5
Sp6g32570 Schrenkiella parvula HOM05D004194 ORTHO05D005641 4.1e-218 761.5 459 80.4
C09p65910 Brassica napus HOM05D004194 ORTHO05D005641 2.7e-217 758.8 459 80.4
THA.LOC104799791 Tarenaya hassleriana HOM05D004194 ORTHO05D005641 2.7e-217 758.8 459 80.4
CARHR202370 Cardamine hirsuta HOM05D004194 ORTHO05D005641 3.5e-217 758.4 459 80.2
BolC9t59414H Brassica oleracea HOM05D004194 ORTHO05D005641 6.0e-217 757.7 459 80.2
Lsat_1_v5_gn_6_104960 Lactuca sativa HOM05D004194 ORTHO05D005641 7.8e-217 757.3 457 81.2
MBI16_g12466_MAGBIO Magnolia biondii HOM05D004194 ORTHO05D005641 1.0e-216 756.9 469 81.4
Thhalv10013269m.g Eutrema salsugineum HOM05D004194 ORTHO05D005641 5.1e-216 754.6 459 79.5
THA.LOC104806871 Tarenaya hassleriana HOM05D004194 ORTHO05D005641 5.1e-216 754.6 459 80.2
AL6G21480 Arabidopsis lyrata HOM05D004194 ORTHO05D005641 1.1e-215 753.4 459 79.7
Carub.0006s0941 Capsella rubella HOM05D004194 ORTHO05D005641 2.5e-215 752.3 459 79.7
AT5G10920 Arabidopsis thaliana HOM05D004194 ORTHO05D005641 5.6e-215 751.1 459 79.3
Psat5g048920 Pisum sativum HOM05D004194 ORTHO05D005641 9.6e-215 750.4 517 71.8
SalBow8G0776 Salvia bowleyana HOM05D004194 ORTHO05D005641 9.6e-215 750.4 485 77.1
CANSAT21G2248 Cannabis sativa HOM05D004194 ORTHO05D005641 2.8e-214 748.8 492 76.4
SGA_v2.0_scaffold5G02969 Striga asiatica HOM05D004194 ORTHO05D005641 2.4e-213 745.7 518 73.0
arahy.Tifrunner.gnm1.ann1.N12FQY Arachis hypogaea HOM05D004194 ORTHO05D005641 5.2e-213 744.6 500 73.2
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 2.6e-212 742.3 486 75.7
MELO3C011085.2 Cucumis melo HOM05D004194 ORTHO05D005641 3.8e-211 738.4 482 75.1
Sabra02G0083500 Salix brachista HOM05D004194 ORTHO05D005641 2.4e-210 735.7 515 72.2
SMO143G0205 Selaginella moellendorffii HOM05D004194 ORTHO05D005641 3.2e-210 735.3 458 76.4
Zm00001eb396370 Zea mays HOM05D004194 ORTHO05D005641 1.2e-209 733.4 490 74.3
unitig_578.g16695 Utricularia gibba HOM05D004194 ORTHO05D005641 6.0e-209 731.1 486 75.5
ClCG11G014580 Citrullus lanatus HOM05D004194 ORTHO05D005641 1.9e-207 726.1 481 75.7
Pp3c18_13220 Physcomitrium patens HOM05D004194 ORTHO05D005641 3.1e-205 718.8 472 73.1
Mapoly0005s0193 Marchantia polymorpha HOM05D004194 ORTHO05D005641 6.9e-205 717.6 473 73.6
AagrBONN_evm.TU.Sc2ySwM_362.1891 Anthoceros agrestis HOM05D004194 ORTHO05D005641 1.3e-203 713.4 470 73.0
COL.COLO4_35249 Corchorus olitorius HOM05D004194 ORTHO05D005641 1.3e-203 713.4 467 76.7
Ah.06g192260 Amaranthus hybridus HOM05D004194 ORTHO05D005641 1.9e-202 709.5 413 83.1
CBR_g48741 Chara braunii HOM05D004194 ORTHO05D005641 4.6e-201 704.9 476 72.3
SGA_v2.0_scaffold24G10675 Striga asiatica HOM05D004194 ORTHO05D005641 5.1e-200 701.4 484 73.6
HPP92_001058 Vanilla planifolia HOM05D004194 ORTHO05D005641 3.1e-197 692.2 460 74.8
SHI09678 Sapria himalayana HOM05D004194 ORTHO05D005641 2.0e-196 689.5 466 72.5
Os03g0305500 Oryza sativa ssp. japonica HOM05D004194 ORTHO05D005641 1.9e-194 682.9 429 78.3
Migut.N01596 Erythranthe guttata HOM05D004194 ORTHO05D005641 7.1e-194 681.0 461 74.0
Nitab4.5_0010888g0020 Nicotiana tabacum HOM05D004194 ORTHO05D005641 1.3e-190 670.2 382 86.6
Dinv42612 Davidia involucrata HOM05D004194 ORTHO05D005641 4.8e-190 668.3 378 87.8
Nitab4.5_0000131g0240 Nicotiana tabacum HOM05D004194 ORTHO05D005641 1.4e-189 666.8 439 77.4
Phvul.009G036600 Phaseolus vulgaris HOM05D004194 ORTHO05D005641 2.1e-185 652.9 373 83.1
MD14G1006200 Malus domestica HOM05D004194 ORTHO05D005641 2.7e-185 652.5 462 72.9
BcaC01g05557 Brassica carinata HOM05D004194 ORTHO05D005641 4.3e-183 645.2 472 69.5
Lalb_Chr08g0242531 Lupinus albus HOM05D004194 ORTHO05D005641 7.4e-183 644.4 373 82.3
BcaC03g13340 Brassica carinata HOM05D004194 ORTHO05D005641 1.3e-182 643.7 459 73.0
PRCOL_00005568 Prasinoderma coloniale HOM05D004194 ORTHO05D005641 6.9e-181 637.9 453 67.3
HanXRQChr15g0484861 Helianthus annuus HOM05D004194 ORTHO05D005641 1.8e-176 623.2 737 48.8
BolC2t06434H Brassica oleracea HOM05D004194 ORTHO05D005641 6.3e-174 614.8 457 70.7
MD14G1006400 Malus domestica HOM05D004194 ORTHO05D005641 3.1e-173 612.5 378 81.7
C03p24950 Brassica napus HOM05D004194 ORTHO05D005641 1.1e-170 604.0 472 66.3
BcaC04g19277 Brassica carinata HOM05D004194 ORTHO05D005641 4.7e-169 598.6 425 70.8
Sc11g0003910 Simmondsia chinensis HOM05D004194 ORTHO05D005641 6.1e-161 571.6 373 78.0
Actinidia33569 Actinidia chinensis HOM05D004194 ORTHO05D005641 1.2e-153 547.4 394 72.8
BcaNung01905 Brassica carinata HOM05D004194 ORTHO05D005641 4.6e-116 422.5 371 63.3
Oeu049772.1 Olea europaea HOM05D004194 ORTHO05D005641 3.3e-114 416.4 238 84.5
Lj4C718T1 Lonicera japonica HOM05D004194 ORTHO05D005641 2.0e-111 407.1 252 80.6
Sed0012940 Sechium edule HOM05D004194 ORTHO05D005641 4.2e-101 372.9 292 64.0
C02p04750 Brassica napus HOM05D004194 ORTHO05D005641 1.3e-94 351.3 247 74.5
MCO11G430 Micromonas commoda HOM05D004194 ORTHO05D005641 1.7e-94 350.9 465 41.7
HPP92_001149 Vanilla planifolia HOM05D004194 ORTHO05D005641 5.1e-91 339.3 201 82.1
Cre01.g021251 Chlamydomonas reinhardtii HOM05D004194 ORTHO05D005641 6.2e-89 332.4 485 38.6
Cfa022469 Carpinus fangiana HOM05D004194 ORTHO05D005641 1.2e-87 328.2 459 40.5
Oeu049771.1 Olea europaea HOM05D004194 ORTHO05D005641 3.5e-76 290.0 225 66.2
Ah.06g192250 Amaranthus hybridus HOM05D004194 ORTHO05D005641 2.3e-67 260.8 400 42.0
arahy.Tifrunner.gnm1.ann1.1M3GV3 Arachis hypogaea HOM05D004194 ORTHO05D005641 1.9e-61 241.1 131 86.3
PSO478G2000 Papaver somniferum HOM05D004194 ORTHO05D005641 4.6e-60 236.5 196 66.8
Oeu035352.1 Olea europaea HOM05D004194 ORTHO05D005641 3.1e-56 223.8 195 61.5
Psat6g188680 Pisum sativum HOM05D004194 ORTHO05D005641 3.8e-54 216.9 170 61.8
A02p00760 Brassica napus HOM05D004194 ORTHO05D005641 3.2e-53 213.8 165 67.9
SEGI_11237 Sequoiadendron giganteum HOM05D004194 ORTHO05D005641 6.5e-46 189.5 98 91.8
BcaB01g03715 Brassica carinata HOM05D004194 ORTHO05D005641 3.2e-45 187.2 249 45.4
C02p04760 Brassica napus HOM05D004194 ORTHO05D005641 2.7e-44 184.1 131 64.9
SEGI_18549 Sequoiadendron giganteum HOM05D004194 ORTHO05D005641 2.7e-44 184.1 121 67.8
Oeu028023.1 Olea europaea HOM05D004194 ORTHO05D033851 2.6e-39 167.5 90 91.1
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.0e-38 165.6 378 29.9
Psat6g188720 Pisum sativum HOM05D001289 ORTHO05D005641 2.5e-37 161.0 122 64.8
PSO349G0016 Papaver somniferum HOM05D004194 ORTHO05D005641 7.2e-37 159.5 80 97.5
A02p00750 Brassica napus HOM05D004194 ORTHO05D005641 4.5e-31 140.2 93 79.6
Actinidia19243 Actinidia chinensis HOM05D004194 ORTHO05D005641 1.2e-28 132.1 124 52.4
VMungo1127G2164 Vigna mungo HOM05D004194 ORTHO05D007986 2.1e-28 131.3 111 61.3
BraA02t05060Z Brassica rapa HOM05D004194 ORTHO05D033851 3.6e-28 130.6 74 86.5
Aqoxy84s004 Aquilegia oxysepala HOM05D004194 ORTHO05D077318 4.0e-27 127.1 290 29.3
VMungo0331G0568 Vigna mungo HOM05D004194 ORTHO05D007986 6.8e-27 126.3 91 67.0
BcaNung01906 Brassica carinata HOM05D004194 ORTHO05D005641 4.1e-16 90.5 56 69.6
Psat6g163800 Pisum sativum HOM05D004194 ORTHO05D037373 1.0e-11 75.9 67 53.7
Psat2g086120 Pisum sativum HOM05D004194 ORTHO05D037373 3.1e-11 74.3 47 70.2
Sed0027437 Sechium edule HOM05D004194 ORTHO05D033851 3.1e-11 74.3 40 82.5
RcHm_v2.0_Chr6g0244231 Rosa chinensis HOM05D004194 ORTHO05D341107 4.1e-08 63.9 61 57.4
Psat3g096720 Pisum sativum HOM05D004194 ORTHO05D324018 4.6e-07 60.5 35 74.3
Psat5g254960 Pisum sativum HOM05D015311 ORTHO05D321322 1.0e-06 59.3 38 73.7
Psat2g086160 Pisum sativum HOM05D004194 ORTHO05D037373 6.6e-06 56.6 34 73.5


User provided reference genes

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